Protein–RNA interactions for Protein: Q8IX90

SKA3, Spindle and kinetochore-associated protein 3, humanhuman

Predictions only

Length 412 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SKA3Q8IX90 AC022511.1-201ENST00000544089 476 ntTSL 2 BASIC3.72□□□□□ -1.81
SKA3Q8IX90 AGGF1P8-201ENST00000562979 1000 ntBASIC3.72□□□□□ -1.81
SKA3Q8IX90 AC013565.1-201ENST00000565938 597 ntTSL 2 BASIC3.72□□□□□ -1.81
SKA3Q8IX90 AC093227.3-202ENST00000586606 704 ntAPPRIS P5 TSL 3 BASIC3.72□□□□□ -1.81
SKA3Q8IX90 AC079880.2-201ENST00000603790 1213 ntBASIC3.72□□□□□ -1.81
SKA3Q8IX90 AC079610.2-201ENST00000604818 690 ntBASIC3.72□□□□□ -1.81
SKA3Q8IX90 AC011374.2-201ENST00000607135 526 ntBASIC3.72□□□□□ -1.81
SKA3Q8IX90 AL158211.2-201ENST00000607282 395 ntBASIC3.72□□□□□ -1.81
SKA3Q8IX90 AP001033.2-201ENST00000609701 1003 ntBASIC3.72□□□□□ -1.81
SKA3Q8IX90 LINC02335-201ENST00000616578 659 ntTSL 3 BASIC3.72□□□□□ -1.81
SKA3Q8IX90 MALAT1-210ENST00000617489 318 ntTSL 2 BASIC3.72□□□□□ -1.81
SKA3Q8IX90 AC139769.3-201ENST00000618383 175 ntBASIC3.72□□□□□ -1.81
SKA3Q8IX90 LINC00923-207ENST00000619015 505 ntTSL 5 BASIC3.72□□□□□ -1.81
SKA3Q8IX90 AC244517.5-203ENST00000624778 517 ntTSL 2 BASIC3.72□□□□□ -1.81
SKA3Q8IX90 RNF111-206ENST00000559209 5278 ntTSL 1 (best) BASIC3.72□□□□□ -1.81
SKA3Q8IX90 PHKBP1-201ENST00000450951 1951 ntBASIC3.72□□□□□ -1.81
SKA3Q8IX90 C9orf153-204ENST00000613665 1738 ntAPPRIS P2 TSL 2 BASIC3.72□□□□□ -1.81
SKA3Q8IX90 TAOK3-202ENST00000419821 4301 ntAPPRIS P1 TSL 1 (best) BASIC3.72□□□□□ -1.81
SKA3Q8IX90 HSPA8P1-201ENST00000425843 1833 ntBASIC3.72□□□□□ -1.81
SKA3Q8IX90 ECT2-204ENST00000392692 4158 ntTSL 1 (best) BASIC3.72□□□□□ -1.81
SKA3Q8IX90 MYB-213ENST00000525369 2866 ntTSL 1 (best) BASIC3.72□□□□□ -1.81
SKA3Q8IX90 KLRC1-201ENST00000347831 1332 ntAPPRIS ALT2 TSL 1 (best) BASIC3.71□□□□□ -1.81
SKA3Q8IX90 AKAP6-201ENST00000280979 15006 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.81
SKA3Q8IX90 PTGFR-203ENST00000370758 4337 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.82
SKA3Q8IX90 AC126755.2-208ENST00000327792 462 ntBASIC3.71□□□□□ -1.82
SKA3Q8IX90 OR6X1-201ENST00000327930 1058 ntAPPRIS P1 BASIC3.71□□□□□ -1.82
SKA3Q8IX90 AC138969.1-213ENST00000331436 462 ntBASIC3.71□□□□□ -1.82
SKA3Q8IX90 AL158212.2-201ENST00000369391 460 ntTSL 3 BASIC3.71□□□□□ -1.82
SKA3Q8IX90 KRTAP19-8-201ENST00000382822 318 ntAPPRIS P1 BASIC3.71□□□□□ -1.82
SKA3Q8IX90 RNA5SP239-201ENST00000410218 129 ntBASIC3.71□□□□□ -1.82
SKA3Q8IX90 AC016397.1-201ENST00000412463 242 ntBASIC3.71□□□□□ -1.82
