Protein–RNA interactions for Protein: P0C875

FAM228B, Protein FAM228B, humanhuman

Predictions only

Length 321 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FAM228BP0C875 AC009623.2-201ENST00000522524 465 ntTSL 3 BASIC3.89□□□□□ -1.79
FAM228BP0C875 AC013437.1-201ENST00000549878 414 ntTSL 3 BASIC3.89□□□□□ -1.79
FAM228BP0C875 MED6-207ENST00000554963 975 ntAPPRIS ALT1 TSL 5 BASIC3.89□□□□□ -1.79
FAM228BP0C875 AL133383.1-201ENST00000569292 901 ntTSL 1 (best) BASIC3.89□□□□□ -1.79
FAM228BP0C875 HNRNPCP4-201ENST00000571636 900 ntBASIC3.89□□□□□ -1.79
FAM228BP0C875 AC004147.1-201ENST00000580658 299 ntTSL 3 BASIC3.89□□□□□ -1.79
FAM228BP0C875 CT45A3-201ENST00000597510 1076 ntAPPRIS P1 TSL 1 (best) BASIC3.89□□□□□ -1.79
FAM228BP0C875 AC115621.1-201ENST00000604653 858 ntBASIC3.89□□□□□ -1.79
FAM228BP0C875 CT45A2-201ENST00000605791 1076 ntAPPRIS P1 TSL 1 (best) BASIC3.89□□□□□ -1.79
FAM228BP0C875 AC017076.1-201ENST00000607613 578 ntBASIC3.89□□□□□ -1.79
FAM228BP0C875 AC006338.2-201ENST00000616864 791 ntBASIC3.89□□□□□ -1.79
FAM228BP0C875 CT45A5-202ENST00000617203 726 ntAPPRIS P1 TSL 1 (best) BASIC3.89□□□□□ -1.79
FAM228BP0C875 MIR6875-201ENST00000617506 72 ntBASIC3.89□□□□□ -1.79
FAM228BP0C875 AL732618.1-201ENST00000623251 301 ntBASIC3.89□□□□□ -1.79
FAM228BP0C875 UBE2E2-207ENST00000628311 267 ntTSL 5 BASIC3.89□□□□□ -1.79
FAM228BP0C875 AL136084.2-203ENST00000630758 690 ntTSL 5 BASIC3.89□□□□□ -1.79
FAM228BP0C875 U2SURP-214ENST00000493598 3491 ntTSL 5 BASIC3.89□□□□□ -1.79
FAM228BP0C875 AC007529.1-201ENST00000418574 2178 ntBASIC3.89□□□□□ -1.79
FAM228BP0C875 NCAM2-201ENST00000284894 4699 ntAPPRIS ALT2 TSL 5 BASIC3.89□□□□□ -1.79
FAM228BP0C875 IFI16-201ENST00000295809 2867 ntAPPRIS ALT2 TSL 5 BASIC3.88□□□□□ -1.79
FAM228BP0C875 MBNL1-220ENST00000493459 4205 ntTSL 1 (best) BASIC3.88□□□□□ -1.79
FAM228BP0C875 MFSD8-236ENST00000641509 4050 ntBASIC3.88□□□□□ -1.79
FAM228BP0C875 AL049555.1-201ENST00000562834 1933 ntBASIC3.88□□□□□ -1.79
FAM228BP0C875 SCEL-205ENST00000535157 3096 ntAPPRIS ALT2 TSL 2 BASIC3.88□□□□□ -1.79
FAM228BP0C875 SNORA62.2-201ENST00000364672 152 ntBASIC3.88□□□□□ -1.79
FAM228BP0C875 AL136116.1-201ENST00000403591 381 ntBASIC3.88□□□□□ -1.79
FAM228BP0C875 SNORA81-201ENST00000408493 178 ntBASIC3.88□□□□□ -1.79
FAM228BP0C875 AL159169.1-201ENST00000421119 127 ntBASIC3.88□□□□□ -1.79
FAM228BP0C875 LINC01934-202ENST00000424170 686 ntTSL 4 BASIC3.88□□□□□ -1.79
FAM228BP0C875 AC010890.1-202ENST00000432414 535 ntTSL 3 BASIC3.88□□□□□ -1.79
FAM228BP0C875 RPL12P46-201ENST00000436610 195 ntBASIC3.88□□□□□ -1.79
FAM228BP0C875 LMO7DN-IT1-201ENST00000436872 321 ntTSL 3 BASIC3.88□□□□□ -1.79
