Protein–RNA interactions for Protein: Q6PCD5

RFWD3, E3 ubiquitin-protein ligase RFWD3, humanhuman

Predictions only

Length 774 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFWD3Q6PCD5 ERCC6-202ENST00000374127 1782 ntBASIC4.22□□□□□ -1.73
RFWD3Q6PCD5 SCN3A-209ENST00000639244 8854 ntTSL 5 BASIC4.22□□□□□ -1.73
RFWD3Q6PCD5 DMD-207ENST00000378677 13932 ntAPPRIS ALT2 TSL 5 BASIC4.22□□□□□ -1.73
RFWD3Q6PCD5 AC110597.3-202ENST00000583493 3289 ntTSL 5 BASIC4.22□□□□□ -1.73
RFWD3Q6PCD5 IL20-201ENST00000367096 925 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
RFWD3Q6PCD5 AL034376.1-201ENST00000380106 484 ntTSL 2 BASIC4.22□□□□□ -1.73
RFWD3Q6PCD5 RPL23AP48-201ENST00000406913 488 ntBASIC4.22□□□□□ -1.73
RFWD3Q6PCD5 AL353692.2-201ENST00000407054 335 ntBASIC4.22□□□□□ -1.73
RFWD3Q6PCD5 RPL26P37-201ENST00000411983 438 ntBASIC4.22□□□□□ -1.73
RFWD3Q6PCD5 LINC00161-201ENST00000412526 870 ntTSL 2 BASIC4.22□□□□□ -1.73
RFWD3Q6PCD5 AL031674.1-202ENST00000413070 465 ntTSL 3 BASIC4.22□□□□□ -1.73
RFWD3Q6PCD5 CR769775.2-201ENST00000417850 891 ntTSL 3 BASIC4.22□□□□□ -1.73
RFWD3Q6PCD5 AC115285.1-201ENST00000424879 736 ntBASIC4.22□□□□□ -1.73
RFWD3Q6PCD5 OR5BE1P-201ENST00000425977 939 ntBASIC4.22□□□□□ -1.73
RFWD3Q6PCD5 RWDD4P2-201ENST00000426392 563 ntBASIC4.22□□□□□ -1.73
RFWD3Q6PCD5 AC023590.1-205ENST00000430457 676 ntTSL 3 BASIC4.22□□□□□ -1.73
RFWD3Q6PCD5 AL358472.1-201ENST00000431295 329 ntBASIC4.22□□□□□ -1.73
RFWD3Q6PCD5 LPP-AS1-201ENST00000434996 494 ntTSL 3 BASIC4.22□□□□□ -1.73
RFWD3Q6PCD5 AC010975.1-201ENST00000443301 669 ntTSL 3 BASIC4.22□□□□□ -1.73
RFWD3Q6PCD5 AL353898.1-201ENST00000444055 238 ntBASIC4.22□□□□□ -1.73
RFWD3Q6PCD5 ZNF736P6Y-201ENST00000447526 1213 ntBASIC4.22□□□□□ -1.73
RFWD3Q6PCD5 RPL5P13-201ENST00000462840 709 ntBASIC4.22□□□□□ -1.73
RFWD3Q6PCD5 AC108729.2-201ENST00000476543 840 ntBASIC4.22□□□□□ -1.73
RFWD3Q6PCD5 CD200R1-205ENST00000490004 778 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
RFWD3Q6PCD5 AC010468.3-201ENST00000508225 458 ntBASIC4.22□□□□□ -1.73
RFWD3Q6PCD5 IGLVIV-66-1-201ENST00000521832 460 ntBASIC4.22□□□□□ -1.73
RFWD3Q6PCD5 AC099520.1-205ENST00000524083 316 ntTSL 3 BASIC4.22□□□□□ -1.73
RFWD3Q6PCD5 MFAP5-205ENST00000535336 566 ntTSL 4 BASIC4.22□□□□□ -1.73
RFWD3Q6PCD5 AC140847.1-201ENST00000538025 534 ntTSL 4 BASIC4.22□□□□□ -1.73
RFWD3Q6PCD5 LINC01630-204ENST00000582689 539 ntTSL 4 BASIC4.22□□□□□ -1.73
RFWD3Q6PCD5 MIR5684-201ENST00000585074 65 ntBASIC4.22□□□□□ -1.73
RFWD3Q6PCD5 APOC2-203ENST00000590360 744 ntAPPRIS P1 TSL 3 BASIC4.22□□□□□ -1.73
RFWD3Q6PCD5 AC020914.4-201ENST00000597690 277 ntBASIC4.22□□□□□ -1.73