SKA3Q8IX90 RPL23AP26-201ENST00000412728 464 ntBASIC3.71□□□□□ -1.82
SKA3Q8IX90 AL133419.1-201ENST00000423153 640 ntTSL 3 BASIC3.71□□□□□ -1.82
SKA3Q8IX90 PNRC2P1-201ENST00000423940 420 ntBASIC3.71□□□□□ -1.82
SKA3Q8IX90 AF228730.2-201ENST00000438784 848 ntBASIC3.71□□□□□ -1.82
SKA3Q8IX90 LINC00280-201ENST00000439525 448 ntTSL 2 BASIC3.71□□□□□ -1.82
SKA3Q8IX90 BMS1P22-202ENST00000440946 1160 ntTSL 1 (best) BASIC3.71□□□□□ -1.82
SKA3Q8IX90 RPS27P5-201ENST00000444247 244 ntBASIC3.71□□□□□ -1.82
SKA3Q8IX90 AL121760.1-201ENST00000447206 346 ntTSL 2 BASIC3.71□□□□□ -1.82
SKA3Q8IX90 AL358075.1-201ENST00000450004 649 ntTSL 3 BASIC3.71□□□□□ -1.82
SKA3Q8IX90 AC009220.1-201ENST00000451614 275 ntBASIC3.71□□□□□ -1.82
SKA3Q8IX90 AC009963.2-201ENST00000453431 138 ntBASIC3.71□□□□□ -1.82
SKA3Q8IX90 RPS29P19-201ENST00000479709 171 ntBASIC3.71□□□□□ -1.82
SKA3Q8IX90 AC104687.1-201ENST00000485829 412 ntBASIC3.71□□□□□ -1.82
SKA3Q8IX90 DWORF-201ENST00000489090 873 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.82
SKA3Q8IX90 AC091167.1-201ENST00000492017 396 ntBASIC3.71□□□□□ -1.82
SKA3Q8IX90 AC091826.2-201ENST00000504034 412 ntTSL 3 BASIC3.71□□□□□ -1.82
SKA3Q8IX90 AC113404.3-201ENST00000506621 555 ntTSL 5 BASIC3.71□□□□□ -1.82
SKA3Q8IX90 AC006063.1-201ENST00000512511 560 ntTSL 4 BASIC3.71□□□□□ -1.82
SKA3Q8IX90 SNORA26.10-201ENST00000516427 141 ntBASIC3.71□□□□□ -1.82
SKA3Q8IX90 AC025524.2-211ENST00000519990 1173 ntTSL 1 (best) BASIC3.71□□□□□ -1.82
SKA3Q8IX90 AL356215.1-201ENST00000528366 1102 ntTSL 2 BASIC3.71□□□□□ -1.82
SKA3Q8IX90 SPTY2D1-AS1-203ENST00000542172 331 ntAPPRIS ALT2 TSL 1 (best) BASIC3.71□□□□□ -1.82
SKA3Q8IX90 AL355922.1-201ENST00000555624 337 ntTSL 3 BASIC3.71□□□□□ -1.82
SKA3Q8IX90 C15orf41-203ENST00000562489 715 ntTSL 2 BASIC3.71□□□□□ -1.82
SKA3Q8IX90 NUFIP2-202ENST00000579665 559 ntTSL 1 (best) BASIC3.71□□□□□ -1.82
SKA3Q8IX90 MIR3138-201ENST00000585238 82 ntBASIC3.71□□□□□ -1.82
SKA3Q8IX90 MIR7515HG-239ENST00000591053 1113 ntTSL 5 BASIC3.71□□□□□ -1.82
SKA3Q8IX90 AL157392.3-211ENST00000599378 509 ntTSL 4 BASIC3.71□□□□□ -1.82
SKA3Q8IX90 AC018618.2-201ENST00000604770 446 ntBASIC3.71□□□□□ -1.82
SKA3Q8IX90 AC005972.3-201ENST00000606304 481 ntBASIC3.71□□□□□ -1.82
SKA3Q8IX90 AL445423.1-201ENST00000609941 536 ntBASIC3.71□□□□□ -1.82
SKA3Q8IX90 FAM27D1-201ENST00000612308 341 ntBASIC3.71□□□□□ -1.82
SKA3Q8IX90 PRKCQ-AS1-213ENST00000613985 883 ntTSL 5 BASIC3.71□□□□□ -1.82
SKA3Q8IX90 MIR7973-1-201ENST00000614683 76 ntBASIC3.71□□□□□ -1.82
SKA3Q8IX90 THRA1/BTR-204ENST00000621191 513 ntTSL 5 BASIC3.71□□□□□ -1.82
