Protein–RNA interactions for Protein: O75150

RNF40, E3 ubiquitin-protein ligase BRE1B, humanhuman

Predictions only

Length 1,001 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40O75150 AC104563.1-201ENST00000476147 376 ntBASIC7.34□□□□□ -1.23
RNF40O75150 OR9A1P-202ENST00000484361 945 ntBASIC7.34□□□□□ -1.23
RNF40O75150 AC022415.1-202ENST00000486612 523 ntBASIC7.34□□□□□ -1.23
RNF40O75150 RN7SL649P-201ENST00000496974 275 ntBASIC7.34□□□□□ -1.23
RNF40O75150 AC025465.3-201ENST00000510570 311 ntBASIC7.34□□□□□ -1.23
RNF40O75150 AC005699.1-203ENST00000515286 688 ntTSL 3 BASIC7.34□□□□□ -1.23
RNF40O75150 RNU6-699P-201ENST00000517081 110 ntBASIC7.34□□□□□ -1.23
RNF40O75150 BAALC-AS1-208ENST00000523614 582 ntTSL 5 BASIC7.34□□□□□ -1.23
RNF40O75150 ST3GAL3-232ENST00000531451 420 ntTSL 1 (best) BASIC7.34□□□□□ -1.23
RNF40O75150 AC087318.1-201ENST00000536786 389 ntTSL 3 BASIC7.34□□□□□ -1.23
RNF40O75150 ASB8-207ENST00000536953 923 ntTSL 2 BASIC7.34□□□□□ -1.23
RNF40O75150 AC103740.1-202ENST00000558404 542 ntTSL 4 BASIC7.34□□□□□ -1.23
RNF40O75150 AC090751.1-201ENST00000566966 267 ntBASIC7.34□□□□□ -1.23
RNF40O75150 C18orf54-203ENST00000578138 776 ntTSL 3 BASIC7.34□□□□□ -1.23
RNF40O75150 MIR4312-201ENST00000579909 76 ntBASIC7.34□□□□□ -1.23
RNF40O75150 AP005119.1-201ENST00000580956 292 ntBASIC7.34□□□□□ -1.23
RNF40O75150 RN7SL667P-201ENST00000582817 298 ntBASIC7.34□□□□□ -1.23
RNF40O75150 AL354984.3-201ENST00000604803 325 ntBASIC7.34□□□□□ -1.23
RNF40O75150 AL008729.2-201ENST00000606393 473 ntBASIC7.34□□□□□ -1.23
RNF40O75150 AC009779.8-202ENST00000607990 932 ntBASIC7.34□□□□□ -1.23
RNF40O75150 Z82243.1-201ENST00000609432 473 ntBASIC7.34□□□□□ -1.23
RNF40O75150 AC015819.1-201ENST00000613588 663 ntBASIC7.34□□□□□ -1.23
RNF40O75150 AC015712.7-201ENST00000615211 635 ntBASIC7.34□□□□□ -1.23
RNF40O75150 EFCAB8-204ENST00000618684 435 ntTSL 5 BASIC7.34□□□□□ -1.23
RNF40O75150 AC008626.2-201ENST00000624425 248 ntBASIC7.34□□□□□ -1.23
RNF40O75150 AL512643.1-201ENST00000635735 524 ntBASIC7.34□□□□□ -1.23
RNF40O75150 AC007603.3-201ENST00000636915 979 ntBASIC7.34□□□□□ -1.23
RNF40O75150 ADA2-206ENST00000449907 4278 ntAPPRIS ALT2 TSL 2 BASIC7.34□□□□□ -1.23
RNF40O75150 OR51E2-203ENST00000641638 2626 ntAPPRIS P1 BASIC7.34□□□□□ -1.23
RNF40O75150 ZNF532-214ENST00000589288 5585 ntAPPRIS P1 TSL 5 BASIC7.34□□□□□ -1.23
RNF40O75150 MKI67P1-201ENST00000604297 1460 ntBASIC7.34□□□□□ -1.23
