Protein–RNA interactions for Protein: P52945

PDX1, Pancreas/duodenum homeobox protein 1, humanhuman

Predictions only

Length 283 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDX1P52945 DAOA-211ENST00000618629 1368 ntAPPRIS P3 TSL 5 BASIC4.29□□□□□ -1.72
PDX1P52945 KIF21A-201ENST00000361418 5044 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
PDX1P52945 WDFY3-201ENST00000295888 14247 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
PDX1P52945 CENPE-202ENST00000380026 8241 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
PDX1P52945 RNF38-201ENST00000259605 5012 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
PDX1P52945 AP1G1-207ENST00000564155 2723 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
PDX1P52945 LINC00622-201ENST00000562811 1570 ntBASIC4.29□□□□□ -1.72
PDX1P52945 ZNF29P-201ENST00000225587 168 ntBASIC4.29□□□□□ -1.72
PDX1P52945 LINC01967-201ENST00000356047 755 ntTSL 5 BASIC4.29□□□□□ -1.72
PDX1P52945 BMS1P3-201ENST00000372011 932 ntBASIC4.29□□□□□ -1.72
PDX1P52945 TRAV23DV6-201ENST00000390451 409 ntAPPRIS P1 BASIC4.29□□□□□ -1.72
PDX1P52945 AC025750.1-201ENST00000399891 379 ntBASIC4.29□□□□□ -1.72
PDX1P52945 MIR921-201ENST00000401133 56 ntBASIC4.29□□□□□ -1.72
PDX1P52945 RPL7P27-201ENST00000403775 720 ntBASIC4.29□□□□□ -1.72
PDX1P52945 RNU2-6P-201ENST00000411404 190 ntBASIC4.29□□□□□ -1.72
PDX1P52945 AL031674.1-202ENST00000413070 465 ntTSL 3 BASIC4.29□□□□□ -1.72
PDX1P52945 SNRPFP1-201ENST00000414761 252 ntBASIC4.29□□□□□ -1.72
PDX1P52945 AL034347.1-201ENST00000420766 835 ntTSL 3 BASIC4.29□□□□□ -1.72
PDX1P52945 AC099336.2-201ENST00000422457 254 ntBASIC4.29□□□□□ -1.72
PDX1P52945 MTCO2P17-201ENST00000424336 677 ntBASIC4.29□□□□□ -1.72
PDX1P52945 AL159174.1-202ENST00000425588 442 ntTSL 3 BASIC4.29□□□□□ -1.72
PDX1P52945 AL158073.1-201ENST00000426848 1104 ntBASIC4.29□□□□□ -1.72
PDX1P52945 RPS24P8-201ENST00000431490 402 ntBASIC4.29□□□□□ -1.72
PDX1P52945 RPL39L-202ENST00000433055 749 ntAPPRIS P1 TSL 2 BASIC4.29□□□□□ -1.72
PDX1P52945 Z80107.1-201ENST00000436830 412 ntBASIC4.29□□□□□ -1.72
PDX1P52945 AC009263.1-201ENST00000441193 1239 ntBASIC4.29□□□□□ -1.72
PDX1P52945 AL589765.3-201ENST00000446084 462 ntBASIC4.29□□□□□ -1.72
PDX1P52945 AL929288.2-201ENST00000446368 407 ntBASIC4.29□□□□□ -1.72
PDX1P52945 AP000844.1-201ENST00000446631 577 ntTSL 3 BASIC4.29□□□□□ -1.72
PDX1P52945 LINC01150-201ENST00000455671 315 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
PDX1P52945 AC099560.2-201ENST00000457554 255 ntBASIC4.29□□□□□ -1.72
