Protein–RNA interactions for Protein: Q71U36

TUBA1A, Tubulin alpha-1A chain, humanhuman

Predictions only

Length 451 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TUBA1AQ71U36 RN7SL329P-201ENST00000467740 299 ntBASIC4.38□□□□□ -1.71
TUBA1AQ71U36 APOA2-207ENST00000470459 416 ntTSL 5 BASIC4.38□□□□□ -1.71
TUBA1AQ71U36 RN7SL319P-201ENST00000480656 221 ntBASIC4.38□□□□□ -1.71
TUBA1AQ71U36 AC012158.1-204ENST00000483430 465 ntBASIC4.38□□□□□ -1.71
TUBA1AQ71U36 LRRC70-203ENST00000491184 703 ntTSL 3 BASIC4.38□□□□□ -1.71
TUBA1AQ71U36 GYPB-202ENST00000502664 521 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
TUBA1AQ71U36 AC119150.1-201ENST00000507143 563 ntTSL 2 BASIC4.38□□□□□ -1.71
TUBA1AQ71U36 AC119751.1-201ENST00000513357 765 ntBASIC4.38□□□□□ -1.71
TUBA1AQ71U36 AC118465.1-201ENST00000513820 1271 ntBASIC4.38□□□□□ -1.71
TUBA1AQ71U36 COMMD10-206ENST00000515539 869 ntTSL 3 BASIC4.38□□□□□ -1.71
TUBA1AQ71U36 Y_RNA.688-201ENST00000516565 95 ntBASIC4.38□□□□□ -1.71
TUBA1AQ71U36 AC069113.2-201ENST00000517735 359 ntTSL 3 BASIC4.38□□□□□ -1.71
TUBA1AQ71U36 AP001267.3-202ENST00000525992 448 ntTSL 3 BASIC4.38□□□□□ -1.71
TUBA1AQ71U36 AC023050.2-201ENST00000544968 387 ntBASIC4.38□□□□□ -1.71
TUBA1AQ71U36 AC034102.2-201ENST00000548861 489 ntAPPRIS P1 TSL 5 BASIC4.38□□□□□ -1.71
TUBA1AQ71U36 AC133065.1-201ENST00000572017 575 ntTSL 3 BASIC4.38□□□□□ -1.71
TUBA1AQ71U36 AL109935.2-201ENST00000587737 395 ntTSL 5 BASIC4.38□□□□□ -1.71
TUBA1AQ71U36 L34079.2-201ENST00000597119 561 ntTSL 3 BASIC4.38□□□□□ -1.71
TUBA1AQ71U36 AC018695.3-201ENST00000602617 408 ntTSL 2 BASIC4.38□□□□□ -1.71
TUBA1AQ71U36 AL136964.1-201ENST00000622038 2990 ntBASIC4.38□□□□□ -1.71
TUBA1AQ71U36 AC015804.1-201ENST00000622935 435 ntBASIC4.38□□□□□ -1.71
TUBA1AQ71U36 AC024023.1-201ENST00000624530 922 ntBASIC4.38□□□□□ -1.71
TUBA1AQ71U36 AL353662.3-201ENST00000625131 237 ntBASIC4.38□□□□□ -1.71
TUBA1AQ71U36 AC087632.1-216ENST00000625619 487 ntAPPRIS P1 TSL 3 BASIC4.38□□□□□ -1.71
TUBA1AQ71U36 AL121594.5-201ENST00000631724 573 ntBASIC4.38□□□□□ -1.71
TUBA1AQ71U36 AL355306.2-208ENST00000634868 1251 ntTSL 5 BASIC4.38□□□□□ -1.71
TUBA1AQ71U36 R3HCC1L-205ENST00000612478 3337 ntTSL 5 BASIC4.38□□□□□ -1.71
TUBA1AQ71U36 CNOT2-231ENST00000551483 4753 ntTSL 2 BASIC4.38□□□□□ -1.71
TUBA1AQ71U36 AC027290.2-201ENST00000623210 18662 ntBASIC4.38□□□□□ -1.71
TUBA1AQ71U36 WDR72-204ENST00000559418 3602 ntTSL 5 BASIC4.38□□□□□ -1.71
TUBA1AQ71U36 MGAT4A-204ENST00000414521 3709 ntTSL 2 BASIC4.38□□□□□ -1.71
TUBA1AQ71U36 PRKAA2-202ENST00000610361 9280 ntAPPRIS ALT1 TSL 5 BASIC4.38□□□□□ -1.71
TUBA1AQ71U36 AL365214.2-201ENST00000433684 1365 ntTSL 2 BASIC4.38□□□□□ -1.71
