Protein–RNA interactions for Protein: P48061

CXCL12, Stromal cell-derived factor 1, humanhuman

Predictions only

Length 93 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL12P48061 RPL5P30-201ENST00000465511 891 ntBASIC3.81□□□□□ -1.8
CXCL12P48061 AC107015.1-201ENST00000466902 747 ntBASIC3.81□□□□□ -1.8
CXCL12P48061 MIR1302-2HG-201ENST00000469289 535 ntTSL 5 BASIC3.81□□□□□ -1.8
CXCL12P48061 AGGF1P3-201ENST00000493675 1213 ntBASIC3.81□□□□□ -1.8
CXCL12P48061 AC108467.1-201ENST00000515623 672 ntTSL 3 BASIC3.81□□□□□ -1.8
CXCL12P48061 LINC02446-201ENST00000544591 868 ntTSL 2 BASIC3.81□□□□□ -1.8
CXCL12P48061 PSMA3-213ENST00000557508 814 ntTSL 5 BASIC3.81□□□□□ -1.8
CXCL12P48061 AC012409.1-201ENST00000560176 358 ntTSL 3 BASIC3.81□□□□□ -1.8
CXCL12P48061 OR7M1P-201ENST00000608946 533 ntBASIC3.81□□□□□ -1.8
CXCL12P48061 AL159169.2-201ENST00000610061 1269 ntBASIC3.81□□□□□ -1.8
CXCL12P48061 C8orf89-203ENST00000625134 507 ntAPPRIS ALT2 TSL 1 (best) BASIC3.81□□□□□ -1.8
CXCL12P48061 TTN-AS1-267ENST00000628826 662 ntTSL 5 BASIC3.81□□□□□ -1.8
CXCL12P48061 PCBP1-AS1-348ENST00000629506 667 ntTSL 5 BASIC3.81□□□□□ -1.8
CXCL12P48061 CUL4B-202ENST00000371322 4902 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
CXCL12P48061 TDRD1-202ENST00000369280 4062 ntAPPRIS ALT2 TSL 5 BASIC3.81□□□□□ -1.8
CXCL12P48061 RANBP2-201ENST00000283195 11711 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
CXCL12P48061 ABCC9-201ENST00000261200 8293 ntAPPRIS P5 TSL 5 BASIC3.8□□□□□ -1.8
CXCL12P48061 C9orf57-201ENST00000377024 1502 ntAPPRIS P2 TSL 1 (best) BASIC3.8□□□□□ -1.8
CXCL12P48061 GABRG2-214ENST00000639111 11735 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
CXCL12P48061 ANKRD36C-202ENST00000456556 5428 ntAPPRIS P1 TSL 5 BASIC3.8□□□□□ -1.8
CXCL12P48061 OR2H1-203ENST00000377136 3024 ntAPPRIS P1 BASIC3.8□□□□□ -1.8
CXCL12P48061 CAPS2-206ENST00000409799 1859 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
CXCL12P48061 KCNIP4-207ENST00000509207 1301 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
CXCL12P48061 ZNF705A-204ENST00000610508 3378 ntAPPRIS P1 TSL 5 BASIC3.8□□□□□ -1.8
CXCL12P48061 MARCH1-201ENST00000274056 5367 ntAPPRIS P1 TSL 4 BASIC3.8□□□□□ -1.8
CXCL12P48061 OR10J6P-201ENST00000289731 930 ntBASIC3.8□□□□□ -1.8
CXCL12P48061 MIR490-201ENST00000384865 128 ntBASIC3.8□□□□□ -1.8
CXCL12P48061 RPL7P60-201ENST00000397636 735 ntBASIC3.8□□□□□ -1.8
CXCL12P48061 HNMT-204ENST00000410115 1150 ntAPPRIS P1 TSL 5 BASIC3.8□□□□□ -1.8
CXCL12P48061 BX842559.1-201ENST00000419615 532 ntBASIC3.8□□□□□ -1.8
CXCL12P48061 MTCO1P51-201ENST00000427672 1060 ntBASIC3.8□□□□□ -1.8
