Protein–RNA interactions for Protein: P56159

GFRA1, GDNF family receptor alpha-1, humanhuman

Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GFRA1P56159 TM4SF1-AS1-201ENST00000484046 488 ntTSL 3 BASIC5.33□□□□□ -1.56
GFRA1P56159 RN7SL57P-201ENST00000493687 290 ntBASIC5.33□□□□□ -1.56
GFRA1P56159 AC114967.1-201ENST00000504890 259 ntBASIC5.33□□□□□ -1.56
GFRA1P56159 AC113346.1-201ENST00000510150 287 ntTSL 3 BASIC5.33□□□□□ -1.56
GFRA1P56159 TXNP6-201ENST00000510190 310 ntBASIC5.33□□□□□ -1.56
GFRA1P56159 AC097467.1-201ENST00000513660 370 ntTSL 5 BASIC5.33□□□□□ -1.56
GFRA1P56159 RFPL4AP5-201ENST00000514977 504 ntBASIC5.33□□□□□ -1.56
GFRA1P56159 SNORD46.2-201ENST00000516021 102 ntBASIC5.33□□□□□ -1.56
GFRA1P56159 RNU6-358P-201ENST00000516564 75 ntBASIC5.33□□□□□ -1.56
GFRA1P56159 Y_RNA.693-201ENST00000516641 110 ntBASIC5.33□□□□□ -1.56
GFRA1P56159 MTND1P35-201ENST00000526739 508 ntBASIC5.33□□□□□ -1.56
GFRA1P56159 AL354920.1-202ENST00000531661 1017 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
GFRA1P56159 PRR4-212ENST00000544994 326 ntAPPRIS ALT2 TSL 1 (best) BASIC5.33□□□□□ -1.56
GFRA1P56159 AC008083.3-201ENST00000547777 329 ntTSL 3 BASIC5.33□□□□□ -1.56
GFRA1P56159 AC068643.1-201ENST00000548594 755 ntTSL 5 BASIC5.33□□□□□ -1.56
GFRA1P56159 AC091078.2-201ENST00000557145 559 ntBASIC5.33□□□□□ -1.56
GFRA1P56159 AC027808.1-201ENST00000560873 683 ntTSL 3 BASIC5.33□□□□□ -1.56
GFRA1P56159 AC009120.4-201ENST00000564455 513 ntTSL 5 BASIC5.33□□□□□ -1.56
GFRA1P56159 AC107954.1-201ENST00000565906 727 ntBASIC5.33□□□□□ -1.56
GFRA1P56159 AC099489.2-201ENST00000574976 260 ntBASIC5.33□□□□□ -1.56
GFRA1P56159 AC053481.3-201ENST00000577881 843 ntBASIC5.33□□□□□ -1.56
GFRA1P56159 AP005119.2-201ENST00000579735 1105 ntBASIC5.33□□□□□ -1.56
GFRA1P56159 ZNF43-209ENST00000598288 560 ntTSL 4 BASIC5.33□□□□□ -1.56
GFRA1P56159 AL049634.3-201ENST00000604968 457 ntBASIC5.33□□□□□ -1.56
GFRA1P56159 AC145423.1-201ENST00000605712 336 ntBASIC5.33□□□□□ -1.56
GFRA1P56159 AL390208.1-201ENST00000605885 644 ntBASIC5.33□□□□□ -1.56
GFRA1P56159 AL133173.2-201ENST00000614270 90 ntBASIC5.33□□□□□ -1.56
GFRA1P56159 5_8S_rRNA.1-201ENST00000614365 152 ntBASIC5.33□□□□□ -1.56
GFRA1P56159 AL139099.4-201ENST00000614802 114 ntBASIC5.33□□□□□ -1.56
GFRA1P56159 MIR6864-201ENST00000617935 70 ntBASIC5.33□□□□□ -1.56
GFRA1P56159 EFCAB5-213ENST00000638539 168 ntTSL 5 BASIC5.33□□□□□ -1.56
GFRA1P56159 ERCC6-202ENST00000374127 1782 ntBASIC5.33□□□□□ -1.56
GFRA1P56159 PREPL-216ENST00000541738 6049 ntTSL 2 BASIC5.33□□□□□ -1.56
GFRA1P56159 AC092447.10-201ENST00000620607 1652 ntBASIC5.33□□□□□ -1.56
