Protein–RNA interactions for Protein: Q5THJ4

VPS13D, Vacuolar protein sorting-associated protein 13D, humanhuman

Predictions only

Length 4,388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13DQ5THJ4 ASXL2-203ENST00000435504 12878 ntAPPRIS P5 TSL 5 BASIC2.36□□□□□ -2.03
VPS13DQ5THJ4 ABCG2-204ENST00000515655 4276 ntTSL 1 (best) BASIC2.36□□□□□ -2.03
VPS13DQ5THJ4 HSPA8P19-201ENST00000505359 1517 ntBASIC2.36□□□□□ -2.03
VPS13DQ5THJ4 TMCO5A-203ENST00000558158 2894 ntAPPRIS ALT2 TSL 3 BASIC2.36□□□□□ -2.03
VPS13DQ5THJ4 DOCK7-201ENST00000251157 7084 ntAPPRIS ALT2 TSL 5 BASIC2.36□□□□□ -2.03
VPS13DQ5THJ4 SCN11A-202ENST00000444237 5729 ntAPPRIS ALT2 TSL 5 BASIC2.36□□□□□ -2.03
VPS13DQ5THJ4 POSTN-202ENST00000379743 3196 ntTSL 1 (best) BASIC2.36□□□□□ -2.03
VPS13DQ5THJ4 UNC79-203ENST00000553484 9100 ntTSL 5 BASIC2.36□□□□□ -2.03
VPS13DQ5THJ4 MTUS1-216ENST00000519263 4089 ntTSL 2 BASIC2.36□□□□□ -2.03
VPS13DQ5THJ4 RNA5SP50-201ENST00000363731 107 ntBASIC2.35□□□□□ -2.03
VPS13DQ5THJ4 CYCSP35-201ENST00000451978 304 ntBASIC2.35□□□□□ -2.03
VPS13DQ5THJ4 C1GALT1C1L-201ENST00000475092 1172 ntAPPRIS P1 BASIC2.35□□□□□ -2.03
VPS13DQ5THJ4 AC083923.2-202ENST00000517773 498 ntTSL 3 BASIC2.35□□□□□ -2.03
VPS13DQ5THJ4 MIR3162-201ENST00000581818 82 ntBASIC2.35□□□□□ -2.03
VPS13DQ5THJ4 AL157786.1-204ENST00000594870 506 ntTSL 3 BASIC2.35□□□□□ -2.03
VPS13DQ5THJ4 AL157762.1-201ENST00000619612 415 ntBASIC2.35□□□□□ -2.03
VPS13DQ5THJ4 TLR3-201ENST00000296795 6015 ntAPPRIS P1 TSL 1 (best) BASIC2.35□□□□□ -2.03
VPS13DQ5THJ4 ZNF99-201ENST00000397104 3114 ntAPPRIS P1 TSL 5 BASIC2.35□□□□□ -2.03
VPS13DQ5THJ4 BCLAF1-207ENST00000527759 4373 ntAPPRIS ALT2 TSL 1 (best) BASIC2.35□□□□□ -2.03
VPS13DQ5THJ4 LCOR-204ENST00000371103 10342 ntAPPRIS P3 TSL 1 (best) BASIC2.35□□□□□ -2.03
VPS13DQ5THJ4 RRP15-201ENST00000366932 7771 ntAPPRIS P1 TSL 1 (best) BASIC2.35□□□□□ -2.03
VPS13DQ5THJ4 KIAA1109-201ENST00000264501 15896 ntAPPRIS P1 TSL 5 BASIC2.35□□□□□ -2.03
VPS13DQ5THJ4 TMEM67-202ENST00000409623 3255 ntTSL 2 BASIC2.35□□□□□ -2.03
VPS13DQ5THJ4 FAM26F-203ENST00000368606 546 ntTSL 3 BASIC2.35□□□□□ -2.03
VPS13DQ5THJ4 MLLT3-201ENST00000380321 708 ntTSL 3 BASIC2.35□□□□□ -2.03
VPS13DQ5THJ4 POLR1D-202ENST00000399696 668 ntAPPRIS ALT1 TSL 5 BASIC2.35□□□□□ -2.03
VPS13DQ5THJ4 DPP10-AS3-201ENST00000417844 665 ntTSL 1 (best) BASIC2.35□□□□□ -2.03
VPS13DQ5THJ4 AF228730.2-201ENST00000438784 848 ntBASIC2.35□□□□□ -2.03
VPS13DQ5THJ4 AC069285.2-201ENST00000440210 275 ntBASIC2.35□□□□□ -2.03
VPS13DQ5THJ4 AC099563.1-201ENST00000456086 418 ntBASIC2.35□□□□□ -2.03
VPS13DQ5THJ4 RPL7P38-201ENST00000488396 739 ntBASIC2.35□□□□□ -2.03
