Protein–RNA interactions for Protein: P02649

APOE, Apolipoprotein E, humanhuman

Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOEP02649 MIR486-1-201ENST00000612171 68 ntBASIC4.05□□□□□ -1.76
APOEP02649 AL354798.1-201ENST00000622505 329 ntBASIC4.05□□□□□ -1.76
APOEP02649 AC073530.2-201ENST00000623987 261 ntBASIC4.05□□□□□ -1.76
APOEP02649 ORMDL1-201ENST00000325795 2692 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
APOEP02649 OSBPL8-202ENST00000393249 7047 ntAPPRIS ALT1 TSL 1 (best) BASIC4.05□□□□□ -1.76
APOEP02649 FAP-214ENST00000627638 2569 ntAPPRIS ALT1 TSL 5 BASIC4.05□□□□□ -1.76
APOEP02649 RNMT-203ENST00000543302 1849 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
APOEP02649 DGKH-201ENST00000261491 17261 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
APOEP02649 MGA-211ENST00000570161 11859 ntAPPRIS P4 TSL 5 BASIC4.04□□□□□ -1.76
APOEP02649 AL445189.1-201ENST00000405722 338 ntBASIC4.04□□□□□ -1.76
APOEP02649 RHEBP3-201ENST00000411920 351 ntBASIC4.04□□□□□ -1.76
APOEP02649 FRMPD3-AS1-201ENST00000415252 457 ntTSL 3 BASIC4.04□□□□□ -1.76
APOEP02649 AL583785.1-201ENST00000428006 512 ntTSL 2 BASIC4.04□□□□□ -1.76
APOEP02649 CYCSP53-201ENST00000455540 265 ntBASIC4.04□□□□□ -1.76
APOEP02649 AC083800.1-201ENST00000490594 246 ntAPPRIS P1 TSL 3 BASIC4.04□□□□□ -1.76
APOEP02649 RPL7P24-201ENST00000493052 752 ntBASIC4.04□□□□□ -1.76
APOEP02649 RN7SL323P-201ENST00000494712 295 ntBASIC4.04□□□□□ -1.76
APOEP02649 NPM1P41-201ENST00000512920 831 ntBASIC4.04□□□□□ -1.76
APOEP02649 SPINK13-203ENST00000512953 1022 ntAPPRIS P2 TSL 2 BASIC4.04□□□□□ -1.76
APOEP02649 MTND4LP31-201ENST00000514859 294 ntBASIC4.04□□□□□ -1.76
APOEP02649 CARD18-201ENST00000526823 627 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
APOEP02649 AC022081.1-201ENST00000537327 433 ntTSL 2 BASIC4.04□□□□□ -1.76
APOEP02649 MIR5685-201ENST00000579080 79 ntBASIC4.04□□□□□ -1.76
APOEP02649 SLC14A2-AS1-203ENST00000592286 528 ntTSL 4 BASIC4.04□□□□□ -1.76
APOEP02649 KLHL23-207ENST00000602521 630 ntTSL 3 BASIC4.04□□□□□ -1.76
APOEP02649 AL713922.2-201ENST00000619384 716 ntBASIC4.04□□□□□ -1.76
APOEP02649 OR4S2-202ENST00000641692 2211 ntAPPRIS P1 BASIC4.04□□□□□ -1.76
APOEP02649 SLC16A10-201ENST00000368850 10051 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
APOEP02649 AGTR2-201ENST00000371906 2882 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
APOEP02649 CLIC2-202ENST00000369449 2655 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
APOEP02649 SLC38A9-223ENST00000515629 2673 ntTSL 2 BASIC4.03□□□□□ -1.76