GFRA1P56159 LPAR4-201ENST00000435339 2611 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
GFRA1P56159 LINC01152-201ENST00000472655 3578 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
GFRA1P56159 PDE4D-202ENST00000317118 2599 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
GFRA1P56159 RNF145-206ENST00000519865 3478 ntAPPRIS P1 TSL 5 BASIC5.33□□□□□ -1.56
GFRA1P56159 NRCAM-210ENST00000425651 3915 ntAPPRIS ALT2 TSL 1 (best) BASIC5.33□□□□□ -1.56
GFRA1P56159 AL080276.2-201ENST00000637995 2090 ntTSL 3 BASIC5.33□□□□□ -1.56
GFRA1P56159 ZNF729-201ENST00000601693 3877 ntAPPRIS P1 TSL 2 BASIC5.33□□□□□ -1.56
GFRA1P56159 AL050403.1-201ENST00000448859 2006 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
GFRA1P56159 MUC4-215ENST00000475231 16273 ntAPPRIS ALT2 TSL 5 BASIC5.33□□□□□ -1.56
GFRA1P56159 AL590399.5-201ENST00000428709 3325 ntTSL 2 BASIC5.33□□□□□ -1.56
GFRA1P56159 MTERF1-201ENST00000351870 1997 ntAPPRIS P3 TSL 1 (best) BASIC5.33□□□□□ -1.56
GFRA1P56159 SSH1-202ENST00000326495 13040 ntAPPRIS P3 TSL 1 (best) BASIC5.33□□□□□ -1.56
GFRA1P56159 RAPH1-207ENST00000423104 1860 ntAPPRIS ALT2 TSL 5 BASIC5.32□□□□□ -1.56
GFRA1P56159 NAT1-201ENST00000307719 1815 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
GFRA1P56159 GTDC1-207ENST00000409298 2209 ntTSL 5 BASIC5.32□□□□□ -1.56
GFRA1P56159 CYLD-201ENST00000311559 5371 ntTSL 5 BASIC5.32□□□□□ -1.56
GFRA1P56159 MTND4P12-201ENST00000498999 1377 ntBASIC5.32□□□□□ -1.56
GFRA1P56159 CUZD1-205ENST00000368904 2903 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
GFRA1P56159 MTFR1-203ENST00000458689 2500 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
GFRA1P56159 FAM133A-201ENST00000322139 3292 ntAPPRIS P1 TSL 4 BASIC5.32□□□□□ -1.56
GFRA1P56159 RUBCNL-205ENST00000389908 3956 ntAPPRIS P3 TSL 2 BASIC5.32□□□□□ -1.56
GFRA1P56159 IL1RL1-201ENST00000233954 2058 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
GFRA1P56159 PLCH1-202ENST00000340059 6168 ntAPPRIS ALT2 TSL 1 (best) BASIC5.32□□□□□ -1.56
GFRA1P56159 FASTKD2-201ENST00000236980 3188 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
GFRA1P56159 DAZ2-203ENST00000382424 3853 ntAPPRIS ALT2 TSL 5 BASIC5.32□□□□□ -1.56
GFRA1P56159 LRRC69-201ENST00000343709 720 ntTSL 2 BASIC5.32□□□□□ -1.56
GFRA1P56159 RNA5SP510-201ENST00000364697 99 ntBASIC5.32□□□□□ -1.56
GFRA1P56159 OR2W1-201ENST00000377175 1028 ntAPPRIS P1 BASIC5.32□□□□□ -1.56
GFRA1P56159 PRH2-201ENST00000381847 641 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
GFRA1P56159 RNU6-1226P-201ENST00000384317 107 ntBASIC5.32□□□□□ -1.56
GFRA1P56159 MT-TL1-201ENST00000386347 75 ntBASIC5.32□□□□□ -1.56
