Protein–RNA interactions for Protein: P53667

LIMK1, LIM domain kinase 1, humanhuman

Predictions only

Length 647 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK1P53667 AC005261.4-201ENST00000600047 1385 ntBASIC4.54□□□□□ -1.68
LIMK1P53667 FGF12-204ENST00000445105 5406 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
LIMK1P53667 MTUS1-201ENST00000262102 6160 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
LIMK1P53667 MS4A14-208ENST00000531783 2910 ntAPPRIS ALT2 TSL 5 BASIC4.54□□□□□ -1.68
LIMK1P53667 DTNA-202ENST00000283365 6522 ntTSL 5 BASIC4.54□□□□□ -1.68
LIMK1P53667 AC106871.1-201ENST00000568324 3102 ntBASIC4.54□□□□□ -1.68
LIMK1P53667 ERICH3-AS1-202ENST00000612390 4874 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
LIMK1P53667 FAM111A-201ENST00000361723 3592 ntAPPRIS P1 TSL 2 BASIC4.54□□□□□ -1.68
LIMK1P53667 ENSAP3-201ENST00000312710 333 ntBASIC4.54□□□□□ -1.68
LIMK1P53667 IL6STP1-201ENST00000346911 1020 ntBASIC4.54□□□□□ -1.68
LIMK1P53667 MIR208A-201ENST00000362287 71 ntBASIC4.54□□□□□ -1.68
LIMK1P53667 RNU1-82P-201ENST00000390851 165 ntBASIC4.54□□□□□ -1.68
LIMK1P53667 PTMAP2-201ENST00000397627 327 ntBASIC4.54□□□□□ -1.68
LIMK1P53667 AL035405.1-201ENST00000400795 710 ntBASIC4.54□□□□□ -1.68
LIMK1P53667 AL355615.1-201ENST00000406187 641 ntBASIC4.54□□□□□ -1.68
LIMK1P53667 AC092745.2-202ENST00000411880 369 ntBASIC4.54□□□□□ -1.68
LIMK1P53667 DYNLL1P7-201ENST00000429273 258 ntBASIC4.54□□□□□ -1.68
LIMK1P53667 AC009478.1-201ENST00000429816 562 ntTSL 3 BASIC4.54□□□□□ -1.68
LIMK1P53667 AL645931.1-201ENST00000439737 410 ntBASIC4.54□□□□□ -1.68
LIMK1P53667 RRM2P4-201ENST00000441721 562 ntBASIC4.54□□□□□ -1.68
LIMK1P53667 LINC01704-202ENST00000442358 649 ntTSL 3 BASIC4.54□□□□□ -1.68
LIMK1P53667 LINC01431-201ENST00000442440 514 ntTSL 3 BASIC4.54□□□□□ -1.68
LIMK1P53667 GXYLT1P1-201ENST00000446657 490 ntBASIC4.54□□□□□ -1.68
LIMK1P53667 IMMP2L-205ENST00000450877 761 ntTSL 2 BASIC4.54□□□□□ -1.68
LIMK1P53667 FGF7P3-201ENST00000454645 303 ntBASIC4.54□□□□□ -1.68
LIMK1P53667 AC092832.2-201ENST00000456621 389 ntTSL 2 BASIC4.54□□□□□ -1.68
LIMK1P53667 AL589765.1-201ENST00000457548 386 ntTSL 2 BASIC4.54□□□□□ -1.68
LIMK1P53667 RPL23AP71-201ENST00000470966 469 ntBASIC4.54□□□□□ -1.68
LIMK1P53667 AC107027.1-201ENST00000503006 575 ntTSL 2 BASIC4.54□□□□□ -1.68
LIMK1P53667 DSTNP2-201ENST00000504533 515 ntBASIC4.54□□□□□ -1.68
LIMK1P53667 C1GALT1P2-201ENST00000510813 1104 ntBASIC4.54□□□□□ -1.68
LIMK1P53667 AC022679.1-202ENST00000520251 376 ntTSL 3 BASIC4.54□□□□□ -1.68
LIMK1P53667 AC083923.1-201ENST00000523708 376 ntBASIC4.54□□□□□ -1.68