APOEP02649 NAMPT-202ENST00000354289 1213 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
APOEP02649 ANP32E-202ENST00000369115 708 ntTSL 3 BASIC4.03□□□□□ -1.76
APOEP02649 UBE2U-201ENST00000371076 1136 ntAPPRIS P2 TSL 1 (best) BASIC4.03□□□□□ -1.76
APOEP02649 TCEA1P4-201ENST00000415066 844 ntBASIC4.03□□□□□ -1.76
APOEP02649 ELOCP10-201ENST00000440624 327 ntBASIC4.03□□□□□ -1.76
APOEP02649 AL355601.1-201ENST00000444701 427 ntTSL 3 BASIC4.03□□□□□ -1.76
APOEP02649 GAPDHP36-201ENST00000480688 918 ntBASIC4.03□□□□□ -1.76
APOEP02649 AC112198.3-201ENST00000505950 441 ntTSL 3 BASIC4.03□□□□□ -1.76
APOEP02649 AC008572.1-201ENST00000507269 442 ntTSL 5 BASIC4.03□□□□□ -1.76
APOEP02649 LINC02272-202ENST00000511399 607 ntTSL 2 BASIC4.03□□□□□ -1.76
APOEP02649 AP003472.1-201ENST00000519844 644 ntTSL 3 BASIC4.03□□□□□ -1.76
APOEP02649 AC073172.2-201ENST00000527770 571 ntTSL 4 BASIC4.03□□□□□ -1.76
APOEP02649 NR1H4-204ENST00000546380 565 ntTSL 3 BASIC4.03□□□□□ -1.76
APOEP02649 LINC02463-201ENST00000546414 497 ntTSL 3 BASIC4.03□□□□□ -1.76
APOEP02649 AC106785.1-201ENST00000565935 262 ntBASIC4.03□□□□□ -1.76
APOEP02649 CHEK2P2-203ENST00000566448 670 ntTSL 5 BASIC4.03□□□□□ -1.76
APOEP02649 AC093227.2-201ENST00000589357 285 ntBASIC4.03□□□□□ -1.76
APOEP02649 ELOCP34-201ENST00000604436 327 ntBASIC4.03□□□□□ -1.76
APOEP02649 AL451086.1-201ENST00000605596 223 ntBASIC4.03□□□□□ -1.76
APOEP02649 Z98949.1-212ENST00000609820 837 ntTSL 5 BASIC4.03□□□□□ -1.76
APOEP02649 AL391261.4-201ENST00000616012 481 ntBASIC4.03□□□□□ -1.76
APOEP02649 PACRG-211ENST00000621363 360 ntTSL 5 BASIC4.03□□□□□ -1.76
APOEP02649 DYNAP-201ENST00000321600 2027 ntAPPRIS P3 TSL 2 BASIC4.03□□□□□ -1.76
APOEP02649 ENPP3-202ENST00000358229 3026 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
APOEP02649 AC006042.3-201ENST00000454684 1469 ntBASIC4.03□□□□□ -1.76
APOEP02649 ZNF99-202ENST00000596209 7817 ntTSL 5 BASIC4.03□□□□□ -1.76
APOEP02649 NR5A2-201ENST00000236914 3115 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
APOEP02649 TNFAIP6-201ENST00000243347 1424 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
APOEP02649 STEAP4-202ENST00000380079 9988 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
APOEP02649 TAX1BP1-213ENST00000543117 3365 ntAPPRIS ALT2 TSL 2 BASIC4.02□□□□□ -1.77
APOEP02649 ST7-221ENST00000465133 2155 ntTSL 5 BASIC4.02□□□□□ -1.77
APOEP02649 OR2AP1-201ENST00000321688 930 ntAPPRIS P1 BASIC4.02□□□□□ -1.77
APOEP02649 DNASE2B-202ENST00000370665 1269 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
APOEP02649 MIR199A2-201ENST00000385289 110 ntBASIC4.02□□□□□ -1.77
