Protein–RNA interactions for Protein: P18858

LIG1, DNA ligase 1, humanhuman

Predictions only

Length 919 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1P18858 LINC01620-204ENST00000623295 700 ntTSL 1 (best) BASIC6.44□□□□□ -1.38
LIG1P18858 FER-210ENST00000628534 558 ntTSL 5 BASIC6.44□□□□□ -1.38
LIG1P18858 OFD1P9Y-201ENST00000417699 1491 ntBASIC6.44□□□□□ -1.38
LIG1P18858 ATL2-202ENST00000402054 1883 ntTSL 5 BASIC6.44□□□□□ -1.38
LIG1P18858 ZNF571-203ENST00000451802 2265 ntAPPRIS P1 TSL 1 (best) BASIC6.44□□□□□ -1.38
LIG1P18858 NAV2-AS5-201ENST00000528726 3307 ntTSL 1 (best) BASIC6.44□□□□□ -1.38
LIG1P18858 DDX58-201ENST00000379868 4089 ntTSL 5 BASIC6.44□□□□□ -1.38
LIG1P18858 SLITRK4-202ENST00000356928 3074 ntAPPRIS P1 TSL 2 BASIC6.44□□□□□ -1.38
LIG1P18858 UGT2B26P-201ENST00000508672 1613 ntBASIC6.43□□□□□ -1.38
LIG1P18858 CXADR-205ENST00000400169 1445 ntAPPRIS ALT2 TSL 5 BASIC6.43□□□□□ -1.38
LIG1P18858 GABRG2-203ENST00000414552 3927 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
LIG1P18858 AC022893.1-201ENST00000517664 3549 ntTSL 2 BASIC6.43□□□□□ -1.38
LIG1P18858 DPP8-203ENST00000341861 8699 ntAPPRIS P4 TSL 2 BASIC6.43□□□□□ -1.38
LIG1P18858 AL159987.1-201ENST00000347911 293 ntBASIC6.43□□□□□ -1.38
LIG1P18858 DEFB125-201ENST00000382410 587 ntAPPRIS P1 TSL 1 (best) BASIC6.43□□□□□ -1.38
LIG1P18858 AC079809.1-201ENST00000415468 276 ntBASIC6.43□□□□□ -1.38
LIG1P18858 AC092634.4-201ENST00000419937 423 ntTSL 3 BASIC6.43□□□□□ -1.38
LIG1P18858 TTTY21B-201ENST00000421353 307 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
LIG1P18858 AL445123.1-201ENST00000422023 446 ntTSL 2 BASIC6.43□□□□□ -1.38
LIG1P18858 AC018832.1-201ENST00000428171 566 ntTSL 4 BASIC6.43□□□□□ -1.38
LIG1P18858 TTTY21-201ENST00000430228 307 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
LIG1P18858 RPL21P110-201ENST00000433345 446 ntBASIC6.43□□□□□ -1.38
LIG1P18858 AC073614.1-201ENST00000438690 650 ntBASIC6.43□□□□□ -1.38
LIG1P18858 AL831737.1-201ENST00000441288 271 ntBASIC6.43□□□□□ -1.38
LIG1P18858 RPL39P6-201ENST00000448289 150 ntBASIC6.43□□□□□ -1.38
LIG1P18858 RPL31P15-201ENST00000449770 338 ntBASIC6.43□□□□□ -1.38
LIG1P18858 AP001439.1-201ENST00000455275 392 ntTSL 2 BASIC6.43□□□□□ -1.38
LIG1P18858 snoU109.1-201ENST00000459339 135 ntBASIC6.43□□□□□ -1.38
LIG1P18858 AHI1-208ENST00000488690 712 ntTSL 5 BASIC6.43□□□□□ -1.38
LIG1P18858 AC019235.1-201ENST00000503847 207 ntBASIC6.43□□□□□ -1.38
LIG1P18858 AC104071.1-201ENST00000505636 602 ntTSL 3 BASIC6.43□□□□□ -1.38
LIG1P18858 IL7R-204ENST00000506850 1004 ntTSL 2 BASIC6.43□□□□□ -1.38