PDX1P52945 AL035404.1-201ENST00000497982 568 ntBASIC4.29□□□□□ -1.72
PDX1P52945 AC010255.1-201ENST00000504829 731 ntTSL 5 BASIC4.29□□□□□ -1.72
PDX1P52945 CSN1S1-203ENST00000507763 597 ntAPPRIS ALT2 TSL 5 BASIC4.29□□□□□ -1.72
PDX1P52945 AC108475.1-201ENST00000507880 950 ntBASIC4.29□□□□□ -1.72
PDX1P52945 AC113420.1-201ENST00000507903 571 ntBASIC4.29□□□□□ -1.72
PDX1P52945 SLC25A15P5-201ENST00000508033 253 ntBASIC4.29□□□□□ -1.72
PDX1P52945 LINC02149-201ENST00000511443 558 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
PDX1P52945 AC097535.1-201ENST00000515263 332 ntTSL 3 BASIC4.29□□□□□ -1.72
PDX1P52945 RNU6-1028P-201ENST00000517164 93 ntBASIC4.29□□□□□ -1.72
PDX1P52945 MIR2116-201ENST00000517221 80 ntBASIC4.29□□□□□ -1.72
PDX1P52945 IGKV3OR22-2-201ENST00000517943 313 ntBASIC4.29□□□□□ -1.72
PDX1P52945 PCAT1-201ENST00000519319 734 ntTSL 2 BASIC4.29□□□□□ -1.72
PDX1P52945 IGKV2-36-201ENST00000519999 223 ntBASIC4.29□□□□□ -1.72
PDX1P52945 MTND2P32-201ENST00000521584 1038 ntBASIC4.29□□□□□ -1.72
PDX1P52945 AC023202.1-201ENST00000521681 491 ntTSL 3 BASIC4.29□□□□□ -1.72
PDX1P52945 LINC02375-201ENST00000545739 852 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
PDX1P52945 AC023034.1-201ENST00000558141 518 ntTSL 3 BASIC4.29□□□□□ -1.72
PDX1P52945 MIR4509-3-201ENST00000578671 94 ntBASIC4.29□□□□□ -1.72
PDX1P52945 MIR4509-2-201ENST00000583920 94 ntBASIC4.29□□□□□ -1.72
PDX1P52945 AC093227.2-201ENST00000589357 285 ntBASIC4.29□□□□□ -1.72
PDX1P52945 AC015849.3-201ENST00000603981 488 ntTSL 5 BASIC4.29□□□□□ -1.72
PDX1P52945 AL160237.3-201ENST00000604114 1013 ntBASIC4.29□□□□□ -1.72
PDX1P52945 Z82195.1-201ENST00000604558 398 ntBASIC4.29□□□□□ -1.72
PDX1P52945 AC073387.2-201ENST00000604797 784 ntBASIC4.29□□□□□ -1.72
PDX1P52945 AC113403.1-201ENST00000604910 193 ntBASIC4.29□□□□□ -1.72
PDX1P52945 BNIP3P4-201ENST00000604946 565 ntBASIC4.29□□□□□ -1.72
PDX1P52945 AC006946.3-201ENST00000609791 756 ntBASIC4.29□□□□□ -1.72
PDX1P52945 SNX18P1Y-201ENST00000616231 511 ntBASIC4.29□□□□□ -1.72
PDX1P52945 MIR4509-1-201ENST00000618224 94 ntBASIC4.29□□□□□ -1.72
PDX1P52945 MIR6891-201ENST00000618788 93 ntBASIC4.29□□□□□ -1.72
PDX1P52945 AC116563.2-201ENST00000624751 535 ntBASIC4.29□□□□□ -1.72
PDX1P52945 AC006065.6-201ENST00000625201 545 ntBASIC4.29□□□□□ -1.72
PDX1P52945 MIR492-201ENST00000638676 116 ntBASIC4.29□□□□□ -1.72
PDX1P52945 EEF1A1-211ENST00000615060 3508 ntTSL 5 BASIC4.29□□□□□ -1.72
PDX1P52945 CACNB4-273ENST00000638091 4061 ntTSL 5 BASIC4.29□□□□□ -1.72
PDX1P52945 BX005019.1-201ENST00000561881 1810 ntBASIC4.29□□□□□ -1.72