RFWD3Q6PCD5 AL020997.2-201ENST00000602607 184 ntBASIC4.22□□□□□ -1.73
RFWD3Q6PCD5 AL645927.2-201ENST00000618350 349 ntBASIC4.22□□□□□ -1.73
RFWD3Q6PCD5 AL445493.3-201ENST00000619568 477 ntBASIC4.22□□□□□ -1.73
RFWD3Q6PCD5 AC006249.1-201ENST00000621223 471 ntBASIC4.22□□□□□ -1.73
RFWD3Q6PCD5 RPL23AP61-201ENST00000623642 466 ntBASIC4.22□□□□□ -1.73
RFWD3Q6PCD5 AL138960.2-201ENST00000625145 535 ntBASIC4.22□□□□□ -1.73
RFWD3Q6PCD5 ATL2-217ENST00000629272 1242 ntTSL 5 BASIC4.22□□□□□ -1.73
RFWD3Q6PCD5 OR5BE1P-202ENST00000641168 1176 ntBASIC4.22□□□□□ -1.73
RFWD3Q6PCD5 FGD4-211ENST00000531134 2924 ntTSL 2 BASIC4.22□□□□□ -1.73
RFWD3Q6PCD5 DNAH12-202ENST00000351747 9542 ntTSL 5 BASIC4.22□□□□□ -1.73
RFWD3Q6PCD5 GPR171-201ENST00000309180 1786 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
RFWD3Q6PCD5 LINC00971-202ENST00000484892 7308 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
RFWD3Q6PCD5 PHKBP1-201ENST00000450951 1951 ntBASIC4.22□□□□□ -1.73
RFWD3Q6PCD5 STXBP4-204ENST00000434978 2807 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
RFWD3Q6PCD5 SPATA2P1-201ENST00000431223 2055 ntBASIC4.22□□□□□ -1.73
RFWD3Q6PCD5 RPS4Y1-201ENST00000250784 1305 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.73
RFWD3Q6PCD5 CD86-203ENST00000393627 1405 ntAPPRIS ALT2 TSL 1 (best) BASIC4.21□□□□□ -1.73
RFWD3Q6PCD5 FILIP1L-209ENST00000487087 2321 ntTSL 5 BASIC4.21□□□□□ -1.74
RFWD3Q6PCD5 FAM91A3P-201ENST00000456826 2544 ntBASIC4.21□□□□□ -1.74
RFWD3Q6PCD5 FAM169A-201ENST00000389156 5990 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.74
RFWD3Q6PCD5 NME5-201ENST00000265191 1198 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.74
RFWD3Q6PCD5 SNORD35B-201ENST00000363660 87 ntBASIC4.21□□□□□ -1.74
RFWD3Q6PCD5 RNU4-7P-201ENST00000364758 141 ntBASIC4.21□□□□□ -1.74
RFWD3Q6PCD5 MFAP5-202ENST00000396549 1195 ntTSL 2 BASIC4.21□□□□□ -1.74
RFWD3Q6PCD5 PPIAP31-201ENST00000405422 495 ntBASIC4.21□□□□□ -1.74
RFWD3Q6PCD5 AP000357.1-201ENST00000409926 1165 ntBASIC4.21□□□□□ -1.74
RFWD3Q6PCD5 AL354766.2-201ENST00000414085 423 ntTSL 2 BASIC4.21□□□□□ -1.74
RFWD3Q6PCD5 MORF4L1P7-201ENST00000426038 703 ntBASIC4.21□□□□□ -1.74
RFWD3Q6PCD5 TBCAP1-201ENST00000436520 327 ntBASIC4.21□□□□□ -1.74
RFWD3Q6PCD5 LINC01423-202ENST00000436845 423 ntTSL 2 BASIC4.21□□□□□ -1.74
RFWD3Q6PCD5 NUDT7-202ENST00000437314 930 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
RFWD3Q6PCD5 LINC01378-202ENST00000437514 783 ntTSL 3 BASIC4.21□□□□□ -1.74
RFWD3Q6PCD5 AL357052.1-201ENST00000443504 381 ntTSL 3 BASIC4.21□□□□□ -1.74
RFWD3Q6PCD5 RPL21P89-201ENST00000444021 467 ntBASIC4.21□□□□□ -1.74
RFWD3Q6PCD5 MTND2P6-201ENST00000455337 1030 ntBASIC4.21□□□□□ -1.74
