Protein–RNA interactions for Protein: Q8N3C7

CLIP4, CAP-Gly domain-containing linker protein 4, humanhuman

Predictions only

Length 705 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP4Q8N3C7 ITCH-202ENST00000374864 6401 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
CLIP4Q8N3C7 AC016588.2-201ENST00000632484 3021 ntBASIC4.38□□□□□ -1.71
CLIP4Q8N3C7 BCLAF1-207ENST00000527759 4373 ntAPPRIS ALT2 TSL 1 (best) BASIC4.38□□□□□ -1.71
CLIP4Q8N3C7 ZNF780B-202ENST00000434248 8665 ntAPPRIS P1 TSL 5 BASIC4.38□□□□□ -1.71
CLIP4Q8N3C7 ZNF780B-207ENST00000617676 8664 ntAPPRIS P1 TSL 5 BASIC4.38□□□□□ -1.71
CLIP4Q8N3C7 CENPE-202ENST00000380026 8241 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
CLIP4Q8N3C7 BTAF1-204ENST00000544642 6938 ntAPPRIS ALT1 TSL 5 BASIC4.38□□□□□ -1.71
CLIP4Q8N3C7 CCDC169-201ENST00000239859 708 ntAPPRIS P1 TSL 5 BASIC4.38□□□□□ -1.71
CLIP4Q8N3C7 ARGLU1-202ENST00000375926 821 ntAPPRIS P1 TSL 5 BASIC4.38□□□□□ -1.71
CLIP4Q8N3C7 RNU6-157P-201ENST00000383957 107 ntBASIC4.38□□□□□ -1.71
CLIP4Q8N3C7 TRGV11-201ENST00000390340 463 ntAPPRIS P1 BASIC4.38□□□□□ -1.71
CLIP4Q8N3C7 DEFB113-201ENST00000398718 249 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
CLIP4Q8N3C7 DEFB115-201ENST00000400552 267 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
CLIP4Q8N3C7 RSL24D1P4-201ENST00000400938 484 ntBASIC4.38□□□□□ -1.71
CLIP4Q8N3C7 MIR1178-201ENST00000408396 91 ntBASIC4.38□□□□□ -1.71
CLIP4Q8N3C7 AC092745.2-202ENST00000411880 369 ntBASIC4.38□□□□□ -1.71
CLIP4Q8N3C7 BX510359.3-201ENST00000422168 306 ntBASIC4.38□□□□□ -1.71
CLIP4Q8N3C7 AL096799.1-201ENST00000425900 381 ntTSL 2 BASIC4.38□□□□□ -1.71
CLIP4Q8N3C7 AL593851.1-201ENST00000426171 157 ntBASIC4.38□□□□□ -1.71
CLIP4Q8N3C7 TAF1A-AS1-202ENST00000427540 750 ntTSL 2 BASIC4.38□□□□□ -1.71
CLIP4Q8N3C7 RBMY2QP-201ENST00000429799 1147 ntBASIC4.38□□□□□ -1.71
CLIP4Q8N3C7 RPS27P18-201ENST00000431701 247 ntBASIC4.38□□□□□ -1.71
CLIP4Q8N3C7 HMGB1P45-201ENST00000435986 653 ntBASIC4.38□□□□□ -1.71
CLIP4Q8N3C7 PRPF38AP2-201ENST00000438179 851 ntBASIC4.38□□□□□ -1.71
CLIP4Q8N3C7 AL360091.3-201ENST00000442146 387 ntTSL 5 BASIC4.38□□□□□ -1.71
CLIP4Q8N3C7 AL139121.1-201ENST00000445647 244 ntTSL 2 BASIC4.38□□□□□ -1.71
CLIP4Q8N3C7 AL929288.2-201ENST00000446368 407 ntBASIC4.38□□□□□ -1.71
CLIP4Q8N3C7 SLC25A18P1-201ENST00000449385 454 ntBASIC4.38□□□□□ -1.71
CLIP4Q8N3C7 AL031668.1-201ENST00000451556 603 ntTSL 3 BASIC4.38□□□□□ -1.71
CLIP4Q8N3C7 AL157400.4-201ENST00000455699 667 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
CLIP4Q8N3C7 AC011979.1-201ENST00000472300 483 ntBASIC4.38□□□□□ -1.71
