Protein–RNA interactions for Protein: Q8TCU4

ALMS1, Alstrom syndrome protein 1, humanhuman

Predictions only

Length 4,167 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ALMS1Q8TCU4 AL139089.1-201ENST00000620372 975 ntBASIC2.5□□□□□ -2.01
ALMS1Q8TCU4 FIGNL1-212ENST00000613602 3187 ntAPPRIS P1 TSL 5 BASIC2.5□□□□□ -2.01
ALMS1Q8TCU4 Z95331.1-201ENST00000623075 23112 ntBASIC2.5□□□□□ -2.01
ALMS1Q8TCU4 WNK3-202ENST00000375159 5403 ntAPPRIS P3 TSL 1 (best) BASIC2.5□□□□□ -2.01
ALMS1Q8TCU4 QSER1-204ENST00000527788 5052 ntTSL 2 BASIC2.5□□□□□ -2.01
ALMS1Q8TCU4 RNA5SP50-201ENST00000363731 107 ntBASIC2.5□□□□□ -2.01
ALMS1Q8TCU4 XGY1-201ENST00000381172 446 ntBASIC2.5□□□□□ -2.01
ALMS1Q8TCU4 RNU2-22P-201ENST00000411266 212 ntBASIC2.5□□□□□ -2.01
ALMS1Q8TCU4 SKP1P3-201ENST00000429280 487 ntBASIC2.5□□□□□ -2.01
ALMS1Q8TCU4 ARL6IP1P2-201ENST00000431356 563 ntBASIC2.5□□□□□ -2.01
ALMS1Q8TCU4 LINC01773-201ENST00000437598 787 ntTSL 2 BASIC2.5□□□□□ -2.01
ALMS1Q8TCU4 MTND6P32-201ENST00000457611 483 ntBASIC2.5□□□□□ -2.01
ALMS1Q8TCU4 GS1-279B7.1-203ENST00000565520 609 ntTSL 5 BASIC2.5□□□□□ -2.01
ALMS1Q8TCU4 AC079298.2-201ENST00000623885 459 ntBASIC2.5□□□□□ -2.01
ALMS1Q8TCU4 ECHDC1-222ENST00000531967 2585 ntAPPRIS ALT2 TSL 2 BASIC2.5□□□□□ -2.01
ALMS1Q8TCU4 MLF1-208ENST00000478894 1372 ntTSL 2 BASIC2.5□□□□□ -2.01
ALMS1Q8TCU4 GAS2L3-202ENST00000537247 2742 ntTSL 2 BASIC2.5□□□□□ -2.01
ALMS1Q8TCU4 SNORA80A-201ENST00000363922 136 ntBASIC2.5□□□□□ -2.01
ALMS1Q8TCU4 Z98941.1-201ENST00000407764 100 ntBASIC2.5□□□□□ -2.01
ALMS1Q8TCU4 BX119904.1-201ENST00000432026 348 ntBASIC2.5□□□□□ -2.01
ALMS1Q8TCU4 AC026353.1-201ENST00000470523 558 ntTSL 2 BASIC2.5□□□□□ -2.01
ALMS1Q8TCU4 RHOBTB3-204ENST00000504179 883 ntTSL 5 BASIC2.5□□□□□ -2.01
ALMS1Q8TCU4 IGKV2-38-201ENST00000517443 247 ntBASIC2.5□□□□□ -2.01
ALMS1Q8TCU4 MEG8-215ENST00000555354 469 ntTSL 3 BASIC2.5□□□□□ -2.01
ALMS1Q8TCU4 AC013565.1-201ENST00000565938 597 ntTSL 2 BASIC2.5□□□□□ -2.01
ALMS1Q8TCU4 UGT2B4-207ENST00000639621 1154 ntTSL 5 BASIC2.5□□□□□ -2.01
ALMS1Q8TCU4 CCNE2-202ENST00000396133 1361 ntTSL 1 (best) BASIC2.49□□□□□ -2.01
ALMS1Q8TCU4 IBTK-209ENST00000510291 4109 ntTSL 1 (best) BASIC2.49□□□□□ -2.01
ALMS1Q8TCU4 ZNF285-205ENST00000614994 6012 ntAPPRIS P3 TSL 1 (best) BASIC2.49□□□□□ -2.01
ALMS1Q8TCU4 AP002512.4-201ENST00000641310 4672 ntAPPRIS P1 BASIC2.49□□□□□ -2.01
ALMS1Q8TCU4 TPTE2-201ENST00000255310 1562 ntTSL 5 BASIC2.49□□□□□ -2.01
ALMS1Q8TCU4 AL158071.1-201ENST00000430315 461 ntBASIC2.49□□□□□ -2.01
ALMS1Q8TCU4 STK33-208ENST00000447869 3103 ntAPPRIS P1 TSL 1 (best) BASIC2.49□□□□□ -2.01