VPS13DQ5THJ4 SNORA70.17-201ENST00000516449 133 ntBASIC2.35□□□□□ -2.03
VPS13DQ5THJ4 IGHV3-32-201ENST00000519182 355 ntBASIC2.35□□□□□ -2.03
VPS13DQ5THJ4 AP006245.1-201ENST00000522549 120 ntBASIC2.35□□□□□ -2.03
VPS13DQ5THJ4 AC008083.3-201ENST00000547777 329 ntTSL 3 BASIC2.35□□□□□ -2.03
VPS13DQ5THJ4 PPP3CB-AS1-206ENST00000595935 675 ntTSL 5 BASIC2.35□□□□□ -2.03
VPS13DQ5THJ4 SMAD5-AS1_2.1-201ENST00000617906 131 ntBASIC2.35□□□□□ -2.03
VPS13DQ5THJ4 MTFR1-203ENST00000458689 2500 ntTSL 1 (best) BASIC2.35□□□□□ -2.03
VPS13DQ5THJ4 SULF1-201ENST00000260128 5710 ntAPPRIS P1 TSL 5 BASIC2.35□□□□□ -2.03
VPS13DQ5THJ4 SCEL-202ENST00000377246 3081 ntAPPRIS ALT2 TSL 1 (best) BASIC2.35□□□□□ -2.03
VPS13DQ5THJ4 BRCA2-201ENST00000380152 11986 ntAPPRIS P1 TSL 5 BASIC2.35□□□□□ -2.03
VPS13DQ5THJ4 TBC1D31-214ENST00000522420 3167 ntTSL 1 (best) BASIC2.35□□□□□ -2.03
VPS13DQ5THJ4 SRGAP1-207ENST00000631006 8406 ntTSL 5 BASIC2.35□□□□□ -2.03
VPS13DQ5THJ4 TNRC6B-206ENST00000454349 18279 ntAPPRIS ALT2 TSL 2 BASIC2.35□□□□□ -2.03
VPS13DQ5THJ4 AL022322.2-201ENST00000624072 20397 ntBASIC2.35□□□□□ -2.03
VPS13DQ5THJ4 AC092111.2-201ENST00000611627 1414 ntBASIC2.35□□□□□ -2.03
VPS13DQ5THJ4 ADGRL3-216ENST00000514157 4789 ntTSL 5 BASIC2.35□□□□□ -2.03
VPS13DQ5THJ4 SETP9-201ENST00000423837 832 ntBASIC2.35□□□□□ -2.03
VPS13DQ5THJ4 HSPE1P16-201ENST00000426640 348 ntBASIC2.35□□□□□ -2.03
VPS13DQ5THJ4 AC108938.1-201ENST00000451204 136 ntBASIC2.35□□□□□ -2.03
VPS13DQ5THJ4 PLCE1-AS2-205ENST00000453183 427 ntTSL 5 BASIC2.35□□□□□ -2.03
VPS13DQ5THJ4 RPS26P15-201ENST00000488067 348 ntBASIC2.35□□□□□ -2.03
VPS13DQ5THJ4 LINC01088-205ENST00000509088 756 ntTSL 1 (best) BASIC2.35□□□□□ -2.03
VPS13DQ5THJ4 THUMPD3-AS1-210ENST00000519043 1115 ntTSL 3 BASIC2.35□□□□□ -2.03
VPS13DQ5THJ4 TRAV15-201ENST00000556680 249 ntBASIC2.35□□□□□ -2.03
VPS13DQ5THJ4 AC009019.1-202ENST00000568410 405 ntTSL 3 BASIC2.35□□□□□ -2.03
VPS13DQ5THJ4 AC118755.2-201ENST00000584676 212 ntTSL 3 BASIC2.35□□□□□ -2.03
VPS13DQ5THJ4 PCA3_2.1-201ENST00000612507 409 ntBASIC2.35□□□□□ -2.03
VPS13DQ5THJ4 AC069209.1-201ENST00000619282 651 ntBASIC2.35□□□□□ -2.03
VPS13DQ5THJ4 ARHGAP42-203ENST00000524892 5685 ntTSL 5 BASIC2.35□□□□□ -2.03
VPS13DQ5THJ4 BX322639.1-201ENST00000609841 6590 ntTSL 4 BASIC2.35□□□□□ -2.03
VPS13DQ5THJ4 AK9-202ENST00000355283 2499 ntTSL 1 (best) BASIC2.35□□□□□ -2.03
VPS13DQ5THJ4 KLHL13-208ENST00000541812 3102 ntTSL 2 BASIC2.35□□□□□ -2.03
VPS13DQ5THJ4 SAGE2P-201ENST00000420011 2126 ntBASIC2.35□□□□□ -2.03
VPS13DQ5THJ4 GTF2H1-204ENST00000524753 1510 ntTSL 3 BASIC2.35□□□□□ -2.03
VPS13DQ5THJ4 KCNJ16-203ENST00000392671 3981 ntAPPRIS P1 TSL 2 BASIC2.35□□□□□ -2.03
VPS13DQ5THJ4 LINC02393-202ENST00000614177 1993 ntTSL 2 BASIC2.35□□□□□ -2.03