GFRA1P56159 RPS3AP2-201ENST00000407190 754 ntBASIC5.32□□□□□ -1.56
GFRA1P56159 MTND3P17-201ENST00000416968 344 ntBASIC5.32□□□□□ -1.56
GFRA1P56159 AC016710.1-201ENST00000421326 466 ntTSL 3 BASIC5.32□□□□□ -1.56
GFRA1P56159 LINC01589-201ENST00000422971 548 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
GFRA1P56159 AC073283.2-202ENST00000426892 591 ntTSL 4 BASIC5.32□□□□□ -1.56
GFRA1P56159 MTND6P12-201ENST00000428247 522 ntBASIC5.32□□□□□ -1.56
GFRA1P56159 MTCO2P11-201ENST00000431069 680 ntBASIC5.32□□□□□ -1.56
GFRA1P56159 RPS12P17-201ENST00000438591 377 ntBASIC5.32□□□□□ -1.56
GFRA1P56159 AL138799.2-201ENST00000439024 343 ntTSL 2 BASIC5.32□□□□□ -1.56
GFRA1P56159 AC114485.1-201ENST00000447916 657 ntTSL 3 BASIC5.32□□□□□ -1.56
GFRA1P56159 AC132479.1-201ENST00000449160 144 ntBASIC5.32□□□□□ -1.56
GFRA1P56159 IQCG-204ENST00000453254 1230 ntTSL 2 BASIC5.32□□□□□ -1.56
GFRA1P56159 HMGB1P15-201ENST00000453854 435 ntBASIC5.32□□□□□ -1.56
GFRA1P56159 PPP1R11P1-201ENST00000486095 376 ntBASIC5.32□□□□□ -1.56
GFRA1P56159 AC087241.1-201ENST00000508615 429 ntTSL 5 BASIC5.32□□□□□ -1.56
GFRA1P56159 AC005920.2-201ENST00000509833 332 ntTSL 3 BASIC5.32□□□□□ -1.56
GFRA1P56159 AC027343.2-201ENST00000513219 343 ntTSL 3 BASIC5.32□□□□□ -1.56
GFRA1P56159 LINC02492-204ENST00000515660 584 ntTSL 2 BASIC5.32□□□□□ -1.56
GFRA1P56159 Vault.3-201ENST00000516676 95 ntBASIC5.32□□□□□ -1.56
GFRA1P56159 LINC00967-201ENST00000517689 792 ntTSL 5 BASIC5.32□□□□□ -1.56
GFRA1P56159 HGNC:24955-208ENST00000521585 1260 ntTSL 4 BASIC5.32□□□□□ -1.56
GFRA1P56159 SPAG11B-207ENST00000528168 481 ntTSL 5 BASIC5.32□□□□□ -1.56
GFRA1P56159 AC026894.1-201ENST00000532930 850 ntTSL 3 BASIC5.32□□□□□ -1.56
GFRA1P56159 FLVCR2-207ENST00000555027 938 ntTSL 3 BASIC5.32□□□□□ -1.56
GFRA1P56159 AL049779.3-201ENST00000557141 606 ntBASIC5.32□□□□□ -1.56
GFRA1P56159 TXNP4-201ENST00000575018 310 ntBASIC5.32□□□□□ -1.56
GFRA1P56159 MIR3614-201ENST00000581261 86 ntBASIC5.32□□□□□ -1.56
GFRA1P56159 LINC01791-201ENST00000589511 677 ntTSL 5 BASIC5.32□□□□□ -1.56
GFRA1P56159 SSX4B-201ENST00000595235 1221 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
GFRA1P56159 SSX4-201ENST00000595689 1221 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
GFRA1P56159 AL365503.1-201ENST00000605247 905 ntBASIC5.32□□□□□ -1.56
GFRA1P56159 AC121334.2-201ENST00000605387 271 ntBASIC5.32□□□□□ -1.56
GFRA1P56159 LINC00649-214ENST00000609132 668 ntTSL 5 BASIC5.32□□□□□ -1.56
GFRA1P56159 AL020991.1-201ENST00000612314 373 ntBASIC5.32□□□□□ -1.56
GFRA1P56159 AL355974.3-201ENST00000617383 467 ntBASIC5.32□□□□□ -1.56
Retrieved 100 of 98,524 protein–RNA pairs in 146.4 ms