RFWD3Q6PCD5 HNRNPDLP3-201ENST00000456745 380 ntBASIC4.21□□□□□ -1.74
RFWD3Q6PCD5 RPL7P1-201ENST00000468161 747 ntBASIC4.21□□□□□ -1.74
RFWD3Q6PCD5 RPL7P9-201ENST00000468715 747 ntBASIC4.21□□□□□ -1.74
RFWD3Q6PCD5 AC006517.1-201ENST00000480485 328 ntBASIC4.21□□□□□ -1.74
RFWD3Q6PCD5 RPL23AP73-201ENST00000492507 471 ntBASIC4.21□□□□□ -1.74
RFWD3Q6PCD5 SUMO1P1-201ENST00000497904 306 ntBASIC4.21□□□□□ -1.74
RFWD3Q6PCD5 LINC01612-201ENST00000504509 469 ntTSL 3 BASIC4.21□□□□□ -1.74
RFWD3Q6PCD5 AC027419.2-201ENST00000518439 497 ntTSL 3 BASIC4.21□□□□□ -1.74
RFWD3Q6PCD5 AC073862.1-201ENST00000537998 409 ntTSL 3 BASIC4.21□□□□□ -1.74
RFWD3Q6PCD5 AC087888.1-201ENST00000550884 1254 ntBASIC4.21□□□□□ -1.74
RFWD3Q6PCD5 LINC02386-202ENST00000551287 564 ntTSL 4 BASIC4.21□□□□□ -1.74
RFWD3Q6PCD5 AL161804.1-201ENST00000555600 708 ntTSL 3 BASIC4.21□□□□□ -1.74
RFWD3Q6PCD5 LINC01584-202ENST00000563990 852 ntTSL 3 BASIC4.21□□□□□ -1.74
RFWD3Q6PCD5 AC068020.1-201ENST00000594215 661 ntBASIC4.21□□□□□ -1.74
RFWD3Q6PCD5 AC114878.2-201ENST00000604863 1251 ntBASIC4.21□□□□□ -1.74
RFWD3Q6PCD5 AL451044.1-201ENST00000604867 238 ntBASIC4.21□□□□□ -1.74
RFWD3Q6PCD5 MIR6875-201ENST00000617506 72 ntBASIC4.21□□□□□ -1.74
RFWD3Q6PCD5 AC083899.2-201ENST00000423285 1376 ntBASIC4.21□□□□□ -1.74
RFWD3Q6PCD5 LINC00158-201ENST00000332587 1476 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
RFWD3Q6PCD5 STEAP2-205ENST00000394629 2261 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
RFWD3Q6PCD5 DST-201ENST00000244364 16742 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
RFWD3Q6PCD5 ZNF638-203ENST00000409544 6821 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.74
RFWD3Q6PCD5 UBE4A-201ENST00000252108 6103 ntAPPRIS ALT1 TSL 1 (best) BASIC4.21□□□□□ -1.74
RFWD3Q6PCD5 PREPL-206ENST00000409936 5212 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.74
RFWD3Q6PCD5 CNGA1-201ENST00000358519 2627 ntAPPRIS P3 TSL 1 (best) BASIC4.21□□□□□ -1.74
RFWD3Q6PCD5 RMDN2-204ENST00000406384 1932 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.74
RFWD3Q6PCD5 OFD1P6Y-201ENST00000432335 1637 ntTSL 2 BASIC4.21□□□□□ -1.74
RFWD3Q6PCD5 TTTY9B-201ENST00000433794 1637 ntTSL 2 BASIC4.21□□□□□ -1.74
RFWD3Q6PCD5 BCLAF1-214ENST00000531224 7263 ntAPPRIS P3 TSL 1 (best) BASIC4.2□□□□□ -1.74
RFWD3Q6PCD5 UBA6-201ENST00000322244 9564 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
RFWD3Q6PCD5 UGT2B7-201ENST00000305231 1887 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
RFWD3Q6PCD5 LINC01505-206ENST00000637046 4266 ntTSL 5 BASIC4.2□□□□□ -1.74
Retrieved 100 of 98,524 protein–RNA pairs in 109.9 ms