LIG1P18858 AC108078.1-201ENST00000508073 725 ntBASIC6.43□□□□□ -1.38
LIG1P18858 AC115622.1-201ENST00000509628 587 ntTSL 3 BASIC6.43□□□□□ -1.38
LIG1P18858 MTCYBP43-201ENST00000513621 740 ntBASIC6.43□□□□□ -1.38
LIG1P18858 snoU109.6-201ENST00000516831 118 ntBASIC6.43□□□□□ -1.38
LIG1P18858 SNORA70.20-201ENST00000516848 126 ntBASIC6.43□□□□□ -1.38
LIG1P18858 MTCO2P4-201ENST00000517968 247 ntBASIC6.43□□□□□ -1.38
LIG1P18858 AC048387.1-201ENST00000518428 494 ntTSL 3 BASIC6.43□□□□□ -1.38
LIG1P18858 AC079600.1-201ENST00000550326 297 ntBASIC6.43□□□□□ -1.38
LIG1P18858 AL355076.2-201ENST00000555736 544 ntTSL 5 BASIC6.43□□□□□ -1.38
LIG1P18858 AL390334.1-201ENST00000556395 450 ntBASIC6.43□□□□□ -1.38
LIG1P18858 AC068722.1-202ENST00000559600 655 ntTSL 3 BASIC6.43□□□□□ -1.38
LIG1P18858 AC025580.2-205ENST00000559960 552 ntTSL 4 BASIC6.43□□□□□ -1.38
LIG1P18858 AP005119.2-201ENST00000579735 1105 ntBASIC6.43□□□□□ -1.38
LIG1P18858 AC008752.3-201ENST00000588113 712 ntBASIC6.43□□□□□ -1.38
LIG1P18858 AL161729.4-201ENST00000604650 476 ntBASIC6.43□□□□□ -1.38
LIG1P18858 AL359880.1-201ENST00000621879 266 ntBASIC6.43□□□□□ -1.38
LIG1P18858 AP003122.6-201ENST00000623831 495 ntBASIC6.43□□□□□ -1.38
LIG1P18858 AC021106.3-201ENST00000623925 531 ntBASIC6.43□□□□□ -1.38
LIG1P18858 AC079228.1-201ENST00000624774 1049 ntBASIC6.43□□□□□ -1.38
LIG1P18858 ITGA9-AS1-218ENST00000630762 751 ntTSL 5 BASIC6.43□□□□□ -1.38
LIG1P18858 MIR6863-201ENST00000636112 90 ntBASIC6.43□□□□□ -1.38
LIG1P18858 MKKS-204ENST00000639674 192 ntBASIC6.43□□□□□ -1.38
LIG1P18858 PREPL-201ENST00000260648 3672 ntAPPRIS P1 TSL 1 (best) BASIC6.43□□□□□ -1.38
LIG1P18858 TEX11-201ENST00000344304 2977 ntAPPRIS P3 TSL 5 BASIC6.43□□□□□ -1.38
LIG1P18858 AC107982.1-201ENST00000507171 1300 ntBASIC6.43□□□□□ -1.38
LIG1P18858 AL138828.1-203ENST00000419926 1570 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
LIG1P18858 BBOX1-202ENST00000525090 1596 ntAPPRIS P1 TSL 1 (best) BASIC6.43□□□□□ -1.38
LIG1P18858 NUF2-202ENST00000367900 1842 ntAPPRIS P1 TSL 1 (best) BASIC6.43□□□□□ -1.38
LIG1P18858 AL353784.1-201ENST00000422842 2300 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
LIG1P18858 ZFX-211ENST00000539115 6801 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
LIG1P18858 SEC31A-204ENST00000355196 4104 ntAPPRIS P4 TSL 2 BASIC6.43□□□□□ -1.38
LIG1P18858 AL157756.1-201ENST00000532515 2859 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
LIG1P18858 FCRL2-203ENST00000368181 1669 ntTSL 1 (best) BASIC6.42□□□□□ -1.38