CLIP4Q8N3C7 RN7SL629P-201ENST00000489622 285 ntBASIC4.38□□□□□ -1.71
CLIP4Q8N3C7 ALDH7A1P3-201ENST00000492517 345 ntBASIC4.38□□□□□ -1.71
CLIP4Q8N3C7 MND1-203ENST00000504860 638 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
CLIP4Q8N3C7 AC108156.1-201ENST00000507849 481 ntTSL 3 BASIC4.38□□□□□ -1.71
CLIP4Q8N3C7 AC011411.1-201ENST00000509592 876 ntBASIC4.38□□□□□ -1.71
CLIP4Q8N3C7 AC107463.1-203ENST00000509713 284 ntTSL 5 BASIC4.38□□□□□ -1.71
CLIP4Q8N3C7 XKRY-201ENST00000510392 1100 ntBASIC4.38□□□□□ -1.71
CLIP4Q8N3C7 BTF3P13-201ENST00000513224 490 ntBASIC4.38□□□□□ -1.71
CLIP4Q8N3C7 AC026904.2-201ENST00000521359 537 ntTSL 3 BASIC4.38□□□□□ -1.71
CLIP4Q8N3C7 AC091163.1-201ENST00000524012 605 ntTSL 4 BASIC4.38□□□□□ -1.71
CLIP4Q8N3C7 AC087783.1-201ENST00000527135 564 ntTSL 4 BASIC4.38□□□□□ -1.71
CLIP4Q8N3C7 AC124293.1-201ENST00000530034 493 ntBASIC4.38□□□□□ -1.71
CLIP4Q8N3C7 AC008033.2-201ENST00000542626 177 ntBASIC4.38□□□□□ -1.71
CLIP4Q8N3C7 AC093012.1-203ENST00000548437 450 ntTSL 2 BASIC4.38□□□□□ -1.71
CLIP4Q8N3C7 AC133555.2-201ENST00000550213 292 ntBASIC4.38□□□□□ -1.71
CLIP4Q8N3C7 AL158801.3-201ENST00000555514 363 ntTSL 3 BASIC4.38□□□□□ -1.71
CLIP4Q8N3C7 AC079075.1-201ENST00000559543 878 ntBASIC4.38□□□□□ -1.71
CLIP4Q8N3C7 AC135628.1-201ENST00000568867 534 ntBASIC4.38□□□□□ -1.71
CLIP4Q8N3C7 AC022069.1-201ENST00000582910 658 ntBASIC4.38□□□□□ -1.71
CLIP4Q8N3C7 NDUFV2-AS1-202ENST00000583081 399 ntTSL 5 BASIC4.38□□□□□ -1.71
CLIP4Q8N3C7 AC008764.2-201ENST00000597226 376 ntTSL 5 BASIC4.38□□□□□ -1.71
CLIP4Q8N3C7 AC124312.4-201ENST00000605533 310 ntBASIC4.38□□□□□ -1.71
CLIP4Q8N3C7 AC090525.3-201ENST00000605601 189 ntBASIC4.38□□□□□ -1.71
CLIP4Q8N3C7 AP000238.1-201ENST00000608759 426 ntBASIC4.38□□□□□ -1.71
CLIP4Q8N3C7 AC099676.1-201ENST00000608886 657 ntBASIC4.38□□□□□ -1.71
CLIP4Q8N3C7 C3orf49-203ENST00000616659 876 ntAPPRIS ALT2 TSL 5 BASIC4.38□□□□□ -1.71
CLIP4Q8N3C7 Metazoa_SRP.179-201ENST00000619020 241 ntBASIC4.38□□□□□ -1.71
CLIP4Q8N3C7 AL596220.1-201ENST00000622121 542 ntTSL 4 BASIC4.38□□□□□ -1.71
CLIP4Q8N3C7 AC091905.4-201ENST00000623432 202 ntBASIC4.38□□□□□ -1.71
CLIP4Q8N3C7 AL358154.1-201ENST00000627075 444 ntTSL 3 BASIC4.38□□□□□ -1.71
CLIP4Q8N3C7 MFSD8-245ENST00000641743 948 ntBASIC4.38□□□□□ -1.71
CLIP4Q8N3C7 ARHGAP28-207ENST00000532996 1859 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
CLIP4Q8N3C7 AC109780.1-201ENST00000451768 1344 ntBASIC4.38□□□□□ -1.71
CLIP4Q8N3C7 DNAJC9-AS1-204ENST00000440197 2865 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
CLIP4Q8N3C7 SLC13A1-201ENST00000194130 3815 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
