Protein–RNA interactions for Protein: Q04837

SSBP1, Single-stranded DNA-binding protein, mitochondrial, humanhuman

Known RBP Predictions only

Length 148 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP1Q04837 AL356968.1-201ENST00000416622 474 ntBASIC2.96□□□□□ -1.94
SSBP1Q04837 PTP4A1P1-201ENST00000420539 515 ntBASIC2.96□□□□□ -1.94
SSBP1Q04837 AC245054.1-201ENST00000420944 258 ntBASIC2.96□□□□□ -1.94
SSBP1Q04837 AL591419.1-201ENST00000427423 339 ntBASIC2.96□□□□□ -1.94
SSBP1Q04837 LMO7DN-IT1-201ENST00000436872 321 ntTSL 3 BASIC2.96□□□□□ -1.94
SSBP1Q04837 AC097262.1-201ENST00000452559 548 ntBASIC2.96□□□□□ -1.94
SSBP1Q04837 AC016724.1-201ENST00000453215 421 ntBASIC2.96□□□□□ -1.94
SSBP1Q04837 AL158069.1-201ENST00000454131 455 ntTSL 5 BASIC2.96□□□□□ -1.94
SSBP1Q04837 RN7SL330P-201ENST00000469709 307 ntBASIC2.96□□□□□ -1.94
SSBP1Q04837 CMAHP-205ENST00000471416 1118 ntTSL 2 BASIC2.96□□□□□ -1.94
SSBP1Q04837 AC092185.1-201ENST00000491371 97 ntBASIC2.96□□□□□ -1.94
SSBP1Q04837 FTH1P24-201ENST00000503502 462 ntBASIC2.96□□□□□ -1.94
SSBP1Q04837 SCARNA14-201ENST00000516903 136 ntBASIC2.96□□□□□ -1.94
SSBP1Q04837 OR5AN2P-201ENST00000534535 896 ntBASIC2.96□□□□□ -1.94
SSBP1Q04837 LINC02277-201ENST00000553386 453 ntTSL 2 BASIC2.96□□□□□ -1.94
SSBP1Q04837 AC110023.1-201ENST00000554318 457 ntTSL 3 BASIC2.96□□□□□ -1.94
SSBP1Q04837 AC106028.2-201ENST00000555325 464 ntTSL 4 BASIC2.96□□□□□ -1.94
SSBP1Q04837 AC120057.2-201ENST00000571520 271 ntBASIC2.96□□□□□ -1.94
SSBP1Q04837 MIR4675-201ENST00000577898 77 ntBASIC2.96□□□□□ -1.94
SSBP1Q04837 AC011824.2-203ENST00000579975 633 ntTSL 3 BASIC2.96□□□□□ -1.94
SSBP1Q04837 AC211433.1-206ENST00000595409 733 ntTSL 5 BASIC2.96□□□□□ -1.94
SSBP1Q04837 AP2S1-210ENST00000601649 315 ntTSL 3 BASIC2.96□□□□□ -1.94
SSBP1Q04837 AL591034.3-201ENST00000605511 685 ntBASIC2.96□□□□□ -1.94
SSBP1Q04837 AC092653.1-201ENST00000608509 531 ntBASIC2.96□□□□□ -1.94
SSBP1Q04837 MIR6500-201ENST00000622700 86 ntBASIC2.96□□□□□ -1.94
SSBP1Q04837 FOXP2-227ENST00000638397 240 ntTSL 5 BASIC2.96□□□□□ -1.94
SSBP1Q04837 ARF4-206ENST00000489843 1360 ntTSL 3 BASIC2.96□□□□□ -1.94
SSBP1Q04837 AP000756.2-201ENST00000624168 2567 ntBASIC2.96□□□□□ -1.94
SSBP1Q04837 DMD-203ENST00000357033 13956 ntAPPRIS P3 TSL 1 (best) BASIC2.96□□□□□ -1.94
SSBP1Q04837 FAM35A-201ENST00000298784 3402 ntAPPRIS P1 TSL 2 BASIC2.96□□□□□ -1.94
SSBP1Q04837 BCLAF1P1-201ENST00000505813 2752 ntBASIC2.95□□□□□ -1.94
SSBP1Q04837 RLIMP1-201ENST00000339626 1680 ntBASIC2.95□□□□□ -1.94