ALMS1Q8TCU4 AC026355.2-201ENST00000456755 723 ntTSL 2 BASIC2.49□□□□□ -2.01
ALMS1Q8TCU4 AC097504.1-201ENST00000515103 2415 ntBASIC2.49□□□□□ -2.01
ALMS1Q8TCU4 AC079209.2-201ENST00000519107 431 ntTSL 3 BASIC2.49□□□□□ -2.01
ALMS1Q8TCU4 AC090802.1-201ENST00000520870 445 ntTSL 2 BASIC2.49□□□□□ -2.01
ALMS1Q8TCU4 SNHG1-219ENST00000542112 780 ntTSL 3 BASIC2.49□□□□□ -2.01
ALMS1Q8TCU4 AC135178.3-204ENST00000585181 451 ntTSL 2 BASIC2.49□□□□□ -2.01
ALMS1Q8TCU4 AC021517.1-203ENST00000590257 421 ntTSL 3 BASIC2.49□□□□□ -2.01
ALMS1Q8TCU4 LINC01081-201ENST00000597373 465 ntTSL 5 BASIC2.49□□□□□ -2.01
ALMS1Q8TCU4 AC013412.1-201ENST00000610687 192 ntBASIC2.49□□□□□ -2.01
ALMS1Q8TCU4 AC006840.1-201ENST00000623069 542 ntBASIC2.49□□□□□ -2.01
ALMS1Q8TCU4 RMDN2-AS1-204ENST00000626669 448 ntTSL 5 BASIC2.49□□□□□ -2.01
ALMS1Q8TCU4 CUBN-202ENST00000377833 11949 ntAPPRIS P1 TSL 1 (best) BASIC2.49□□□□□ -2.01
ALMS1Q8TCU4 KAT6B-201ENST00000287239 8287 ntAPPRIS P3 TSL 1 (best) BASIC2.49□□□□□ -2.01
ALMS1Q8TCU4 PHACTR2-207ENST00000427704 9531 ntAPPRIS ALT2 TSL 1 (best) BASIC2.49□□□□□ -2.01
ALMS1Q8TCU4 AC233263.6-201ENST00000631132 1963 ntBASIC2.49□□□□□ -2.01
ALMS1Q8TCU4 STEAP2-203ENST00000394622 6612 ntAPPRIS P1 TSL 1 (best) BASIC2.49□□□□□ -2.01
ALMS1Q8TCU4 PTPRD-203ENST00000381196 9911 ntAPPRIS P1 TSL 5 BASIC2.49□□□□□ -2.01
ALMS1Q8TCU4 FAM81B-201ENST00000283357 1560 ntAPPRIS P2 TSL 1 (best) BASIC2.49□□□□□ -2.01
ALMS1Q8TCU4 ABI3BP-201ENST00000284322 4498 ntAPPRIS P2 TSL 1 (best) BASIC2.49□□□□□ -2.01
ALMS1Q8TCU4 AC092435.4-201ENST00000623012 4159 ntBASIC2.49□□□□□ -2.01
ALMS1Q8TCU4 CFL2-201ENST00000298159 6747 ntAPPRIS P1 TSL 1 (best) BASIC2.49□□□□□ -2.01
ALMS1Q8TCU4 RPL23AP48-201ENST00000406913 488 ntBASIC2.49□□□□□ -2.01
ALMS1Q8TCU4 AL445213.1-201ENST00000412589 747 ntBASIC2.49□□□□□ -2.01
ALMS1Q8TCU4 AL590302.1-201ENST00000431017 359 ntTSL 2 BASIC2.49□□□□□ -2.01
ALMS1Q8TCU4 AL121718.1-201ENST00000449463 387 ntTSL 3 BASIC2.49□□□□□ -2.01
ALMS1Q8TCU4 AC025445.1-201ENST00000502728 300 ntBASIC2.49□□□□□ -2.01
ALMS1Q8TCU4 AC025554.1-201ENST00000505641 188 ntBASIC2.49□□□□□ -2.01
ALMS1Q8TCU4 AC112198.3-201ENST00000505950 441 ntTSL 3 BASIC2.49□□□□□ -2.01
ALMS1Q8TCU4 AC091544.4-201ENST00000555268 342 ntBASIC2.49□□□□□ -2.01
ALMS1Q8TCU4 AC244517.5-202ENST00000623741 500 ntTSL 3 BASIC2.49□□□□□ -2.01
ALMS1Q8TCU4 CCNYL2-203ENST00000638057 730 ntTSL 3 BASIC2.49□□□□□ -2.01
ALMS1Q8TCU4 DCN-201ENST00000052754 7156 ntAPPRIS P1 TSL 1 (best) BASIC2.49□□□□□ -2.01
ALMS1Q8TCU4 STEAP2-205ENST00000394629 2261 ntTSL 1 (best) BASIC2.49□□□□□ -2.01