CXCL12P48061 LINC00348-201ENST00000428761 948 ntTSL 3 BASIC3.8□□□□□ -1.8
CXCL12P48061 SKP1P3-201ENST00000429280 487 ntBASIC3.8□□□□□ -1.8
CXCL12P48061 AL355340.1-201ENST00000433085 344 ntTSL 3 BASIC3.8□□□□□ -1.8
CXCL12P48061 AL117341.1-201ENST00000437213 373 ntTSL 5 BASIC3.8□□□□□ -1.8
CXCL12P48061 MTOR-AS1-202ENST00000445982 705 ntTSL 5 BASIC3.8□□□□□ -1.8
CXCL12P48061 TIFA-202ENST00000500655 769 ntAPPRIS P1 TSL 3 BASIC3.8□□□□□ -1.8
CXCL12P48061 AC019133.1-201ENST00000508292 420 ntTSL 3 BASIC3.8□□□□□ -1.8
CXCL12P48061 RN7SKP13-201ENST00000515933 244 ntBASIC3.8□□□□□ -1.8
CXCL12P48061 AC110288.1-201ENST00000517950 446 ntTSL 3 BASIC3.8□□□□□ -1.8
CXCL12P48061 AC102945.1-201ENST00000522640 407 ntTSL 2 BASIC3.8□□□□□ -1.8
CXCL12P48061 AC100770.1-201ENST00000532310 322 ntBASIC3.8□□□□□ -1.8
CXCL12P48061 AC110023.1-201ENST00000554318 457 ntTSL 3 BASIC3.8□□□□□ -1.8
CXCL12P48061 CFL2-206ENST00000556161 546 ntTSL 4 BASIC3.8□□□□□ -1.8
CXCL12P48061 AL121839.1-201ENST00000556233 1185 ntBASIC3.8□□□□□ -1.8
CXCL12P48061 MIR4298-201ENST00000584380 73 ntBASIC3.8□□□□□ -1.8
CXCL12P48061 AC115621.1-201ENST00000604653 858 ntBASIC3.8□□□□□ -1.8
CXCL12P48061 AC015922.4-201ENST00000612568 690 ntBASIC3.8□□□□□ -1.8
CXCL12P48061 AL591424.2-201ENST00000617023 128 ntBASIC3.8□□□□□ -1.8
CXCL12P48061 AC022106.2-201ENST00000620114 757 ntBASIC3.8□□□□□ -1.8
CXCL12P48061 SCARNA15.3-201ENST00000626315 122 ntBASIC3.8□□□□□ -1.8
CXCL12P48061 RMDN2-AS1-204ENST00000626669 448 ntTSL 5 BASIC3.8□□□□□ -1.8
CXCL12P48061 SCARNA4.1-201ENST00000628597 123 ntBASIC3.8□□□□□ -1.8
CXCL12P48061 CCNYL2-203ENST00000638057 730 ntTSL 3 BASIC3.8□□□□□ -1.8
CXCL12P48061 C20orf24-208ENST00000639924 351 ntTSL 5 BASIC3.8□□□□□ -1.8
CXCL12P48061 AC119674.1-207ENST00000641355 633 ntBASIC3.8□□□□□ -1.8
CXCL12P48061 GABRG2-222ENST00000639975 3662 ntTSL 5 BASIC3.8□□□□□ -1.8
CXCL12P48061 CNOT1-201ENST00000317147 8471 ntAPPRIS P3 TSL 1 (best) BASIC3.8□□□□□ -1.8
CXCL12P48061 USP34-201ENST00000398571 11357 ntAPPRIS P1 TSL 5 BASIC3.8□□□□□ -1.8
CXCL12P48061 PMS1-215ENST00000447232 2576 ntTSL 2 BASIC3.8□□□□□ -1.8
CXCL12P48061 PLCB4-206ENST00000414679 3947 ntAPPRIS ALT1 TSL 5 BASIC3.8□□□□□ -1.8
CXCL12P48061 GHR-208ENST00000612382 4699 ntAPPRIS P1 TSL 5 BASIC3.8□□□□□ -1.8
CXCL12P48061 LINC01566-202ENST00000569242 2801 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
CXCL12P48061 UGT2A3-201ENST00000251566 2965 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
CXCL12P48061 PARP8-201ENST00000281631 7177 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
CXCL12P48061 ZRANB3-201ENST00000264159 4046 ntAPPRIS P3 TSL 1 (best) BASIC3.79□□□□□ -1.8