LIG1P18858 CCT8P1-201ENST00000413611 1657 ntBASIC6.42□□□□□ -1.38
LIG1P18858 NDUFA5-207ENST00000471770 5608 ntTSL 1 (best) BASIC6.42□□□□□ -1.38
LIG1P18858 CFHR3-206ENST00000617219 1462 ntTSL 5 BASIC6.42□□□□□ -1.38
LIG1P18858 MYBPC1-216ENST00000550270 3426 ntAPPRIS ALT2 TSL 5 BASIC6.42□□□□□ -1.38
LIG1P18858 PTPRD-202ENST00000356435 9472 ntAPPRIS P1 TSL 5 BASIC6.42□□□□□ -1.38
LIG1P18858 RNU6-1066P-201ENST00000363573 105 ntBASIC6.42□□□□□ -1.38
LIG1P18858 RNU1-74P-201ENST00000384108 171 ntBASIC6.42□□□□□ -1.38
LIG1P18858 Y_RNA.573-201ENST00000384763 105 ntBASIC6.42□□□□□ -1.38
LIG1P18858 AL031985.1-201ENST00000392713 418 ntBASIC6.42□□□□□ -1.38
LIG1P18858 RPL23AP47-201ENST00000408017 460 ntBASIC6.42□□□□□ -1.38
LIG1P18858 AC062039.1-201ENST00000414394 565 ntTSL 2 BASIC6.42□□□□□ -1.38
LIG1P18858 AC004882.2-201ENST00000420180 244 ntTSL 5 BASIC6.42□□□□□ -1.38
LIG1P18858 B3GALNT1P1-201ENST00000420569 975 ntBASIC6.42□□□□□ -1.38
LIG1P18858 AL357833.2-201ENST00000426811 430 ntTSL 3 BASIC6.42□□□□□ -1.38
LIG1P18858 AL136231.1-201ENST00000429407 730 ntBASIC6.42□□□□□ -1.38
LIG1P18858 TMEM183AP1-205ENST00000432739 290 ntBASIC6.42□□□□□ -1.38
LIG1P18858 CLUHP1-201ENST00000435012 1190 ntBASIC6.42□□□□□ -1.38
LIG1P18858 AL096855.1-202ENST00000444276 439 ntTSL 2 BASIC6.42□□□□□ -1.38
LIG1P18858 ANKRD30BP3-201ENST00000444850 1070 ntBASIC6.42□□□□□ -1.38
LIG1P18858 AL589765.3-201ENST00000446084 462 ntBASIC6.42□□□□□ -1.38
LIG1P18858 AL035551.1-201ENST00000446931 348 ntBASIC6.42□□□□□ -1.38
LIG1P18858 LINC01474-202ENST00000449235 628 ntTSL 3 BASIC6.42□□□□□ -1.38
LIG1P18858 GAPDHP14-201ENST00000450472 937 ntBASIC6.42□□□□□ -1.38
LIG1P18858 RPL10P17-201ENST00000453852 316 ntBASIC6.42□□□□□ -1.38
LIG1P18858 SLC9A9-AS1-201ENST00000479030 518 ntTSL 5 BASIC6.42□□□□□ -1.38
LIG1P18858 RPL32P33-201ENST00000487023 394 ntBASIC6.42□□□□□ -1.38
LIG1P18858 ADGRL3-AS1-202ENST00000504135 542 ntTSL 5 BASIC6.42□□□□□ -1.38
LIG1P18858 AF250324.1-203ENST00000508156 517 ntTSL 3 BASIC6.42□□□□□ -1.38
LIG1P18858 AC109481.1-201ENST00000509173 282 ntBASIC6.42□□□□□ -1.38
LIG1P18858 AC008728.1-201ENST00000512730 691 ntTSL 2 BASIC6.42□□□□□ -1.38
LIG1P18858 AC026719.2-201ENST00000515656 295 ntTSL 3 BASIC6.42□□□□□ -1.38
LIG1P18858 IGLVIV-64-201ENST00000518581 301 ntBASIC6.42□□□□□ -1.38
LIG1P18858 MINCR-206ENST00000524335 499 ntTSL 2 BASIC6.42□□□□□ -1.38
LIG1P18858 OR52E8-201ENST00000537935 1061 ntAPPRIS P1 BASIC6.42□□□□□ -1.38
LIG1P18858 LINC02423-202ENST00000542577 460 ntTSL 3 BASIC6.42□□□□□ -1.38
Retrieved 100 of 98,524 protein–RNA pairs in 115 ms