SSBP1Q04837 AC093274.1-201ENST00000503488 5454 ntTSL 5 BASIC2.95□□□□□ -1.94
SSBP1Q04837 AC032011.1-201ENST00000611703 1549 ntBASIC2.95□□□□□ -1.94
SSBP1Q04837 SRP72P2-201ENST00000344851 1979 ntBASIC2.95□□□□□ -1.94
SSBP1Q04837 OR5T2-201ENST00000313264 1248 ntAPPRIS P2 BASIC2.95□□□□□ -1.94
SSBP1Q04837 OR56A4-201ENST00000330728 1209 ntBASIC2.95□□□□□ -1.94
SSBP1Q04837 SNORA62-201ENST00000365493 153 ntBASIC2.95□□□□□ -1.94
SSBP1Q04837 SNORA70E-201ENST00000384492 135 ntBASIC2.95□□□□□ -1.94
SSBP1Q04837 MIR192-201ENST00000384915 110 ntBASIC2.95□□□□□ -1.94
SSBP1Q04837 TRAJ16-201ENST00000390521 60 ntAPPRIS P1 BASIC2.95□□□□□ -1.94
SSBP1Q04837 AL035604.1-201ENST00000416481 531 ntTSL 3 BASIC2.95□□□□□ -1.94
SSBP1Q04837 AL356095.1-201ENST00000417217 199 ntBASIC2.95□□□□□ -1.94
SSBP1Q04837 AC006960.1-201ENST00000419980 153 ntBASIC2.95□□□□□ -1.94
SSBP1Q04837 RWDD4P2-201ENST00000426392 563 ntBASIC2.95□□□□□ -1.94
SSBP1Q04837 HSPE1P27-201ENST00000430808 296 ntBASIC2.95□□□□□ -1.94
SSBP1Q04837 HMGB3P11-201ENST00000440127 604 ntBASIC2.95□□□□□ -1.94
SSBP1Q04837 EIF2S2P2-201ENST00000447161 982 ntBASIC2.95□□□□□ -1.94
SSBP1Q04837 AC013460.1-205ENST00000450695 518 ntTSL 4 BASIC2.95□□□□□ -1.94
SSBP1Q04837 AC073636.1-202ENST00000457756 558 ntTSL 4 BASIC2.95□□□□□ -1.94
SSBP1Q04837 IQCJ-SCHIP1-AS1-201ENST00000460574 508 ntTSL 3 BASIC2.95□□□□□ -1.94
SSBP1Q04837 AC091564.1-201ENST00000464563 479 ntBASIC2.95□□□□□ -1.94
SSBP1Q04837 FAIM-205ENST00000464668 641 ntAPPRIS P3 TSL 5 BASIC2.95□□□□□ -1.94
SSBP1Q04837 RGS1-203ENST00000469578 1034 ntTSL 2 BASIC2.95□□□□□ -1.94
SSBP1Q04837 AC006463.2-201ENST00000473326 348 ntBASIC2.95□□□□□ -1.94
SSBP1Q04837 RWDD4P1-201ENST00000488019 565 ntBASIC2.95□□□□□ -1.94
SSBP1Q04837 SUB1-203ENST00000502897 562 ntAPPRIS P1 TSL 4 BASIC2.95□□□□□ -1.94
SSBP1Q04837 TBCA-206ENST00000518338 551 ntTSL 2 BASIC2.95□□□□□ -1.94
SSBP1Q04837 MIR670HG-201ENST00000533531 897 ntTSL 1 (best) BASIC2.95□□□□□ -1.94
SSBP1Q04837 AC027288.1-203ENST00000552167 567 ntTSL 4 BASIC2.95□□□□□ -1.94
SSBP1Q04837 FRMD6-AS2-202ENST00000557625 581 ntTSL 4 BASIC2.95□□□□□ -1.94
SSBP1Q04837 AC051619.4-201ENST00000560034 292 ntTSL 5 BASIC2.95□□□□□ -1.94
SSBP1Q04837 WDR7-OT1-201ENST00000592032 565 ntTSL 4 BASIC2.95□□□□□ -1.94
SSBP1Q04837 AC112200.1-201ENST00000625015 234 ntBASIC2.95□□□□□ -1.94
SSBP1Q04837 OR56A4-203ENST00000641279 1209 ntAPPRIS P1 BASIC2.95□□□□□ -1.94
SSBP1Q04837 CLOCK-201ENST00000309964 10304 ntAPPRIS P1 TSL 1 (best) BASIC2.95□□□□□ -1.94