CXCL12P48061 PCDH15-214ENST00000395446 3948 ntTSL 5 BASIC3.79□□□□□ -1.8
CXCL12P48061 DDX60L-207ENST00000505890 4568 ntTSL 2 BASIC3.79□□□□□ -1.8
CXCL12P48061 AC007685.1-201ENST00000329806 452 ntBASIC3.79□□□□□ -1.8
CXCL12P48061 COX7B2-201ENST00000355591 542 ntAPPRIS P2 TSL 1 (best) BASIC3.79□□□□□ -1.8
CXCL12P48061 RNU6-178P-201ENST00000384631 104 ntBASIC3.79□□□□□ -1.8
CXCL12P48061 AC004870.4-201ENST00000424359 360 ntTSL 2 BASIC3.79□□□□□ -1.8
CXCL12P48061 LINC01745-201ENST00000430921 372 ntTSL 5 BASIC3.79□□□□□ -1.8
CXCL12P48061 ISM1-AS1-201ENST00000431407 652 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
CXCL12P48061 AL451129.1-201ENST00000437471 285 ntTSL 3 BASIC3.79□□□□□ -1.8
CXCL12P48061 RN7SL807P-201ENST00000470923 297 ntBASIC3.79□□□□□ -1.8
CXCL12P48061 AC006517.1-201ENST00000480485 328 ntBASIC3.79□□□□□ -1.8
CXCL12P48061 AC098583.1-201ENST00000480875 255 ntBASIC3.79□□□□□ -1.8
CXCL12P48061 AC109464.3-201ENST00000509456 204 ntTSL 5 BASIC3.79□□□□□ -1.8
CXCL12P48061 AL049544.1-201ENST00000511849 673 ntTSL 3 BASIC3.79□□□□□ -1.8
CXCL12P48061 AC018442.3-201ENST00000523025 183 ntBASIC3.79□□□□□ -1.8
CXCL12P48061 AC007458.1-201ENST00000542812 373 ntBASIC3.79□□□□□ -1.8
CXCL12P48061 NCAPGP2-201ENST00000557911 754 ntBASIC3.79□□□□□ -1.8
CXCL12P48061 AC009292.2-201ENST00000558889 291 ntTSL 5 BASIC3.79□□□□□ -1.8
CXCL12P48061 AC009137.2-201ENST00000568179 641 ntTSL 3 BASIC3.79□□□□□ -1.8
CXCL12P48061 AC106782.4-201ENST00000568264 210 ntBASIC3.79□□□□□ -1.8
CXCL12P48061 AC104534.1-201ENST00000594558 566 ntTSL 4 BASIC3.79□□□□□ -1.8
CXCL12P48061 MIR4458HG-202ENST00000605918 1057 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
CXCL12P48061 SNORD91B-202ENST00000608459 222 ntBASIC3.79□□□□□ -1.8
CXCL12P48061 AC107905.1-201ENST00000616204 426 ntBASIC3.79□□□□□ -1.8
CXCL12P48061 AC023509.5-201ENST00000617434 807 ntBASIC3.79□□□□□ -1.8
CXCL12P48061 CDKN2B-AS_3.1-201ENST00000617587 144 ntBASIC3.79□□□□□ -1.8
CXCL12P48061 TEX41-265ENST00000627785 704 ntTSL 5 BASIC3.79□□□□□ -1.8
CXCL12P48061 TEX41-280ENST00000629185 591 ntTSL 5 BASIC3.79□□□□□ -1.8
CXCL12P48061 DDX4-211ENST00000511853 1984 ntTSL 2 BASIC3.79□□□□□ -1.8
CXCL12P48061 RBMS1-203ENST00000409075 1550 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
CXCL12P48061 STON1-GTF2A1L-201ENST00000394751 3534 ntTSL 2 BASIC3.79□□□□□ -1.8
CXCL12P48061 PCDH11X-206ENST00000373097 9146 ntAPPRIS ALT2 TSL 1 (best) BASIC3.79□□□□□ -1.8
CXCL12P48061 AC123767.1-201ENST00000519537 1439 ntTSL 5 BASIC3.78□□□□□ -1.8
CXCL12P48061 AC020637.1-201ENST00000546977 1447 ntTSL 5 BASIC3.78□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 103.8 ms