TUBA1AQ71U36 MTRR-202ENST00000440940 3215 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
TUBA1AQ71U36 AC106871.1-201ENST00000568324 3102 ntBASIC4.37□□□□□ -1.71
TUBA1AQ71U36 AK9-202ENST00000355283 2499 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
TUBA1AQ71U36 ZFYVE16-201ENST00000338008 6773 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
TUBA1AQ71U36 TMEM68-202ENST00000434581 2549 ntAPPRIS P1 TSL 5 BASIC4.37□□□□□ -1.71
TUBA1AQ71U36 FAM111A-201ENST00000361723 3592 ntAPPRIS P1 TSL 2 BASIC4.37□□□□□ -1.71
TUBA1AQ71U36 ARAP2-210ENST00000618163 2592 ntTSL 5 BASIC4.37□□□□□ -1.71
TUBA1AQ71U36 OR52E4-202ENST00000641726 2947 ntAPPRIS P1 BASIC4.37□□□□□ -1.71
TUBA1AQ71U36 DGKI-204ENST00000453654 12928 ntAPPRIS ALT2 TSL 1 (best) BASIC4.37□□□□□ -1.71
TUBA1AQ71U36 COA1-201ENST00000223336 927 ntAPPRIS P3 TSL 2 BASIC4.37□□□□□ -1.71
TUBA1AQ71U36 HOMER1-201ENST00000282260 774 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
TUBA1AQ71U36 DEFB112-201ENST00000322246 342 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
TUBA1AQ71U36 OR5H2-201ENST00000355273 945 ntBASIC4.37□□□□□ -1.71
TUBA1AQ71U36 OR5H2-202ENST00000356526 930 ntAPPRIS P1 BASIC4.37□□□□□ -1.71
TUBA1AQ71U36 RN7SKP95-201ENST00000362860 303 ntBASIC4.37□□□□□ -1.71
TUBA1AQ71U36 Y_RNA.169-201ENST00000363745 96 ntBASIC4.37□□□□□ -1.71
TUBA1AQ71U36 RNU6-353P-201ENST00000364266 108 ntBASIC4.37□□□□□ -1.71
TUBA1AQ71U36 RNU4-7P-201ENST00000364758 141 ntBASIC4.37□□□□□ -1.71
TUBA1AQ71U36 C1orf105-201ENST00000367725 888 ntTSL 2 BASIC4.37□□□□□ -1.71
TUBA1AQ71U36 RGS10-201ENST00000369101 738 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
TUBA1AQ71U36 RPL23AP59-201ENST00000399415 461 ntBASIC4.37□□□□□ -1.71
TUBA1AQ71U36 TAF13P2-201ENST00000416876 286 ntBASIC4.37□□□□□ -1.71
TUBA1AQ71U36 AC009518.2-201ENST00000418056 731 ntBASIC4.37□□□□□ -1.71
TUBA1AQ71U36 OR2AM1P-201ENST00000422137 422 ntBASIC4.37□□□□□ -1.71
TUBA1AQ71U36 IGKV1OR9-1-201ENST00000424370 284 ntBASIC4.37□□□□□ -1.71
TUBA1AQ71U36 AL138785.1-201ENST00000425821 331 ntBASIC4.37□□□□□ -1.71
TUBA1AQ71U36 AC092164.1-202ENST00000428036 486 ntTSL 3 BASIC4.37□□□□□ -1.71
TUBA1AQ71U36 AL358972.1-201ENST00000434356 466 ntTSL 2 BASIC4.37□□□□□ -1.71
TUBA1AQ71U36 GACAT1-202ENST00000441383 540 ntTSL 4 BASIC4.37□□□□□ -1.71
TUBA1AQ71U36 AC064871.1-201ENST00000444562 427 ntTSL 3 BASIC4.37□□□□□ -1.71
TUBA1AQ71U36 MTCYBP42-201ENST00000444653 1130 ntBASIC4.37□□□□□ -1.71
TUBA1AQ71U36 AL031668.1-201ENST00000451556 603 ntTSL 3 BASIC4.37□□□□□ -1.71
TUBA1AQ71U36 AC010890.1-201ENST00000454699 469 ntTSL 4 BASIC4.37□□□□□ -1.71
TUBA1AQ71U36 AL133477.1-201ENST00000457472 514 ntBASIC4.37□□□□□ -1.71