RNF40O75150 HMGCS2-204ENST00000544913 1925 ntTSL 2 BASIC7.34□□□□□ -1.23
RNF40O75150 CSNK1G3-210ENST00000521364 2580 ntAPPRIS ALT2 TSL 2 BASIC7.34□□□□□ -1.23
RNF40O75150 ENPP2-207ENST00000522167 1695 ntTSL 2 BASIC7.34□□□□□ -1.23
RNF40O75150 AC007012.2-201ENST00000623206 1676 ntBASIC7.34□□□□□ -1.23
RNF40O75150 XPO1-202ENST00000404992 4105 ntAPPRIS P1 TSL 2 BASIC7.34□□□□□ -1.23
RNF40O75150 AP000688.2-201ENST00000422473 2336 ntTSL 2 BASIC7.34□□□□□ -1.23
RNF40O75150 ARHGAP32-203ENST00000524655 8194 ntTSL 1 (best) BASIC7.34□□□□□ -1.23
RNF40O75150 OR4K13-202ENST00000641664 5980 ntAPPRIS P1 BASIC7.34□□□□□ -1.24
RNF40O75150 AP003486.1-201ENST00000525716 3994 ntBASIC7.34□□□□□ -1.24
RNF40O75150 IFIT2-201ENST00000371826 3489 ntAPPRIS P2 TSL 1 (best) BASIC7.33□□□□□ -1.24
RNF40O75150 UNC79-203ENST00000553484 9100 ntTSL 5 BASIC7.33□□□□□ -1.24
RNF40O75150 ZNF292-201ENST00000339907 8287 ntAPPRIS ALT1 TSL 5 BASIC7.33□□□□□ -1.24
RNF40O75150 RNF6P1-201ENST00000444889 1784 ntBASIC7.33□□□□□ -1.24
RNF40O75150 PUS3-203ENST00000530811 1792 ntAPPRIS P1 TSL 1 (best) BASIC7.33□□□□□ -1.24
RNF40O75150 SNX18P3-202ENST00000565670 1750 ntBASIC7.33□□□□□ -1.24
RNF40O75150 ERC2-214ENST00000612797 3831 ntAPPRIS P1 TSL 1 (best) BASIC7.33□□□□□ -1.24
RNF40O75150 ZNF254-206ENST00000611359 3982 ntTSL 3 BASIC7.33□□□□□ -1.24
RNF40O75150 MTCO1P7-201ENST00000419523 1542 ntBASIC7.33□□□□□ -1.24
RNF40O75150 GFPT1-202ENST00000361060 8632 ntAPPRIS P1 TSL 1 (best) BASIC7.33□□□□□ -1.24
RNF40O75150 LINC01537-201ENST00000450804 2450 ntTSL 1 (best) BASIC7.33□□□□□ -1.24
RNF40O75150 RNF32-203ENST00000392741 2260 ntTSL 1 (best) BASIC7.33□□□□□ -1.24
RNF40O75150 HIST1H2BA-201ENST00000274764 516 ntAPPRIS P1 BASIC7.33□□□□□ -1.24
RNF40O75150 TRBV21OR9-2-201ENST00000331828 367 ntAPPRIS P1 BASIC7.33□□□□□ -1.24
RNF40O75150 SNORD3E-201ENST00000362899 217 ntBASIC7.33□□□□□ -1.24
RNF40O75150 RNU6-774P-201ENST00000363238 107 ntBASIC7.33□□□□□ -1.24
RNF40O75150 RNU6-39P-201ENST00000384344 107 ntBASIC7.33□□□□□ -1.24
RNF40O75150 Y_RNA.562-201ENST00000384695 113 ntBASIC7.33□□□□□ -1.24
RNF40O75150 GGA1-205ENST00000405147 575 ntTSL 4 BASIC7.33□□□□□ -1.24
RNF40O75150 MIR1266-201ENST00000408125 84 ntBASIC7.33□□□□□ -1.24
RNF40O75150 RPL18AP14-201ENST00000417685 526 ntBASIC7.33□□□□□ -1.24
RNF40O75150 AL022396.1-201ENST00000427011 386 ntTSL 3 BASIC7.33□□□□□ -1.24
RNF40O75150 TXNDC12-AS1-201ENST00000428794 391 ntTSL 3 BASIC7.33□□□□□ -1.24