APOEP02649 SMC4P1-201ENST00000414479 527 ntBASIC4.02□□□□□ -1.77
APOEP02649 NPM1P34-201ENST00000428821 893 ntBASIC4.02□□□□□ -1.77
APOEP02649 HMGB3P5-201ENST00000428894 612 ntBASIC4.02□□□□□ -1.77
APOEP02649 AL365396.1-201ENST00000430854 671 ntBASIC4.02□□□□□ -1.77
APOEP02649 RPS26P40-201ENST00000435209 294 ntBASIC4.02□□□□□ -1.77
APOEP02649 USP9YP7-201ENST00000436723 430 ntBASIC4.02□□□□□ -1.77
APOEP02649 GPC6-AS2-201ENST00000445540 587 ntTSL 5 BASIC4.02□□□□□ -1.77
APOEP02649 AL500522.2-201ENST00000448562 343 ntBASIC4.02□□□□□ -1.77
APOEP02649 AC013460.1-205ENST00000450695 518 ntTSL 4 BASIC4.02□□□□□ -1.77
APOEP02649 USP9YP32-201ENST00000452432 430 ntBASIC4.02□□□□□ -1.77
APOEP02649 CLIC4P1-201ENST00000453177 535 ntBASIC4.02□□□□□ -1.77
APOEP02649 Z99916.1-201ENST00000454253 482 ntTSL 3 BASIC4.02□□□□□ -1.77
APOEP02649 HNRNPDLP3-201ENST00000456745 380 ntBASIC4.02□□□□□ -1.77
APOEP02649 AC114982.2-201ENST00000461396 358 ntBASIC4.02□□□□□ -1.77
APOEP02649 AL672167.3-201ENST00000465951 960 ntBASIC4.02□□□□□ -1.77
APOEP02649 FTH1P2-201ENST00000466086 412 ntBASIC4.02□□□□□ -1.77
APOEP02649 AC007537.2-201ENST00000472093 511 ntBASIC4.02□□□□□ -1.77
APOEP02649 AC091959.2-201ENST00000477363 321 ntBASIC4.02□□□□□ -1.77
APOEP02649 BTF3L4P4-201ENST00000506381 449 ntBASIC4.02□□□□□ -1.77
APOEP02649 PLAC8-205ENST00000509973 489 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
APOEP02649 NDUFB4P9-201ENST00000511646 388 ntBASIC4.02□□□□□ -1.77
APOEP02649 WWC2-AS1-201ENST00000511846 404 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
APOEP02649 AC093763.1-201ENST00000512464 699 ntTSL 3 BASIC4.02□□□□□ -1.77
APOEP02649 RNA5SP164-201ENST00000516533 110 ntBASIC4.02□□□□□ -1.77
APOEP02649 RNA5SP143-201ENST00000516936 115 ntBASIC4.02□□□□□ -1.77
APOEP02649 AC090993.1-201ENST00000522460 582 ntTSL 3 BASIC4.02□□□□□ -1.77
APOEP02649 AC091117.2-201ENST00000560324 542 ntTSL 4 BASIC4.02□□□□□ -1.77
APOEP02649 GS1-279B7.1-203ENST00000565520 609 ntTSL 5 BASIC4.02□□□□□ -1.77
APOEP02649 AL161912.3-201ENST00000605404 628 ntBASIC4.02□□□□□ -1.77
APOEP02649 LINC00397-202ENST00000606785 409 ntTSL 5 BASIC4.02□□□□□ -1.77
APOEP02649 AL356515.1-201ENST00000611081 415 ntTSL 3 BASIC4.02□□□□□ -1.77
APOEP02649 AC005344.1-201ENST00000613391 459 ntBASIC4.02□□□□□ -1.77
APOEP02649 AC099669.2-201ENST00000616549 437 ntBASIC4.02□□□□□ -1.77
APOEP02649 FP236240.3-201ENST00000623061 327 ntBASIC4.02□□□□□ -1.77
APOEP02649 AL158835.3-201ENST00000625908 565 ntTSL 5 BASIC4.02□□□□□ -1.77
Retrieved 100 of 98,524 protein–RNA pairs in 76.3 ms