Protein–RNA interactions for Protein: P49238

CX3CR1, CX3C chemokine receptor 1, humanhuman

Predictions only

Length 355 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CX3CR1P49238 AC007599.1-201ENST00000568688 1174 ntBASIC3.59□□□□□ -1.83
CX3CR1P49238 AC079171.1-201ENST00000568788 914 ntBASIC3.59□□□□□ -1.83
CX3CR1P49238 AC128687.2-201ENST00000609657 566 ntBASIC3.59□□□□□ -1.83
CX3CR1P49238 AC006946.3-201ENST00000609791 756 ntBASIC3.59□□□□□ -1.83
CX3CR1P49238 MIR486-1-201ENST00000612171 68 ntBASIC3.59□□□□□ -1.83
CX3CR1P49238 AC092683.2-203ENST00000618807 788 ntTSL 5 BASIC3.59□□□□□ -1.83
CX3CR1P49238 PCBP1-AS1-307ENST00000627050 912 ntTSL 5 BASIC3.59□□□□□ -1.83
CX3CR1P49238 AL773545.4-201ENST00000637262 310 ntBASIC3.59□□□□□ -1.83
CX3CR1P49238 AL513478.4-201ENST00000641636 310 ntBASIC3.59□□□□□ -1.83
CX3CR1P49238 AC025125.1-201ENST00000624743 1922 ntBASIC3.59□□□□□ -1.83
CX3CR1P49238 DENND2C-203ENST00000393277 4730 ntTSL 5 BASIC3.59□□□□□ -1.83
CX3CR1P49238 KCNJ16-201ENST00000283936 4062 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.83
CX3CR1P49238 AC116667.1-201ENST00000604855 2072 ntBASIC3.59□□□□□ -1.83
CX3CR1P49238 PIGN-240ENST00000639912 6530 ntTSL 5 BASIC3.59□□□□□ -1.84
CX3CR1P49238 ZNF682-209ENST00000597972 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC3.59□□□□□ -1.84
CX3CR1P49238 PUS7L-207ENST00000551923 3313 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.84
CX3CR1P49238 EFR3A-208ENST00000637848 2547 ntTSL 5 BASIC3.59□□□□□ -1.84
CX3CR1P49238 AC025034.1-201ENST00000552778 1711 ntTSL 3 BASIC3.58□□□□□ -1.84
CX3CR1P49238 AL356489.2-201ENST00000566968 3528 ntBASIC3.58□□□□□ -1.84
CX3CR1P49238 STEAP4-202ENST00000380079 9988 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
CX3CR1P49238 C6orf10-209ENST00000612031 2179 ntAPPRIS ALT2 TSL 5 BASIC3.58□□□□□ -1.84
CX3CR1P49238 AGBL2-201ENST00000357610 3295 ntAPPRIS ALT2 TSL 5 BASIC3.58□□□□□ -1.84
CX3CR1P49238 C8orf34-202ENST00000337103 3652 ntAPPRIS ALT2 TSL 1 (best) BASIC3.58□□□□□ -1.84
CX3CR1P49238 MIR1303-201ENST00000408625 86 ntBASIC3.58□□□□□ -1.84
CX3CR1P49238 FAR2P2-201ENST00000413041 594 ntBASIC3.58□□□□□ -1.84
CX3CR1P49238 PRELID3BP11-201ENST00000414230 479 ntBASIC3.58□□□□□ -1.84
CX3CR1P49238 AC108681.1-202ENST00000417384 589 ntTSL 4 BASIC3.58□□□□□ -1.84
CX3CR1P49238 RPL31P45-201ENST00000419532 356 ntBASIC3.58□□□□□ -1.84
CX3CR1P49238 AC245028.1-201ENST00000423259 256 ntBASIC3.58□□□□□ -1.84
CX3CR1P49238 TAF1A-AS1-202ENST00000427540 750 ntTSL 2 BASIC3.58□□□□□ -1.84
CX3CR1P49238 AC068287.1-201ENST00000430283 295 ntBASIC3.58□□□□□ -1.84
