Protein–RNA interactions for Protein: P54753

EPHB3, Ephrin type-B receptor 3, humanhuman

Predictions only

Length 998 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EPHB3P54753 LINC01152-201ENST00000472655 3578 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
EPHB3P54753 SLCO1C1-209ENST00000545604 2557 ntTSL 2 BASIC5.68□□□□□ -1.5
EPHB3P54753 RPGRIP1L-212ENST00000621565 6038 ntAPPRIS ALT1 TSL 1 (best) BASIC5.68□□□□□ -1.5
EPHB3P54753 ETV1-208ENST00000420159 6231 ntTSL 2 BASIC5.68□□□□□ -1.5
EPHB3P54753 UACA-211ENST00000560441 4723 ntAPPRIS ALT2 TSL 5 BASIC5.68□□□□□ -1.5
EPHB3P54753 NRDE2-201ENST00000354366 14208 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
EPHB3P54753 RUFY3-202ENST00000381006 3098 ntAPPRIS P1 TSL 5 BASIC5.68□□□□□ -1.5
EPHB3P54753 FTO-204ENST00000463855 3056 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
EPHB3P54753 DYNC1I2-207ENST00000410079 2159 ntTSL 2 BASIC5.68□□□□□ -1.5
EPHB3P54753 SLC1A3-201ENST00000265113 4170 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
EPHB3P54753 PLET1-201ENST00000338832 1215 ntAPPRIS P1 TSL 5 BASIC5.68□□□□□ -1.5
EPHB3P54753 ZBTB8OSP1-201ENST00000342688 498 ntBASIC5.68□□□□□ -1.5
EPHB3P54753 FAS-203ENST00000355279 983 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
EPHB3P54753 Y_RNA.160-201ENST00000363677 92 ntBASIC5.68□□□□□ -1.5
EPHB3P54753 RNU5F-7P-201ENST00000363696 115 ntBASIC5.68□□□□□ -1.5
EPHB3P54753 DUTP5-201ENST00000406790 469 ntBASIC5.68□□□□□ -1.5
EPHB3P54753 RNU6ATAC21P-201ENST00000408656 126 ntBASIC5.68□□□□□ -1.5
EPHB3P54753 AC109779.1-201ENST00000414475 573 ntTSL 5 BASIC5.68□□□□□ -1.5
EPHB3P54753 AIMP1P1-201ENST00000418670 937 ntBASIC5.68□□□□□ -1.5
EPHB3P54753 AC234781.4-201ENST00000419384 244 ntBASIC5.68□□□□□ -1.5
EPHB3P54753 RPA2P2-201ENST00000419698 796 ntBASIC5.68□□□□□ -1.5
EPHB3P54753 AC007742.1-201ENST00000425789 329 ntBASIC5.68□□□□□ -1.5
EPHB3P54753 HNRNPA3P4-201ENST00000427514 803 ntBASIC5.68□□□□□ -1.5
EPHB3P54753 RPL31P54-201ENST00000429803 370 ntBASIC5.68□□□□□ -1.5
EPHB3P54753 LINC00189-202ENST00000431661 308 ntTSL 5 BASIC5.68□□□□□ -1.5
EPHB3P54753 MTCYBP45-201ENST00000435243 565 ntBASIC5.68□□□□□ -1.5
EPHB3P54753 ELOCP26-201ENST00000436067 329 ntBASIC5.68□□□□□ -1.5
EPHB3P54753 AL807757.1-201ENST00000437846 424 ntTSL 3 BASIC5.68□□□□□ -1.5
EPHB3P54753 LINC00969-211ENST00000438608 525 ntTSL 5 BASIC5.68□□□□□ -1.5
EPHB3P54753 AL161937.1-201ENST00000444478 425 ntTSL 3 BASIC5.68□□□□□ -1.5
EPHB3P54753 PDSS1P2-201ENST00000449397 678 ntBASIC5.68□□□□□ -1.5
EPHB3P54753 AZGP1P2-201ENST00000454506 345 ntBASIC5.68□□□□□ -1.5