VPS13DQ5THJ4 RFPL3S-202ENST00000382086 455 ntAPPRIS ALT2 TSL 2 BASIC2.35□□□□□ -2.03
VPS13DQ5THJ4 AC063979.1-201ENST00000415539 377 ntBASIC2.35□□□□□ -2.03
VPS13DQ5THJ4 AC092447.2-201ENST00000435487 669 ntBASIC2.35□□□□□ -2.03
VPS13DQ5THJ4 AC008892.1-201ENST00000511861 384 ntTSL 3 BASIC2.35□□□□□ -2.03
VPS13DQ5THJ4 SUMO2P20-201ENST00000520803 283 ntBASIC2.35□□□□□ -2.03
VPS13DQ5THJ4 IL18-204ENST00000528832 795 ntAPPRIS P3 TSL 3 BASIC2.35□□□□□ -2.03
VPS13DQ5THJ4 MIR2682-201ENST00000580305 110 ntBASIC2.35□□□□□ -2.03
VPS13DQ5THJ4 AC087749.2-201ENST00000583910 352 ntTSL 5 BASIC2.35□□□□□ -2.03
VPS13DQ5THJ4 AC007998.5-201ENST00000622938 237 ntBASIC2.35□□□□□ -2.03
VPS13DQ5THJ4 SCN2A-215ENST00000637266 8610 ntAPPRIS ALT1 TSL 5 BASIC2.35□□□□□ -2.03
VPS13DQ5THJ4 MYNN-203ENST00000544106 4815 ntTSL 1 (best) BASIC2.35□□□□□ -2.03
VPS13DQ5THJ4 AL445623.2-201ENST00000640307 4805 ntTSL 1 (best) BASIC2.35□□□□□ -2.03
VPS13DQ5THJ4 PPHLN1-208ENST00000449194 1583 ntAPPRIS ALT1 TSL 1 (best) BASIC2.35□□□□□ -2.03
VPS13DQ5THJ4 NCOA2-201ENST00000452400 8447 ntAPPRIS P1 TSL 1 (best) BASIC2.34□□□□□ -2.03
VPS13DQ5THJ4 ZRANB3-201ENST00000264159 4046 ntAPPRIS P3 TSL 1 (best) BASIC2.34□□□□□ -2.03
VPS13DQ5THJ4 AP003122.5-201ENST00000527668 3766 ntBASIC2.34□□□□□ -2.03
VPS13DQ5THJ4 PRUNE2-204ENST00000376718 12584 ntAPPRIS P3 TSL 5 BASIC2.34□□□□□ -2.03
VPS13DQ5THJ4 AL121839.2-201ENST00000565058 6943 ntBASIC2.34□□□□□ -2.03
VPS13DQ5THJ4 MTND4P22-201ENST00000413116 1169 ntBASIC2.34□□□□□ -2.03
VPS13DQ5THJ4 BX842559.1-201ENST00000419615 532 ntBASIC2.34□□□□□ -2.03
VPS13DQ5THJ4 PRKG1-AS1-202ENST00000426785 1111 ntTSL 1 (best) BASIC2.34□□□□□ -2.03
VPS13DQ5THJ4 C21orf91-OT1-202ENST00000430815 717 ntTSL 5 BASIC2.34□□□□□ -2.03
VPS13DQ5THJ4 BX119904.1-201ENST00000432026 348 ntBASIC2.34□□□□□ -2.03
VPS13DQ5THJ4 ATP5HP2-201ENST00000433885 485 ntBASIC2.34□□□□□ -2.03
VPS13DQ5THJ4 RNA5SP341-201ENST00000516261 117 ntBASIC2.34□□□□□ -2.03
VPS13DQ5THJ4 AL390838.2-201ENST00000602394 274 ntBASIC2.34□□□□□ -2.03
VPS13DQ5THJ4 KIAA1841-211ENST00000612149 4202 ntTSL 5 BASIC2.34□□□□□ -2.03
VPS13DQ5THJ4 Z95114.1-201ENST00000624264 14574 ntBASIC2.34□□□□□ -2.03
VPS13DQ5THJ4 OR7C1-203ENST00000641666 11711 ntAPPRIS P1 BASIC2.34□□□□□ -2.03
VPS13DQ5THJ4 SLAIN1-204ENST00000358679 2075 ntAPPRIS P3 TSL 2 BASIC2.34□□□□□ -2.03
VPS13DQ5THJ4 AC024940.1-203ENST00000398963 4423 ntAPPRIS ALT2 TSL 5 BASIC2.34□□□□□ -2.03
VPS13DQ5THJ4 TMEM38B-201ENST00000374688 3956 ntTSL 2 BASIC2.34□□□□□ -2.03
VPS13DQ5THJ4 DMXL2-202ENST00000449909 7465 ntAPPRIS ALT2 TSL 1 (best) BASIC2.34□□□□□ -2.03
Retrieved 100 of 98,524 protein–RNA pairs in 110.6 ms