CX3CR1P49238 AL162419.1-201ENST00000440674 873 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
CX3CR1P49238 BMS1P22-202ENST00000440946 1160 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
CX3CR1P49238 AC006011.1-201ENST00000442758 349 ntBASIC3.58□□□□□ -1.84
CX3CR1P49238 RNA5SP246-201ENST00000458909 119 ntBASIC3.58□□□□□ -1.84
CX3CR1P49238 AC041039.1-201ENST00000485656 536 ntBASIC3.58□□□□□ -1.84
CX3CR1P49238 AC025674.1-201ENST00000507074 324 ntBASIC3.58□□□□□ -1.84
CX3CR1P49238 AC108475.1-201ENST00000507880 950 ntBASIC3.58□□□□□ -1.84
CX3CR1P49238 KRT19P6-201ENST00000510983 209 ntBASIC3.58□□□□□ -1.84
CX3CR1P49238 GYPA-208ENST00000512064 441 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
CX3CR1P49238 AC099522.1-202ENST00000514718 367 ntBASIC3.58□□□□□ -1.84
CX3CR1P49238 SNORA48.9-201ENST00000516419 162 ntBASIC3.58□□□□□ -1.84
CX3CR1P49238 AC004923.2-201ENST00000529649 369 ntBASIC3.58□□□□□ -1.84
CX3CR1P49238 AC087897.2-201ENST00000552639 678 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
CX3CR1P49238 MIR4330-201ENST00000579077 105 ntBASIC3.58□□□□□ -1.84
CX3CR1P49238 AC127540.1-201ENST00000580311 689 ntTSL 5 BASIC3.58□□□□□ -1.84
CX3CR1P49238 AC012417.1-201ENST00000582307 1039 ntBASIC3.58□□□□□ -1.84
CX3CR1P49238 MIR5096-201ENST00000583713 70 ntBASIC3.58□□□□□ -1.84
CX3CR1P49238 AL157938.2-208ENST00000590461 877 ntTSL 5 BASIC3.58□□□□□ -1.84
CX3CR1P49238 AC015911.9-201ENST00000591634 185 ntTSL 5 BASIC3.58□□□□□ -1.84
CX3CR1P49238 CEACAM7-204ENST00000602225 524 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
CX3CR1P49238 AL355802.4-201ENST00000607635 548 ntBASIC3.58□□□□□ -1.84
CX3CR1P49238 AL121890.3-201ENST00000618494 516 ntBASIC3.58□□□□□ -1.84
CX3CR1P49238 TEX41-265ENST00000627785 704 ntTSL 5 BASIC3.58□□□□□ -1.84
CX3CR1P49238 RIMS1-206ENST00000425662 2799 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
CX3CR1P49238 HSPA8P19-201ENST00000505359 1517 ntBASIC3.58□□□□□ -1.84
CX3CR1P49238 AC053481.2-202ENST00000582394 1500 ntBASIC3.58□□□□□ -1.84
CX3CR1P49238 IQCH-206ENST00000546225 3112 ntTSL 5 BASIC3.58□□□□□ -1.84
CX3CR1P49238 LINC00283-201ENST00000430111 1947 ntTSL 5 BASIC3.58□□□□□ -1.84
CX3CR1P49238 NTS-201ENST00000256010 1237 ntAPPRIS P1 TSL 1 (best) BASIC3.57□□□□□ -1.84
CX3CR1P49238 HNMT-201ENST00000280096 504 ntTSL 1 (best) BASIC3.57□□□□□ -1.84
CX3CR1P49238 SPINK1-201ENST00000296695 542 ntAPPRIS P1 TSL 1 (best) BASIC3.57□□□□□ -1.84
CX3CR1P49238 MIR383-201ENST00000362257 73 ntBASIC3.57□□□□□ -1.84
CX3CR1P49238 RNA5SP366-201ENST00000365454 123 ntBASIC3.57□□□□□ -1.84
CX3CR1P49238 TUBD1-204ENST00000376094 1154 ntTSL 1 (best) BASIC3.57□□□□□ -1.84