SSBP1Q04837 MBNL1-206ENST00000357472 5256 ntTSL 5 BASIC2.95□□□□□ -1.94
SSBP1Q04837 MBNL1-223ENST00000498502 5258 ntTSL 5 BASIC2.95□□□□□ -1.94
SSBP1Q04837 OSBPL9P4-201ENST00000371707 1800 ntBASIC2.95□□□□□ -1.94
SSBP1Q04837 RIMS1-212ENST00000517827 3065 ntTSL 2 BASIC2.95□□□□□ -1.94
SSBP1Q04837 XKRY2-202ENST00000623874 1581 ntBASIC2.95□□□□□ -1.94
SSBP1Q04837 XKRY-202ENST00000624960 1581 ntBASIC2.95□□□□□ -1.94
SSBP1Q04837 MTND5P23-201ENST00000430812 1655 ntBASIC2.95□□□□□ -1.94
SSBP1Q04837 AC245100.2-201ENST00000454544 1679 ntBASIC2.95□□□□□ -1.94
SSBP1Q04837 OR10AB1P-202ENST00000641219 1686 ntBASIC2.95□□□□□ -1.94
SSBP1Q04837 MFSD8-236ENST00000641509 4050 ntBASIC2.94□□□□□ -1.94
SSBP1Q04837 NUDCD1-202ENST00000427660 2098 ntTSL 1 (best) BASIC2.94□□□□□ -1.94
SSBP1Q04837 FAM111A-207ENST00000531147 3996 ntAPPRIS P1 TSL 1 (best) BASIC2.94□□□□□ -1.94
SSBP1Q04837 ARAP2-210ENST00000618163 2592 ntTSL 5 BASIC2.94□□□□□ -1.94
SSBP1Q04837 RPL7P26-201ENST00000333817 754 ntBASIC2.94□□□□□ -1.94
SSBP1Q04837 RN7SKP103-201ENST00000363848 320 ntBASIC2.94□□□□□ -1.94
SSBP1Q04837 HNMT-204ENST00000410115 1150 ntAPPRIS P1 TSL 5 BASIC2.94□□□□□ -1.94
SSBP1Q04837 AC007899.1-201ENST00000412776 775 ntBASIC2.94□□□□□ -1.94
SSBP1Q04837 AL365277.2-201ENST00000415255 551 ntTSL 3 BASIC2.94□□□□□ -1.94
SSBP1Q04837 NPM1P48-201ENST00000436002 853 ntBASIC2.94□□□□□ -1.94
SSBP1Q04837 AL359378.1-201ENST00000439891 400 ntTSL 5 BASIC2.94□□□□□ -1.94
SSBP1Q04837 AC234781.1-201ENST00000444722 459 ntTSL 3 BASIC2.94□□□□□ -1.94
SSBP1Q04837 Z99127.3-201ENST00000448158 395 ntBASIC2.94□□□□□ -1.94
SSBP1Q04837 AL157359.1-201ENST00000449840 424 ntTSL 3 BASIC2.94□□□□□ -1.94
SSBP1Q04837 AL157400.3-201ENST00000449882 1298 ntTSL 5 BASIC2.94□□□□□ -1.94
SSBP1Q04837 AC011897.1-201ENST00000450715 346 ntTSL 3 BASIC2.94□□□□□ -1.94
SSBP1Q04837 AC239798.3-201ENST00000454459 408 ntBASIC2.94□□□□□ -1.94
SSBP1Q04837 RPL23AP12-201ENST00000467573 473 ntBASIC2.94□□□□□ -1.94
SSBP1Q04837 RNA5SP217-201ENST00000515959 91 ntBASIC2.94□□□□□ -1.94
SSBP1Q04837 LINC02451-202ENST00000548764 579 ntTSL 4 BASIC2.94□□□□□ -1.94
SSBP1Q04837 AC008126.1-201ENST00000549019 480 ntBASIC2.94□□□□□ -1.94
SSBP1Q04837 AC023510.1-201ENST00000555862 490 ntTSL 2 BASIC2.94□□□□□ -1.94
SSBP1Q04837 AC037487.4-201ENST00000577423 625 ntTSL 3 BASIC2.94□□□□□ -1.94
SSBP1Q04837 MIR5096-201ENST00000583713 70 ntBASIC2.94□□□□□ -1.94
SSBP1Q04837 LINC01482-203ENST00000589610 468 ntTSL 3 BASIC2.94□□□□□ -1.94
Retrieved 100 of 98,524 protein–RNA pairs in 82.7 ms