LIMK1P53667 AC087894.1-201ENST00000538359 518 ntBASIC4.54□□□□□ -1.68
LIMK1P53667 AC135001.1-201ENST00000544546 283 ntBASIC4.54□□□□□ -1.68
LIMK1P53667 LINC02444-201ENST00000550723 1256 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
LIMK1P53667 AC022929.1-201ENST00000560675 823 ntTSL 3 BASIC4.54□□□□□ -1.68
LIMK1P53667 AC074237.1-201ENST00000577674 471 ntTSL 3 BASIC4.54□□□□□ -1.68
LIMK1P53667 AC006116.7-201ENST00000590141 756 ntBASIC4.54□□□□□ -1.68
LIMK1P53667 AC068620.3-201ENST00000602749 560 ntBASIC4.54□□□□□ -1.68
LIMK1P53667 OR7A19P-201ENST00000608051 733 ntBASIC4.54□□□□□ -1.68
LIMK1P53667 SNX18P1Y-201ENST00000616231 511 ntBASIC4.54□□□□□ -1.68
LIMK1P53667 AL079305.1-201ENST00000623159 3008 ntBASIC4.54□□□□□ -1.68
LIMK1P53667 SYTL2-217ENST00000528231 3536 ntAPPRIS ALT1 TSL 1 (best) BASIC4.54□□□□□ -1.68
LIMK1P53667 SYNE2-203ENST00000357395 21555 ntTSL 5 BASIC4.54□□□□□ -1.68
LIMK1P53667 EIF2AK2-201ENST00000233057 10042 ntAPPRIS P1 TSL 2 BASIC4.54□□□□□ -1.68
LIMK1P53667 CNTN5-212ENST00000619298 5734 ntTSL 5 BASIC4.54□□□□□ -1.68
LIMK1P53667 PAPPA-AS1-201ENST00000445861 2450 ntBASIC4.54□□□□□ -1.68
LIMK1P53667 ZBTB21-201ENST00000310826 7449 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
LIMK1P53667 OR8A1-203ENST00000641670 5709 ntAPPRIS P1 BASIC4.54□□□□□ -1.68
LIMK1P53667 PARP8-201ENST00000281631 7177 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
LIMK1P53667 AC108467.2-201ENST00000617640 1597 ntBASIC4.53□□□□□ -1.68
LIMK1P53667 SLC24A2-202ENST00000341998 10749 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
LIMK1P53667 EEF1A1P42-201ENST00000613436 1331 ntBASIC4.53□□□□□ -1.68
LIMK1P53667 RANBP6-201ENST00000259569 4576 ntAPPRIS P1 BASIC4.53□□□□□ -1.68
LIMK1P53667 C2CD6-204ENST00000450242 2571 ntAPPRIS ALT2 TSL 1 (best) BASIC4.53□□□□□ -1.68
LIMK1P53667 AC022031.1-201ENST00000585985 2593 ntBASIC4.53□□□□□ -1.68
LIMK1P53667 CLEC4A-201ENST00000229332 1281 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
LIMK1P53667 IL36B-201ENST00000259213 1186 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
LIMK1P53667 TRBV21OR9-2-201ENST00000331828 367 ntAPPRIS P1 BASIC4.53□□□□□ -1.68
LIMK1P53667 RNU6-543P-201ENST00000362576 108 ntBASIC4.53□□□□□ -1.68
LIMK1P53667 RNA5SP387-201ENST00000364226 106 ntBASIC4.53□□□□□ -1.68
LIMK1P53667 MTATP6P31-201ENST00000406985 692 ntBASIC4.53□□□□□ -1.68
LIMK1P53667 AC093158.1-201ENST00000415549 791 ntTSL 3 BASIC4.53□□□□□ -1.68
LIMK1P53667 AC010163.2-201ENST00000416341 381 ntTSL 2 BASIC4.53□□□□□ -1.68