ALMS1Q8TCU4 SMARCA2-201ENST00000302401 2242 ntTSL 2 BASIC2.49□□□□□ -2.01
ALMS1Q8TCU4 OR9H1P-201ENST00000446393 4888 ntAPPRIS P1 BASIC2.49□□□□□ -2.01
ALMS1Q8TCU4 ZSCAN26-204ENST00000614088 2321 ntTSL 3 BASIC2.49□□□□□ -2.01
ALMS1Q8TCU4 AC092111.2-201ENST00000611627 1414 ntBASIC2.49□□□□□ -2.01
ALMS1Q8TCU4 OR52B1P-201ENST00000316506 909 ntBASIC2.49□□□□□ -2.01
ALMS1Q8TCU4 SNORA3C-201ENST00000408792 125 ntBASIC2.49□□□□□ -2.01
ALMS1Q8TCU4 CCRL1P1-201ENST00000449542 1053 ntBASIC2.49□□□□□ -2.01
ALMS1Q8TCU4 TEX41-209ENST00000451478 452 ntTSL 2 BASIC2.49□□□□□ -2.01
ALMS1Q8TCU4 MRPL35P4-201ENST00000453682 566 ntBASIC2.49□□□□□ -2.01
ALMS1Q8TCU4 TMEM161B-AS1-208ENST00000507736 630 ntTSL 3 BASIC2.49□□□□□ -2.01
ALMS1Q8TCU4 AP002892.1-201ENST00000537727 550 ntTSL 4 BASIC2.49□□□□□ -2.01
ALMS1Q8TCU4 GLYCAM1-202ENST00000546607 553 ntTSL 1 (best) BASIC2.49□□□□□ -2.01
ALMS1Q8TCU4 AC011611.1-201ENST00000552179 197 ntBASIC2.49□□□□□ -2.01
ALMS1Q8TCU4 MIR5186-201ENST00000577504 120 ntBASIC2.49□□□□□ -2.01
ALMS1Q8TCU4 ADGRL3-218ENST00000514996 4731 ntAPPRIS ALT2 TSL 5 BASIC2.49□□□□□ -2.01
ALMS1Q8TCU4 MLH1-212ENST00000455445 2296 ntTSL 2 BASIC2.49□□□□□ -2.01
ALMS1Q8TCU4 PRKACB-201ENST00000370680 1914 ntTSL 1 (best) BASIC2.48□□□□□ -2.01
ALMS1Q8TCU4 ZNF33A-201ENST00000307441 6196 ntAPPRIS ALT2 TSL 4 BASIC2.48□□□□□ -2.01
ALMS1Q8TCU4 AC008154.2-201ENST00000420268 414 ntTSL 3 BASIC2.48□□□□□ -2.01
ALMS1Q8TCU4 NANOGNBP1-201ENST00000448444 480 ntBASIC2.48□□□□□ -2.01
ALMS1Q8TCU4 RNU2-27P-201ENST00000516185 142 ntBASIC2.48□□□□□ -2.01
ALMS1Q8TCU4 OOSP2-203ENST00000532905 496 ntAPPRIS ALT2 TSL 3 BASIC2.48□□□□□ -2.01
ALMS1Q8TCU4 AC092747.2-201ENST00000545069 983 ntBASIC2.48□□□□□ -2.01
ALMS1Q8TCU4 AC078899.5-201ENST00000612475 178 ntBASIC2.48□□□□□ -2.01
ALMS1Q8TCU4 FAM26D-205ENST00000628083 1117 ntTSL 2 BASIC2.48□□□□□ -2.01
ALMS1Q8TCU4 AL392088.2-201ENST00000637607 285 ntBASIC2.48□□□□□ -2.01
ALMS1Q8TCU4 WNK3-205ENST00000620763 5400 ntTSL 5 BASIC2.48□□□□□ -2.01
ALMS1Q8TCU4 PLEKHA1-203ENST00000368990 14010 ntAPPRIS P1 TSL 1 (best) BASIC2.48□□□□□ -2.01
ALMS1Q8TCU4 SKP1-202ENST00000353411 9474 ntAPPRIS P4 TSL 1 (best) BASIC2.48□□□□□ -2.01
ALMS1Q8TCU4 SOX5-216ENST00000546136 6975 ntAPPRIS P3 TSL 5 BASIC2.48□□□□□ -2.01
ALMS1Q8TCU4 SLC9C1-205ENST00000487372 3979 ntAPPRIS ALT2 TSL 1 (best) BASIC2.48□□□□□ -2.01
ALMS1Q8TCU4 ERMN-204ENST00000409925 556 ntTSL 4 BASIC2.48□□□□□ -2.01
ALMS1Q8TCU4 RN7SL504P-201ENST00000494496 287 ntBASIC2.48□□□□□ -2.01
ALMS1Q8TCU4 AC139491.3-201ENST00000509643 684 ntTSL 3 BASIC2.48□□□□□ -2.01
Retrieved 100 of 98,524 protein–RNA pairs in 108.8 ms