CLIP4Q8N3C7 LINC00276-202ENST00000418420 3503 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
CLIP4Q8N3C7 PIGN-245ENST00000640252 7924 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
CLIP4Q8N3C7 OR5A1-202ENST00000641045 8612 ntAPPRIS P1 BASIC4.38□□□□□ -1.71
CLIP4Q8N3C7 OTOGL-204ENST00000547103 8032 ntAPPRIS ALT2 TSL 5 BASIC4.38□□□□□ -1.71
CLIP4Q8N3C7 AJ009632.2-204ENST00000635621 1401 ntTSL 5 BASIC4.38□□□□□ -1.71
CLIP4Q8N3C7 RMST-202ENST00000541282 2099 ntTSL 2 BASIC4.37□□□□□ -1.71
CLIP4Q8N3C7 STAP1-201ENST00000265404 1511 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
CLIP4Q8N3C7 KMT2E-216ENST00000622386 1588 ntTSL 5 BASIC4.37□□□□□ -1.71
CLIP4Q8N3C7 SAMMSON-226ENST00000642089 1582 ntBASIC4.37□□□□□ -1.71
CLIP4Q8N3C7 R3HCC1L-201ENST00000298999 3379 ntAPPRIS P1 TSL 5 BASIC4.37□□□□□ -1.71
CLIP4Q8N3C7 IKZF3-202ENST00000346243 1296 ntTSL 5 BASIC4.37□□□□□ -1.71
CLIP4Q8N3C7 TMEM225-201ENST00000375026 1107 ntAPPRIS P2 TSL 1 (best) BASIC4.37□□□□□ -1.71
CLIP4Q8N3C7 OR51A2-201ENST00000380371 942 ntAPPRIS P1 BASIC4.37□□□□□ -1.71
CLIP4Q8N3C7 RNU6-225P-201ENST00000384613 103 ntBASIC4.37□□□□□ -1.71
CLIP4Q8N3C7 RNU1-82P-201ENST00000390851 165 ntBASIC4.37□□□□□ -1.71
CLIP4Q8N3C7 AL590867.1-201ENST00000392385 1212 ntTSL 2 BASIC4.37□□□□□ -1.71
CLIP4Q8N3C7 METTL5-204ENST00000409340 472 ntTSL 5 BASIC4.37□□□□□ -1.71
CLIP4Q8N3C7 RN7SKP213-201ENST00000410746 298 ntBASIC4.37□□□□□ -1.71
CLIP4Q8N3C7 DPPA2P3-201ENST00000411853 655 ntBASIC4.37□□□□□ -1.71
CLIP4Q8N3C7 AC114755.2-201ENST00000413520 361 ntBASIC4.37□□□□□ -1.71
CLIP4Q8N3C7 RPL21P43-201ENST00000425440 472 ntBASIC4.37□□□□□ -1.71
CLIP4Q8N3C7 OR2B7P-201ENST00000429302 934 ntBASIC4.37□□□□□ -1.71
CLIP4Q8N3C7 AL080316.1-201ENST00000432438 499 ntTSL 2 BASIC4.37□□□□□ -1.71
CLIP4Q8N3C7 RPL7P29-201ENST00000437151 728 ntBASIC4.37□□□□□ -1.71
CLIP4Q8N3C7 RPS26P30-201ENST00000443431 335 ntBASIC4.37□□□□□ -1.71
CLIP4Q8N3C7 AL035701.1-201ENST00000444038 462 ntTSL 3 BASIC4.37□□□□□ -1.71
CLIP4Q8N3C7 AC099342.1-201ENST00000446399 1124 ntTSL 3 BASIC4.37□□□□□ -1.71
CLIP4Q8N3C7 MTCO2P7-201ENST00000446518 666 ntBASIC4.37□□□□□ -1.71
CLIP4Q8N3C7 RPL31P44-201ENST00000447680 377 ntBASIC4.37□□□□□ -1.71
CLIP4Q8N3C7 Z99127.1-201ENST00000452442 670 ntTSL 5 BASIC4.37□□□□□ -1.71
CLIP4Q8N3C7 AC073387.1-201ENST00000453261 709 ntBASIC4.37□□□□□ -1.71
CLIP4Q8N3C7 MRPL42P4-201ENST00000453267 443 ntBASIC4.37□□□□□ -1.71
CLIP4Q8N3C7 RPL31P3-201ENST00000458430 332 ntBASIC4.37□□□□□ -1.71
CLIP4Q8N3C7 AC026348.1-201ENST00000462549 1053 ntBASIC4.37□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 81.2 ms