PDX1P52945 KIF23-206ENST00000558585 2296 ntTSL 2 BASIC4.29□□□□□ -1.72
PDX1P52945 AC025034.1-201ENST00000552778 1711 ntTSL 3 BASIC4.29□□□□□ -1.72
PDX1P52945 EYA4-202ENST00000355286 4317 ntAPPRIS ALT1 TSL 1 (best) BASIC4.29□□□□□ -1.72
PDX1P52945 ING3-201ENST00000315870 3777 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
PDX1P52945 CNTN6-205ENST00000446702 4513 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
PDX1P52945 KRTAP24-1-201ENST00000340345 1650 ntAPPRIS P1 BASIC4.29□□□□□ -1.72
PDX1P52945 HMBOX1-202ENST00000355231 1694 ntTSL 5 BASIC4.29□□□□□ -1.72
PDX1P52945 ASNSP1-204ENST00000641977 1664 ntBASIC4.29□□□□□ -1.72
PDX1P52945 CFHR3-201ENST00000367425 1645 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
PDX1P52945 MUC15-204ENST00000527569 1386 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
PDX1P52945 NUDCD1-202ENST00000427660 2098 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
PDX1P52945 VIP-202ENST00000367244 1584 ntAPPRIS P4 TSL 1 (best) BASIC4.28□□□□□ -1.72
PDX1P52945 MAPK10-303ENST00000641324 3959 ntBASIC4.28□□□□□ -1.72
PDX1P52945 IQGAP2-204ENST00000502745 3404 ntTSL 2 BASIC4.28□□□□□ -1.72
PDX1P52945 C1orf100-201ENST00000308105 579 ntAPPRIS P1 TSL 2 BASIC4.28□□□□□ -1.72
PDX1P52945 MIR383-201ENST00000362257 73 ntBASIC4.28□□□□□ -1.72
PDX1P52945 RNU6-1339P-201ENST00000363574 91 ntBASIC4.28□□□□□ -1.72
PDX1P52945 RN7SKP280-201ENST00000364196 304 ntBASIC4.28□□□□□ -1.72
PDX1P52945 RNU1-64P-201ENST00000365443 163 ntBASIC4.28□□□□□ -1.72
PDX1P52945 MLIP-203ENST00000370877 1234 ntAPPRIS ALT2 TSL 5 BASIC4.28□□□□□ -1.72
PDX1P52945 AL022722.2-201ENST00000402519 180 ntBASIC4.28□□□□□ -1.72
PDX1P52945 ZNF602P-201ENST00000405929 924 ntBASIC4.28□□□□□ -1.72
PDX1P52945 RNU6ATAC34P-201ENST00000408879 121 ntBASIC4.28□□□□□ -1.72
PDX1P52945 AL391645.1-201ENST00000417409 506 ntTSL 3 BASIC4.28□□□□□ -1.72
PDX1P52945 AC114814.2-201ENST00000419195 485 ntBASIC4.28□□□□□ -1.72
PDX1P52945 OSTCP5-201ENST00000425293 453 ntBASIC4.28□□□□□ -1.72
PDX1P52945 DARS-AS1-206ENST00000446492 488 ntTSL 3 BASIC4.28□□□□□ -1.72
PDX1P52945 AL359073.1-201ENST00000448036 403 ntBASIC4.28□□□□□ -1.72
PDX1P52945 AL589963.1-201ENST00000449282 727 ntTSL 3 BASIC4.28□□□□□ -1.72
PDX1P52945 AL354710.1-201ENST00000453641 246 ntBASIC4.28□□□□□ -1.72
PDX1P52945 AL021393.1-201ENST00000456740 539 ntTSL 5 BASIC4.28□□□□□ -1.72
PDX1P52945 DUXAP8-207ENST00000456786 622 ntBASIC4.28□□□□□ -1.72
PDX1P52945 AC022795.1-201ENST00000473808 480 ntBASIC4.28□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 93 ms