FAM228BP0C875 MTND6P32-201ENST00000457611 483 ntBASIC3.88□□□□□ -1.79
FAM228BP0C875 HMGB3P14-201ENST00000494195 599 ntBASIC3.88□□□□□ -1.79
FAM228BP0C875 AC092546.1-202ENST00000505628 499 ntTSL 2 BASIC3.88□□□□□ -1.79
FAM228BP0C875 C5orf46-203ENST00000515291 573 ntAPPRIS ALT1 TSL 1 (best) BASIC3.88□□□□□ -1.79
FAM228BP0C875 SNORA70.14-201ENST00000516205 110 ntBASIC3.88□□□□□ -1.79
FAM228BP0C875 NR1H4-204ENST00000546380 565 ntTSL 3 BASIC3.88□□□□□ -1.79
FAM228BP0C875 AL132780.1-201ENST00000548819 556 ntTSL 4 BASIC3.88□□□□□ -1.79
FAM228BP0C875 AC027281.1-201ENST00000574178 758 ntBASIC3.88□□□□□ -1.79
FAM228BP0C875 ZNF230-204ENST00000585632 579 ntTSL 2 BASIC3.88□□□□□ -1.79
FAM228BP0C875 AC006504.5-201ENST00000588122 655 ntTSL 5 BASIC3.88□□□□□ -1.79
FAM228BP0C875 AC011461.1-201ENST00000592671 357 ntTSL 3 BASIC3.88□□□□□ -1.79
FAM228BP0C875 Z82195.1-201ENST00000604558 398 ntBASIC3.88□□□□□ -1.79
FAM228BP0C875 AL391261.4-201ENST00000616012 481 ntBASIC3.88□□□□□ -1.79
FAM228BP0C875 AL354798.1-201ENST00000622505 329 ntBASIC3.88□□□□□ -1.79
FAM228BP0C875 TEX41-280ENST00000629185 591 ntTSL 5 BASIC3.88□□□□□ -1.79
FAM228BP0C875 AC134980.1-211ENST00000638243 1094 ntTSL 2 BASIC3.88□□□□□ -1.79
FAM228BP0C875 EXOC5P1-201ENST00000510543 1969 ntBASIC3.88□□□□□ -1.79
FAM228BP0C875 ZNF483-201ENST00000309235 3655 ntAPPRIS P1 TSL 1 (best) BASIC3.88□□□□□ -1.79
FAM228BP0C875 RNF17-201ENST00000255324 5119 ntAPPRIS P1 TSL 2 BASIC3.88□□□□□ -1.79
FAM228BP0C875 ADAM28-201ENST00000265769 7052 ntAPPRIS P1 TSL 1 (best) BASIC3.87□□□□□ -1.79
FAM228BP0C875 AL445437.1-201ENST00000623157 3087 ntBASIC3.87□□□□□ -1.79
FAM228BP0C875 OR2L3-202ENST00000641161 2830 ntAPPRIS P1 BASIC3.87□□□□□ -1.79
FAM228BP0C875 FAM71D-211ENST00000612183 1790 ntAPPRIS P1 TSL 2 BASIC3.87□□□□□ -1.79
FAM228BP0C875 PPBP-201ENST00000296028 715 ntAPPRIS P1 TSL 1 (best) BASIC3.87□□□□□ -1.79
FAM228BP0C875 OR2B3-201ENST00000377173 1106 ntAPPRIS P1 BASIC3.87□□□□□ -1.79
FAM228BP0C875 KLRC3-201ENST00000381903 798 ntAPPRIS P3 TSL 1 (best) BASIC3.87□□□□□ -1.79
FAM228BP0C875 AL049693.1-201ENST00000402760 611 ntBASIC3.87□□□□□ -1.79
FAM228BP0C875 AL391807.1-202ENST00000419979 534 ntTSL 2 BASIC3.87□□□□□ -1.79
FAM228BP0C875 COX6CP17-201ENST00000421389 185 ntBASIC3.87□□□□□ -1.79
FAM228BP0C875 AC017083.1-201ENST00000428093 483 ntBASIC3.87□□□□□ -1.79
FAM228BP0C875 RAB9AP5-201ENST00000437794 597 ntBASIC3.87□□□□□ -1.79
FAM228BP0C875 RAB9AP2-201ENST00000443911 597 ntBASIC3.87□□□□□ -1.79
FAM228BP0C875 AL050338.1-201ENST00000445585 786 ntTSL 3 BASIC3.87□□□□□ -1.79
FAM228BP0C875 MRPS31P2-201ENST00000451581 518 ntBASIC3.87□□□□□ -1.79
FAM228BP0C875 NDUFA5P9-201ENST00000472609 340 ntBASIC3.87□□□□□ -1.79