SKA3Q8IX90 AC097460.3-201ENST00000623099 442 ntBASIC3.71□□□□□ -1.82
SKA3Q8IX90 AL589740.1-204ENST00000634677 630 ntTSL 4 BASIC3.71□□□□□ -1.82
SKA3Q8IX90 AC096656.1-201ENST00000623826 1364 ntBASIC3.71□□□□□ -1.82
SKA3Q8IX90 MTX3-203ENST00000512560 4799 ntTSL 2 BASIC3.71□□□□□ -1.82
SKA3Q8IX90 MGAT4A-203ENST00000409391 2018 ntAPPRIS P1 TSL 5 BASIC3.71□□□□□ -1.82
SKA3Q8IX90 AL589745.1-201ENST00000421190 3336 ntTSL 5 BASIC3.71□□□□□ -1.82
SKA3Q8IX90 DLG1-217ENST00000452595 3053 ntTSL 2 BASIC3.71□□□□□ -1.82
SKA3Q8IX90 ZNF43-207ENST00000595461 3399 ntAPPRIS ALT2 TSL 1 (best) BASIC3.71□□□□□ -1.82
SKA3Q8IX90 PREPL-207ENST00000409957 4703 ntTSL 5 BASIC3.7□□□□□ -1.82
SKA3Q8IX90 MTND5P11-201ENST00000511037 1812 ntBASIC3.7□□□□□ -1.82
SKA3Q8IX90 AC009229.4-201ENST00000623854 1947 ntBASIC3.7□□□□□ -1.82
SKA3Q8IX90 LINC01902-202ENST00000636983 4607 ntTSL 5 BASIC3.7□□□□□ -1.82
SKA3Q8IX90 AC009951.1-201ENST00000623674 2614 ntBASIC3.7□□□□□ -1.82
SKA3Q8IX90 FAM3C2-201ENST00000312214 681 ntBASIC3.7□□□□□ -1.82
SKA3Q8IX90 WFDC9-201ENST00000326000 659 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
SKA3Q8IX90 C1orf194-203ENST00000369948 663 ntAPPRIS P1 TSL 2 BASIC3.7□□□□□ -1.82
SKA3Q8IX90 RNU6-1005P-201ENST00000384519 107 ntBASIC3.7□□□□□ -1.82
SKA3Q8IX90 SNORA40.4-201ENST00000390971 128 ntBASIC3.7□□□□□ -1.82
SKA3Q8IX90 ATP5F1P6-201ENST00000402768 767 ntBASIC3.7□□□□□ -1.82
SKA3Q8IX90 CHIAP3-201ENST00000423668 1133 ntBASIC3.7□□□□□ -1.82
SKA3Q8IX90 VN1R42P-201ENST00000424651 344 ntBASIC3.7□□□□□ -1.82
SKA3Q8IX90 FTH1P6-201ENST00000430768 320 ntBASIC3.7□□□□□ -1.82
SKA3Q8IX90 AL512661.1-201ENST00000434586 1253 ntBASIC3.7□□□□□ -1.82
SKA3Q8IX90 KRR1-202ENST00000438169 975 ntTSL 1 (best) BASIC3.7□□□□□ -1.82
SKA3Q8IX90 KRTAP21-3-201ENST00000444335 253 ntAPPRIS P1 BASIC3.7□□□□□ -1.82
SKA3Q8IX90 H2AFZP6-201ENST00000444403 394 ntBASIC3.7□□□□□ -1.82
SKA3Q8IX90 AC112715.1-201ENST00000445534 350 ntTSL 3 BASIC3.7□□□□□ -1.82
SKA3Q8IX90 AC079910.1-201ENST00000477099 749 ntTSL 3 BASIC3.7□□□□□ -1.82
SKA3Q8IX90 AC069439.2-201ENST00000496403 789 ntTSL 2 BASIC3.7□□□□□ -1.82
SKA3Q8IX90 NUDT6-203ENST00000502270 678 ntTSL 5 BASIC3.7□□□□□ -1.82
SKA3Q8IX90 BNIP3P41-201ENST00000503774 571 ntBASIC3.7□□□□□ -1.82
SKA3Q8IX90 LINC01612-201ENST00000504509 469 ntTSL 3 BASIC3.7□□□□□ -1.82
SKA3Q8IX90 AC096576.3-201ENST00000505528 721 ntTSL 5 BASIC3.7□□□□□ -1.82
SKA3Q8IX90 MRPL36-203ENST00000505818 595 ntAPPRIS P1 TSL 3 BASIC3.7□□□□□ -1.82
Retrieved 100 of 98,524 protein–RNA pairs in 79.8 ms