CX3CR1P49238 MIR585-201ENST00000384887 94 ntBASIC3.57□□□□□ -1.84
CX3CR1P49238 ABCA12-202ENST00000389661 7005 ntTSL 1 (best) BASIC3.57□□□□□ -1.84
CX3CR1P49238 U3.22-201ENST00000391120 215 ntBASIC3.57□□□□□ -1.84
CX3CR1P49238 AL161909.1-201ENST00000397390 712 ntBASIC3.57□□□□□ -1.84
CX3CR1P49238 ZNF594-201ENST00000399604 4862 ntAPPRIS P1 BASIC3.57□□□□□ -1.84
CX3CR1P49238 RPL23AP26-201ENST00000412728 464 ntBASIC3.57□□□□□ -1.84
CX3CR1P49238 AMD1P2-201ENST00000412936 992 ntBASIC3.57□□□□□ -1.84
CX3CR1P49238 RPL26P29-201ENST00000415623 438 ntBASIC3.57□□□□□ -1.84
CX3CR1P49238 NUDCD1-202ENST00000427660 2098 ntTSL 1 (best) BASIC3.57□□□□□ -1.84
CX3CR1P49238 AC008065.1-201ENST00000428525 348 ntBASIC3.57□□□□□ -1.84
CX3CR1P49238 DNAJC19P7-201ENST00000428811 344 ntBASIC3.57□□□□□ -1.84
CX3CR1P49238 BTF3P10-201ENST00000433415 495 ntBASIC3.57□□□□□ -1.84
CX3CR1P49238 FKBP7-205ENST00000434643 666 ntAPPRIS ALT2 TSL 1 (best) BASIC3.57□□□□□ -1.84
CX3CR1P49238 USP9YP7-201ENST00000436723 430 ntBASIC3.57□□□□□ -1.84
CX3CR1P49238 NUDT7-202ENST00000437314 930 ntTSL 1 (best) BASIC3.57□□□□□ -1.84
CX3CR1P49238 DIAPH2-AS1-201ENST00000439759 971 ntTSL 3 BASIC3.57□□□□□ -1.84
CX3CR1P49238 AL033380.1-201ENST00000442781 421 ntTSL 2 BASIC3.57□□□□□ -1.84
CX3CR1P49238 VN1R25P-201ENST00000443385 738 ntBASIC3.57□□□□□ -1.84
CX3CR1P49238 AL929236.1-201ENST00000443622 518 ntTSL 3 BASIC3.57□□□□□ -1.84
CX3CR1P49238 AC097499.1-201ENST00000444277 208 ntBASIC3.57□□□□□ -1.84
CX3CR1P49238 USP9YP32-201ENST00000452432 430 ntBASIC3.57□□□□□ -1.84
CX3CR1P49238 MTND3P4-201ENST00000453537 303 ntBASIC3.57□□□□□ -1.84
CX3CR1P49238 VN1R40P-201ENST00000455196 941 ntBASIC3.57□□□□□ -1.84
CX3CR1P49238 RPL7P1-201ENST00000468161 747 ntBASIC3.57□□□□□ -1.84
CX3CR1P49238 RPL7P9-201ENST00000468715 747 ntBASIC3.57□□□□□ -1.84
CX3CR1P49238 IFT80-220ENST00000483465 4044 ntTSL 1 (best) BASIC3.57□□□□□ -1.84
CX3CR1P49238 AC108156.1-201ENST00000507849 481 ntTSL 3 BASIC3.57□□□□□ -1.84
CX3CR1P49238 AC079921.1-201ENST00000509449 946 ntTSL 3 BASIC3.57□□□□□ -1.84
CX3CR1P49238 AC108866.1-202ENST00000511064 573 ntTSL 4 BASIC3.57□□□□□ -1.84
CX3CR1P49238 TATDN1-202ENST00000517678 815 ntTSL 3 BASIC3.57□□□□□ -1.84
CX3CR1P49238 AC099805.1-203ENST00000518177 773 ntTSL 2 BASIC3.57□□□□□ -1.84
CX3CR1P49238 IGHV3-32-201ENST00000519182 355 ntBASIC3.57□□□□□ -1.84
CX3CR1P49238 COX6B1P6-201ENST00000522347 255 ntBASIC3.57□□□□□ -1.84
CX3CR1P49238 AP003110.1-201ENST00000526976 717 ntTSL 1 (best) BASIC3.57□□□□□ -1.84
CX3CR1P49238 AC140847.1-201ENST00000538025 534 ntTSL 4 BASIC3.57□□□□□ -1.84
Retrieved 100 of 98,524 protein–RNA pairs in 85 ms