Protein–RNA interactions for Protein: P02452

COL1A1, Collagen alpha-1(I) chain, humanhuman

Predicted RBP Predictions only

Length 1,464 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1P02452 AC006272.2-201ENST00000594725 163 ntBASIC4.39□□□□□ -1.71
COL1A1P02452 KLHL13-208ENST00000541812 3102 ntTSL 2 BASIC4.39□□□□□ -1.71
COL1A1P02452 UTP20-201ENST00000261637 9025 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
COL1A1P02452 CASC1-203ENST00000395987 2363 ntAPPRIS P3 TSL 1 (best) BASIC4.39□□□□□ -1.71
COL1A1P02452 PRLR-217ENST00000618457 11688 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
COL1A1P02452 ZMYM6-201ENST00000317538 2702 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
COL1A1P02452 ESRRG-202ENST00000360012 5431 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
COL1A1P02452 LBR-202ENST00000338179 3812 ntAPPRIS P1 TSL 5 BASIC4.39□□□□□ -1.71
COL1A1P02452 LPAR4-201ENST00000435339 2611 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
COL1A1P02452 RNU6-1279P-201ENST00000383917 103 ntBASIC4.38□□□□□ -1.71
COL1A1P02452 AC003035.1-201ENST00000391359 544 ntTSL 3 BASIC4.38□□□□□ -1.71
COL1A1P02452 AL391219.1-201ENST00000422570 483 ntBASIC4.38□□□□□ -1.71
COL1A1P02452 REREP1Y-201ENST00000422655 198 ntBASIC4.38□□□□□ -1.71
COL1A1P02452 OSTCP5-201ENST00000425293 453 ntBASIC4.38□□□□□ -1.71
COL1A1P02452 OR5AW1P-201ENST00000426334 1006 ntBASIC4.38□□□□□ -1.71
COL1A1P02452 HIGD1AP12-201ENST00000427832 281 ntBASIC4.38□□□□□ -1.71
COL1A1P02452 AL512625.3-204ENST00000438699 1031 ntTSL 5 BASIC4.38□□□□□ -1.71
COL1A1P02452 AF228730.2-201ENST00000438784 848 ntBASIC4.38□□□□□ -1.71
COL1A1P02452 REREP2Y-201ENST00000439103 200 ntBASIC4.38□□□□□ -1.71
COL1A1P02452 AL034349.1-201ENST00000458367 549 ntTSL 5 BASIC4.38□□□□□ -1.71
COL1A1P02452 RPL5P24-201ENST00000463742 885 ntBASIC4.38□□□□□ -1.71
COL1A1P02452 RN7SL807P-201ENST00000470923 297 ntBASIC4.38□□□□□ -1.71
COL1A1P02452 CXCL11-202ENST00000503860 767 ntAPPRIS P1 TSL 3 BASIC4.38□□□□□ -1.71
COL1A1P02452 AC105924.1-201ENST00000504057 339 ntTSL 3 BASIC4.38□□□□□ -1.71
COL1A1P02452 RN7SKP57-201ENST00000517248 293 ntBASIC4.38□□□□□ -1.71
COL1A1P02452 SUMO2P20-201ENST00000520803 283 ntBASIC4.38□□□□□ -1.71
COL1A1P02452 TRAV15-201ENST00000556680 249 ntBASIC4.38□□□□□ -1.71
COL1A1P02452 AC079880.2-201ENST00000603790 1213 ntBASIC4.38□□□□□ -1.71
COL1A1P02452 MIR8058-201ENST00000615737 89 ntBASIC4.38□□□□□ -1.71
COL1A1P02452 ABBA01000935.2-201ENST00000637477 838 ntBASIC4.38□□□□□ -1.71
COL1A1P02452 FOXP2-227ENST00000638397 240 ntTSL 5 BASIC4.38□□□□□ -1.71
COL1A1P02452 GYPE-201ENST00000358615 1684 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