LIMK1P53667 CDY14P-201ENST00000431260 1014 ntBASIC4.53□□□□□ -1.68
LIMK1P53667 NMNAT1P2-201ENST00000435192 860 ntBASIC4.53□□□□□ -1.68
LIMK1P53667 CDY12P-201ENST00000440679 1015 ntBASIC4.53□□□□□ -1.68
LIMK1P53667 CDY13P-201ENST00000445813 1015 ntBASIC4.53□□□□□ -1.68
LIMK1P53667 AC068135.1-201ENST00000446164 246 ntBASIC4.53□□□□□ -1.68
LIMK1P53667 AC108463.1-201ENST00000450258 347 ntBASIC4.53□□□□□ -1.68
LIMK1P53667 LINC00692-201ENST00000451284 932 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
LIMK1P53667 CDY23P-201ENST00000451661 1014 ntBASIC4.53□□□□□ -1.68
LIMK1P53667 AL603839.1-201ENST00000453437 432 ntTSL 2 BASIC4.53□□□□□ -1.68
LIMK1P53667 AC079168.2-201ENST00000453977 416 ntBASIC4.53□□□□□ -1.68
LIMK1P53667 SNRPGP5-201ENST00000456003 220 ntBASIC4.53□□□□□ -1.68
LIMK1P53667 SNORD108-201ENST00000459332 71 ntBASIC4.53□□□□□ -1.68
LIMK1P53667 AC104763.1-201ENST00000475274 360 ntBASIC4.53□□□□□ -1.68
LIMK1P53667 INPP4B-206ENST00000506217 673 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
LIMK1P53667 SNHG27-202ENST00000507933 491 ntTSL 2 BASIC4.53□□□□□ -1.68
LIMK1P53667 PARP4P3-201ENST00000510265 317 ntBASIC4.53□□□□□ -1.68
LIMK1P53667 AC112198.4-201ENST00000515450 351 ntBASIC4.53□□□□□ -1.68
LIMK1P53667 AC133634.1-201ENST00000517695 566 ntTSL 3 BASIC4.53□□□□□ -1.68
LIMK1P53667 AC068672.1-201ENST00000520391 328 ntTSL 3 BASIC4.53□□□□□ -1.68
LIMK1P53667 COX6B1P6-201ENST00000522347 255 ntBASIC4.53□□□□□ -1.68
LIMK1P53667 AC104115.2-201ENST00000523026 687 ntBASIC4.53□□□□□ -1.68
LIMK1P53667 AF117829.1-202ENST00000524166 836 ntTSL 3 BASIC4.53□□□□□ -1.68
LIMK1P53667 PTP4A1P6-201ENST00000531034 478 ntBASIC4.53□□□□□ -1.68
LIMK1P53667 AC010197.1-201ENST00000541860 578 ntTSL 4 BASIC4.53□□□□□ -1.68
LIMK1P53667 CYB5AP5-201ENST00000549779 389 ntBASIC4.53□□□□□ -1.68
LIMK1P53667 LINC02303-202ENST00000554711 531 ntTSL 3 BASIC4.53□□□□□ -1.68
LIMK1P53667 AGGF1P6-201ENST00000569213 976 ntBASIC4.53□□□□□ -1.68
LIMK1P53667 ZNF682-204ENST00000593468 581 ntTSL 4 BASIC4.53□□□□□ -1.68
LIMK1P53667 LINC00649-204ENST00000593977 640 ntTSL 5 BASIC4.53□□□□□ -1.68
LIMK1P53667 AL590235.2-201ENST00000602641 632 ntTSL 5 BASIC4.53□□□□□ -1.68
LIMK1P53667 HSPE1-MOB4-201ENST00000604458 890 ntAPPRIS P1 TSL 3 BASIC4.53□□□□□ -1.68
LIMK1P53667 AP003117.2-201ENST00000606010 545 ntBASIC4.53□□□□□ -1.68
LIMK1P53667 FRG1HP-204ENST00000617940 757 ntBASIC4.53□□□□□ -1.68
LIMK1P53667 AC243756.2-201ENST00000618406 463 ntBASIC4.53□□□□□ -1.68
LIMK1P53667 AL138955.1-201ENST00000622881 1040 ntBASIC4.53□□□□□ -1.68
Retrieved 100 of 98,524 protein–RNA pairs in 100.4 ms