EPHB3P54753 SNRPFP4-201ENST00000456366 242 ntBASIC5.68□□□□□ -1.5
EPHB3P54753 OR52A4P-201ENST00000472867 958 ntBASIC5.68□□□□□ -1.5
EPHB3P54753 AC092754.1-201ENST00000472975 479 ntBASIC5.68□□□□□ -1.5
EPHB3P54753 AP000797.1-201ENST00000478870 387 ntBASIC5.68□□□□□ -1.5
EPHB3P54753 RN7SL826P-201ENST00000479724 288 ntBASIC5.68□□□□□ -1.5
EPHB3P54753 RN7SL808P-201ENST00000496066 299 ntBASIC5.68□□□□□ -1.5
EPHB3P54753 RPS17P5-201ENST00000498293 408 ntBASIC5.68□□□□□ -1.5
EPHB3P54753 AC079340.1-201ENST00000504799 552 ntTSL 4 BASIC5.68□□□□□ -1.5
EPHB3P54753 AC097480.1-201ENST00000509416 712 ntTSL 3 BASIC5.68□□□□□ -1.5
EPHB3P54753 HTN1-204ENST00000511674 623 ntAPPRIS P1 TSL 2 BASIC5.68□□□□□ -1.5
EPHB3P54753 SMIM18-201ENST00000517349 905 ntAPPRIS P1 TSL 2 BASIC5.68□□□□□ -1.5
EPHB3P54753 AC090193.1-201ENST00000518633 543 ntTSL 4 BASIC5.68□□□□□ -1.5
EPHB3P54753 AC105177.1-201ENST00000523110 555 ntTSL 4 BASIC5.68□□□□□ -1.5
EPHB3P54753 LINC02545-201ENST00000525381 306 ntTSL 3 BASIC5.68□□□□□ -1.5
EPHB3P54753 ATPAF1-210ENST00000532925 998 ntTSL 2 BASIC5.68□□□□□ -1.5
EPHB3P54753 AP004607.2-201ENST00000533949 322 ntBASIC5.68□□□□□ -1.5
EPHB3P54753 AC073530.1-201ENST00000535917 775 ntTSL 5 BASIC5.68□□□□□ -1.5
EPHB3P54753 AL355096.1-201ENST00000553561 447 ntTSL 3 BASIC5.68□□□□□ -1.5
EPHB3P54753 LINC00640-203ENST00000556479 576 ntTSL 2 BASIC5.68□□□□□ -1.5
EPHB3P54753 AL162872.1-201ENST00000557709 448 ntTSL 3 BASIC5.68□□□□□ -1.5
EPHB3P54753 AC005670.2-201ENST00000571841 889 ntAPPRIS P1 TSL 5 BASIC5.68□□□□□ -1.5
EPHB3P54753 NUFIP2-202ENST00000579665 559 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
EPHB3P54753 MIR3671-201ENST00000580455 88 ntBASIC5.68□□□□□ -1.5
EPHB3P54753 TTN-AS1-217ENST00000585625 945 ntTSL 5 BASIC5.68□□□□□ -1.5
EPHB3P54753 TTN-AS1-228ENST00000589234 751 ntTSL 5 BASIC5.68□□□□□ -1.5
EPHB3P54753 AC020910.2-201ENST00000603635 610 ntBASIC5.68□□□□□ -1.5
EPHB3P54753 DAOA-AS1_2.2-201ENST00000610818 204 ntBASIC5.68□□□□□ -1.5
EPHB3P54753 AC018628.1-201ENST00000624147 3819 ntBASIC5.68□□□□□ -1.5
EPHB3P54753 AP000648.2-201ENST00000624182 404 ntBASIC5.68□□□□□ -1.5
EPHB3P54753 ABBA01000935.2-201ENST00000637477 838 ntBASIC5.68□□□□□ -1.5
EPHB3P54753 YTHDC1-207ENST00000579690 2983 ntAPPRIS ALT2 TSL 5 BASIC5.68□□□□□ -1.5
EPHB3P54753 MYBPC1-221ENST00000551300 3934 ntAPPRIS ALT2 TSL 1 (best) BASIC5.68□□□□□ -1.5
EPHB3P54753 CCNB3-201ENST00000276014 4513 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
EPHB3P54753 AC107029.2-201ENST00000462011 2305 ntTSL 2 BASIC5.68□□□□□ -1.5