FAM228BP0C875 AC026784.1-201ENST00000507986 352 ntBASIC3.87□□□□□ -1.79
FAM228BP0C875 MTCO1P35-201ENST00000515270 228 ntBASIC3.87□□□□□ -1.79
FAM228BP0C875 AC093853.1-201ENST00000515689 483 ntBASIC3.87□□□□□ -1.79
FAM228BP0C875 AC117834.1-202ENST00000521203 561 ntTSL 4 BASIC3.87□□□□□ -1.79
FAM228BP0C875 AC007991.1-201ENST00000522680 631 ntBASIC3.87□□□□□ -1.79
FAM228BP0C875 STX3-204ENST00000530221 534 ntTSL 5 BASIC3.87□□□□□ -1.79
FAM228BP0C875 SNHG1-205ENST00000537869 1038 ntTSL 3 BASIC3.87□□□□□ -1.79
FAM228BP0C875 AF230666.2-201ENST00000602328 725 ntBASIC3.87□□□□□ -1.79
FAM228BP0C875 CT45A9-201ENST00000604569 770 ntAPPRIS P1 TSL 1 (best) BASIC3.87□□□□□ -1.79
FAM228BP0C875 AC006077.1-201ENST00000604746 343 ntBASIC3.87□□□□□ -1.79
FAM228BP0C875 AC107031.1-201ENST00000604939 347 ntTSL 2 BASIC3.87□□□□□ -1.79
FAM228BP0C875 CT45A8-201ENST00000611438 770 ntAPPRIS P1 TSL 1 (best) BASIC3.87□□□□□ -1.79
FAM228BP0C875 CT45A10-202ENST00000617981 578 ntAPPRIS P1 TSL 1 (best) BASIC3.87□□□□□ -1.79
FAM228BP0C875 CT45A7-202ENST00000620885 578 ntAPPRIS P1 TSL 1 (best) BASIC3.87□□□□□ -1.79
FAM228BP0C875 ABCA5-208ENST00000588877 6525 ntAPPRIS P1 TSL 1 (best) BASIC3.87□□□□□ -1.79
FAM228BP0C875 PCLO-206ENST00000437081 3786 ntTSL 1 (best) BASIC3.87□□□□□ -1.79
FAM228BP0C875 PHKBP1-201ENST00000450951 1951 ntBASIC3.87□□□□□ -1.79
FAM228BP0C875 SYTL2-203ENST00000359152 4123 ntAPPRIS ALT1 TSL 1 (best) BASIC3.87□□□□□ -1.79
FAM228BP0C875 FAM114A2-210ENST00000520313 1394 ntTSL 2 BASIC3.87□□□□□ -1.79
FAM228BP0C875 LRFN5-204ENST00000554171 4253 ntAPPRIS ALT2 TSL 1 (best) BASIC3.87□□□□□ -1.79
FAM228BP0C875 ZBTB37-201ENST00000367701 19128 ntAPPRIS P1 TSL 1 (best) BASIC3.86□□□□□ -1.79
FAM228BP0C875 PRRG1-202ENST00000449135 4481 ntAPPRIS P1 TSL 1 (best) BASIC3.86□□□□□ -1.79
FAM228BP0C875 AC087521.2-201ENST00000499066 2190 ntTSL 2 BASIC3.86□□□□□ -1.79
FAM228BP0C875 WNK3-202ENST00000375159 5403 ntAPPRIS P3 TSL 1 (best) BASIC3.86□□□□□ -1.79
FAM228BP0C875 TNPO1P3-201ENST00000436471 2662 ntBASIC3.86□□□□□ -1.79
FAM228BP0C875 ATXN3-248ENST00000558190 26812 ntAPPRIS P1 TSL 1 (best) BASIC3.86□□□□□ -1.79
FAM228BP0C875 XIAPP3-201ENST00000312918 795 ntBASIC3.86□□□□□ -1.79
FAM228BP0C875 RNA5SP235-201ENST00000365411 114 ntBASIC3.86□□□□□ -1.79
FAM228BP0C875 MIR141-201ENST00000384975 95 ntBASIC3.86□□□□□ -1.79
FAM228BP0C875 LINC01048-201ENST00000414480 511 ntTSL 2 BASIC3.86□□□□□ -1.79
FAM228BP0C875 AC108681.1-202ENST00000417384 589 ntTSL 4 BASIC3.86□□□□□ -1.79
FAM228BP0C875 AC245054.1-201ENST00000420944 258 ntBASIC3.86□□□□□ -1.79
FAM228BP0C875 AL133162.1-201ENST00000463228 453 ntBASIC3.86□□□□□ -1.79
Retrieved 100 of 98,524 protein–RNA pairs in 82.1 ms