COL1A1P02452 IQGAP2-202ENST00000379730 5442 ntTSL 5 BASIC4.38□□□□□ -1.71
COL1A1P02452 OR6P1-202ENST00000641540 3255 ntAPPRIS P1 BASIC4.38□□□□□ -1.71
COL1A1P02452 PDCD1LG2-201ENST00000397747 2365 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
COL1A1P02452 AC090510.1-202ENST00000500850 2017 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
COL1A1P02452 MPDZ-211ENST00000536827 6176 ntAPPRIS ALT2 TSL 1 (best) BASIC4.37□□□□□ -1.71
COL1A1P02452 PKN2-AS1-202ENST00000458097 3542 ntTSL 2 BASIC4.37□□□□□ -1.71
COL1A1P02452 G6PC2-203ENST00000421979 494 ntTSL 3 BASIC4.37□□□□□ -1.71
COL1A1P02452 SETP6-201ENST00000479329 568 ntBASIC4.37□□□□□ -1.71
COL1A1P02452 AC107021.1-202ENST00000480247 555 ntTSL 5 BASIC4.37□□□□□ -1.71
COL1A1P02452 AC012123.2-201ENST00000485809 248 ntBASIC4.37□□□□□ -1.71
COL1A1P02452 SPINK13-203ENST00000512953 1022 ntAPPRIS P2 TSL 2 BASIC4.37□□□□□ -1.71
COL1A1P02452 AC104619.2-201ENST00000514293 646 ntTSL 3 BASIC4.37□□□□□ -1.71
COL1A1P02452 AC090150.2-201ENST00000521869 815 ntTSL 3 BASIC4.37□□□□□ -1.71
COL1A1P02452 DEFB109F-202ENST00000542600 509 ntTSL 2 BASIC4.37□□□□□ -1.71
COL1A1P02452 TIMM9-206ENST00000555593 796 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
COL1A1P02452 LINC01470-205ENST00000584829 681 ntTSL 3 BASIC4.37□□□□□ -1.71
COL1A1P02452 OR1AB1P-201ENST00000585564 761 ntBASIC4.37□□□□□ -1.71
COL1A1P02452 CT45A3-201ENST00000597510 1076 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
COL1A1P02452 AC233280.2-201ENST00000603917 1070 ntBASIC4.37□□□□□ -1.71
COL1A1P02452 CT45A2-201ENST00000605791 1076 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
COL1A1P02452 AC097717.1-250ENST00000608498 273 ntTSL 5 BASIC4.37□□□□□ -1.71
COL1A1P02452 MIR7851-201ENST00000610611 160 ntBASIC4.37□□□□□ -1.71
COL1A1P02452 CT45A5-202ENST00000617203 726 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
COL1A1P02452 AL132656.3-201ENST00000606384 1595 ntBASIC4.37□□□□□ -1.71
COL1A1P02452 CRB1-201ENST00000367397 9023 ntTSL 2 BASIC4.37□□□□□ -1.71
COL1A1P02452 KIAA0825-203ENST00000513200 4942 ntTSL 5 BASIC4.37□□□□□ -1.71
COL1A1P02452 BRCA2-206ENST00000544455 10984 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
COL1A1P02452 LRP1B-201ENST00000389484 16535 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
COL1A1P02452 ZNF99-201ENST00000397104 3114 ntAPPRIS P1 TSL 5 BASIC4.37□□□□□ -1.71
COL1A1P02452 AC018555.1-201ENST00000567548 1980 ntBASIC4.37□□□□□ -1.71
COL1A1P02452 PLCB4-204ENST00000378501 5833 ntAPPRIS P4 TSL 5 BASIC4.37□□□□□ -1.71
COL1A1P02452 ADGRL2-201ENST00000319517 5479 ntAPPRIS P2 TSL 1 (best) BASIC4.37□□□□□ -1.71
COL1A1P02452 RNU4-35P-201ENST00000362588 141 ntBASIC4.37□□□□□ -1.71
COL1A1P02452 OR5V1-215ENST00000377154 1266 ntAPPRIS P1 BASIC4.37□□□□□ -1.71