EPHB3P54753 MTCO1P6-201ENST00000481192 1384 ntBASIC5.67□□□□□ -1.5
EPHB3P54753 MSR1-204ENST00000381998 2826 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
EPHB3P54753 CXADR-205ENST00000400169 1445 ntAPPRIS ALT2 TSL 5 BASIC5.67□□□□□ -1.5
EPHB3P54753 EPHA4-202ENST00000409854 3454 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
EPHB3P54753 VCAN-201ENST00000265077 12625 ntAPPRIS P3 TSL 1 (best) BASIC5.67□□□□□ -1.5
EPHB3P54753 ELMO1-203ENST00000396045 2524 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
EPHB3P54753 OR13C4-201ENST00000277216 957 ntAPPRIS P1 BASIC5.67□□□□□ -1.5
EPHB3P54753 TTTY13-201ENST00000330337 659 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
EPHB3P54753 RPL21P132-201ENST00000331267 462 ntBASIC5.67□□□□□ -1.5
EPHB3P54753 OR51A7-201ENST00000359350 1048 ntAPPRIS P1 BASIC5.67□□□□□ -1.5
EPHB3P54753 RNU4-73P-201ENST00000363164 141 ntBASIC5.67□□□□□ -1.5
EPHB3P54753 RNU6-534P-201ENST00000364877 106 ntBASIC5.67□□□□□ -1.5
EPHB3P54753 SPANXN1-201ENST00000370493 1276 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
EPHB3P54753 MTCO3P40-201ENST00000392516 676 ntBASIC5.67□□□□□ -1.5
EPHB3P54753 AC007066.1-201ENST00000392902 381 ntBASIC5.67□□□□□ -1.5
EPHB3P54753 RPL31P1-201ENST00000398116 372 ntBASIC5.67□□□□□ -1.5
EPHB3P54753 RNF212B-201ENST00000399905 1071 ntTSL 5 BASIC5.67□□□□□ -1.5
EPHB3P54753 MIR1302-11-201ENST00000408051 138 ntBASIC5.67□□□□□ -1.5
EPHB3P54753 MIR1302-9-201ENST00000408365 138 ntBASIC5.67□□□□□ -1.5
EPHB3P54753 MIR1302-10-201ENST00000408734 138 ntBASIC5.67□□□□□ -1.5
EPHB3P54753 AP000357.1-201ENST00000409926 1165 ntBASIC5.67□□□□□ -1.5
EPHB3P54753 AL354766.2-201ENST00000414085 423 ntTSL 2 BASIC5.67□□□□□ -1.5
EPHB3P54753 LINC00993-201ENST00000420453 540 ntBASIC5.67□□□□□ -1.5
EPHB3P54753 AC092484.1-201ENST00000420548 833 ntTSL 5 BASIC5.67□□□□□ -1.5
EPHB3P54753 AC092647.1-201ENST00000420654 287 ntBASIC5.67□□□□□ -1.5
EPHB3P54753 TMEM196-203ENST00000422233 775 ntTSL 5 BASIC5.67□□□□□ -1.5
EPHB3P54753 AL136322.1-201ENST00000422250 548 ntTSL 4 BASIC5.67□□□□□ -1.5
EPHB3P54753 ELOCP14-201ENST00000428070 331 ntBASIC5.67□□□□□ -1.5
EPHB3P54753 ELOCP7-201ENST00000439968 331 ntBASIC5.67□□□□□ -1.5
EPHB3P54753 AC093019.1-201ENST00000443135 252 ntBASIC5.67□□□□□ -1.5
EPHB3P54753 RPS4XP4-201ENST00000443195 763 ntBASIC5.67□□□□□ -1.5
EPHB3P54753 LINC01474-202ENST00000449235 628 ntTSL 3 BASIC5.67□□□□□ -1.5
EPHB3P54753 LINC01767-201ENST00000451914 545 ntTSL 2 BASIC5.67□□□□□ -1.5
EPHB3P54753 AL645937.3-201ENST00000453647 936 ntBASIC5.67□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 76.7 ms