TUBA1AQ71U36 RN7SL97P-201ENST00000486780 299 ntBASIC4.37□□□□□ -1.71
TUBA1AQ71U36 MRPS33P2-201ENST00000507850 322 ntBASIC4.37□□□□□ -1.71
TUBA1AQ71U36 HOMER1-204ENST00000508576 815 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
TUBA1AQ71U36 AC010486.3-201ENST00000511602 785 ntBASIC4.37□□□□□ -1.71
TUBA1AQ71U36 SNORD116-26-201ENST00000516006 96 ntBASIC4.37□□□□□ -1.71
TUBA1AQ71U36 AC027419.2-201ENST00000518439 497 ntTSL 3 BASIC4.37□□□□□ -1.71
TUBA1AQ71U36 RGS5-219ENST00000528019 512 ntTSL 4 BASIC4.37□□□□□ -1.71
TUBA1AQ71U36 AP003557.1-202ENST00000528978 562 ntTSL 4 BASIC4.37□□□□□ -1.71
TUBA1AQ71U36 DEFB130C-202ENST00000530001 230 ntBASIC4.37□□□□□ -1.71
TUBA1AQ71U36 AC107882.1-201ENST00000530837 477 ntTSL 3 BASIC4.37□□□□□ -1.71
TUBA1AQ71U36 AC138360.1-201ENST00000552332 386 ntTSL 3 BASIC4.37□□□□□ -1.71
TUBA1AQ71U36 AL133372.3-201ENST00000553082 821 ntTSL 3 BASIC4.37□□□□□ -1.71
TUBA1AQ71U36 AL359232.1-201ENST00000556361 442 ntTSL 3 BASIC4.37□□□□□ -1.71
TUBA1AQ71U36 AC012379.1-201ENST00000558304 406 ntTSL 3 BASIC4.37□□□□□ -1.71
TUBA1AQ71U36 AC022929.1-201ENST00000560675 823 ntTSL 3 BASIC4.37□□□□□ -1.71
TUBA1AQ71U36 AGGF1P6-201ENST00000569213 976 ntBASIC4.37□□□□□ -1.71
TUBA1AQ71U36 AP005230.1-201ENST00000585072 675 ntTSL 5 BASIC4.37□□□□□ -1.71
TUBA1AQ71U36 DYNAP-202ENST00000585973 1102 ntAPPRIS ALT2 TSL 3 BASIC4.37□□□□□ -1.71
TUBA1AQ71U36 CT45A3-201ENST00000597510 1076 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
TUBA1AQ71U36 AL020997.3-201ENST00000602843 359 ntBASIC4.37□□□□□ -1.71
TUBA1AQ71U36 AL049844.2-201ENST00000604280 628 ntBASIC4.37□□□□□ -1.71
TUBA1AQ71U36 AL022161.1-201ENST00000604390 213 ntBASIC4.37□□□□□ -1.71
TUBA1AQ71U36 CT45A2-201ENST00000605791 1076 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
TUBA1AQ71U36 AC024257.5-201ENST00000612739 531 ntBASIC4.37□□□□□ -1.71
TUBA1AQ71U36 AC012414.7-202ENST00000622705 1090 ntBASIC4.37□□□□□ -1.71
TUBA1AQ71U36 AC091905.4-201ENST00000623432 202 ntBASIC4.37□□□□□ -1.71
TUBA1AQ71U36 OR56A3-205ENST00000641905 4595 ntAPPRIS P1 BASIC4.37□□□□□ -1.71
TUBA1AQ71U36 ERGIC2-201ENST00000360150 5014 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
TUBA1AQ71U36 IPO11-203ENST00000409534 1725 ntTSL 2 BASIC4.37□□□□□ -1.71
TUBA1AQ71U36 DICER1-212ENST00000541352 5621 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
TUBA1AQ71U36 AC111188.2-201ENST00000529697 1387 ntBASIC4.37□□□□□ -1.71
TUBA1AQ71U36 ASAH2-201ENST00000329428 2184 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
TUBA1AQ71U36 SLC38A9-223ENST00000515629 2673 ntTSL 2 BASIC4.37□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 105.5 ms