COL1A1P02452 NACAP7-201ENST00000407371 609 ntBASIC4.37□□□□□ -1.71
COL1A1P02452 OR4K6P-201ENST00000416478 897 ntBASIC4.37□□□□□ -1.71
COL1A1P02452 DPPA2P2-201ENST00000418220 897 ntBASIC4.37□□□□□ -1.71
COL1A1P02452 AC098824.1-201ENST00000453565 980 ntBASIC4.37□□□□□ -1.71
COL1A1P02452 RN7SL809P-201ENST00000482040 297 ntBASIC4.37□□□□□ -1.71
COL1A1P02452 AP000563.1-201ENST00000490865 758 ntBASIC4.37□□□□□ -1.71
COL1A1P02452 LINC01957-201ENST00000506392 751 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
COL1A1P02452 AC105999.1-201ENST00000518722 473 ntTSL 3 BASIC4.37□□□□□ -1.71
COL1A1P02452 AP000442.2-202ENST00000531311 601 ntTSL 3 BASIC4.37□□□□□ -1.71
COL1A1P02452 CFL2-206ENST00000556161 546 ntTSL 4 BASIC4.37□□□□□ -1.71
COL1A1P02452 MIR4513-201ENST00000581077 86 ntBASIC4.37□□□□□ -1.71
COL1A1P02452 WDR7-OT1-201ENST00000592032 565 ntTSL 4 BASIC4.37□□□□□ -1.71
COL1A1P02452 TBC1D31-214ENST00000522420 3167 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
COL1A1P02452 AC009229.4-201ENST00000623854 1947 ntBASIC4.36□□□□□ -1.71
COL1A1P02452 ZNF280D-201ENST00000267807 4328 ntAPPRIS P3 TSL 1 (best) BASIC4.36□□□□□ -1.71
COL1A1P02452 SAGE2P-201ENST00000420011 2126 ntBASIC4.36□□□□□ -1.71
COL1A1P02452 FIGNL1-203ENST00000419119 3700 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
COL1A1P02452 MALRD1-204ENST00000454679 6880 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
COL1A1P02452 MTRNR2L10-201ENST00000545075 1530 ntAPPRIS P1 BASIC4.36□□□□□ -1.71
COL1A1P02452 AL590867.1-201ENST00000392385 1212 ntTSL 2 BASIC4.36□□□□□ -1.71
COL1A1P02452 AC073071.1-201ENST00000412410 388 ntTSL 3 BASIC4.36□□□□□ -1.71
COL1A1P02452 YWHAEP5-201ENST00000431545 765 ntBASIC4.36□□□□□ -1.71
COL1A1P02452 AC012594.1-271ENST00000438635 736 ntTSL 3 BASIC4.36□□□□□ -1.71
COL1A1P02452 AC068196.1-201ENST00000456895 833 ntTSL 3 BASIC4.36□□□□□ -1.71
COL1A1P02452 RPL6P9-201ENST00000466502 859 ntBASIC4.36□□□□□ -1.71
COL1A1P02452 AC083800.1-201ENST00000490594 246 ntAPPRIS P1 TSL 3 BASIC4.36□□□□□ -1.71
COL1A1P02452 AC069360.1-201ENST00000503469 431 ntTSL 2 BASIC4.36□□□□□ -1.71
COL1A1P02452 AC022784.3-202ENST00000517816 826 ntTSL 3 BASIC4.36□□□□□ -1.71
COL1A1P02452 AP002892.1-201ENST00000537727 550 ntTSL 4 BASIC4.36□□□□□ -1.71
COL1A1P02452 MIMT1-201ENST00000597105 1050 ntBASIC4.36□□□□□ -1.71
COL1A1P02452 AP003392.5-201ENST00000607857 415 ntBASIC4.36□□□□□ -1.71
COL1A1P02452 AC241377.1-201ENST00000619797 406 ntBASIC4.36□□□□□ -1.71
COL1A1P02452 AC073172.1-201ENST00000636967 851 ntTSL 5 BASIC4.36□□□□□ -1.71
COL1A1P02452 ADGRL3-216ENST00000514157 4789 ntTSL 5 BASIC4.36□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 107.2 ms