RNF40O75150 AC018804.1-201ENST00000430381 618 ntBASIC7.33□□□□□ -1.24
RNF40O75150 AC009518.3-201ENST00000438972 253 ntBASIC7.33□□□□□ -1.24
RNF40O75150 ITGA9-AS1-207ENST00000445429 532 ntTSL 5 BASIC7.33□□□□□ -1.24
RNF40O75150 AL445466.1-201ENST00000448432 357 ntBASIC7.33□□□□□ -1.24
RNF40O75150 AL118520.1-201ENST00000450770 291 ntBASIC7.33□□□□□ -1.24
RNF40O75150 GAPDHP53-201ENST00000458397 924 ntBASIC7.33□□□□□ -1.24
RNF40O75150 AC117462.1-201ENST00000461186 554 ntTSL 4 BASIC7.33□□□□□ -1.24
RNF40O75150 EPDR1-204ENST00000476620 555 ntTSL 4 BASIC7.33□□□□□ -1.24
RNF40O75150 RN7SL502P-201ENST00000481857 290 ntBASIC7.33□□□□□ -1.24
RNF40O75150 CREM-242ENST00000490511 469 ntTSL 2 BASIC7.33□□□□□ -1.24
RNF40O75150 RNU6-475P-201ENST00000516073 104 ntBASIC7.33□□□□□ -1.24
RNF40O75150 AC022868.1-201ENST00000517767 391 ntBASIC7.33□□□□□ -1.24
RNF40O75150 FAU-203ENST00000525297 355 ntTSL 5 BASIC7.33□□□□□ -1.24
RNF40O75150 AC044810.3-201ENST00000527565 589 ntTSL 3 BASIC7.33□□□□□ -1.24
RNF40O75150 AC087721.1-201ENST00000559959 476 ntTSL 5 BASIC7.33□□□□□ -1.24
RNF40O75150 AC145350.2-201ENST00000561541 821 ntTSL 5 BASIC7.33□□□□□ -1.24
RNF40O75150 MIR3146-201ENST00000580367 79 ntBASIC7.33□□□□□ -1.24
RNF40O75150 MIR4775-201ENST00000581168 75 ntBASIC7.33□□□□□ -1.24
RNF40O75150 AC024267.2-201ENST00000582737 417 ntBASIC7.33□□□□□ -1.24
RNF40O75150 BBIP1P1-201ENST00000602999 279 ntBASIC7.33□□□□□ -1.24
RNF40O75150 AL161420.1-201ENST00000619393 264 ntBASIC7.33□□□□□ -1.24
RNF40O75150 SLC8A1-AS1-239ENST00000631142 623 ntTSL 5 BASIC7.33□□□□□ -1.24
RNF40O75150 AC063952.1-204ENST00000635496 927 ntTSL 5 BASIC7.33□□□□□ -1.24
RNF40O75150 AL354702.2-202ENST00000641481 890 ntBASIC7.33□□□□□ -1.24
RNF40O75150 OR7G2-202ENST00000641081 3015 ntAPPRIS ALT2 BASIC7.33□□□□□ -1.24
RNF40O75150 RRN3-202ENST00000327307 2039 ntTSL 2 BASIC7.33□□□□□ -1.24
RNF40O75150 LINC00616-205ENST00000514600 2017 ntTSL 1 (best) BASIC7.33□□□□□ -1.24
RNF40O75150 SNX25-207ENST00000618785 3151 ntTSL 5 BASIC7.33□□□□□ -1.24
RNF40O75150 NXF2B-205ENST00000618881 3193 ntTSL 2 BASIC7.33□□□□□ -1.24
RNF40O75150 AC010615.1-201ENST00000594254 1764 ntBASIC7.33□□□□□ -1.24
RNF40O75150 TIMM21-201ENST00000169551 3095 ntAPPRIS P1 TSL 1 (best) BASIC7.33□□□□□ -1.24
RNF40O75150 PCDH11Y-204ENST00000400457 9039 ntAPPRIS P5 TSL 1 (best) BASIC7.33□□□□□ -1.24
RNF40O75150 FBXO3-213ENST00000534136 3217 ntTSL 5 BASIC7.33□□□□□ -1.24
RNF40O75150 PCAT5-201ENST00000626667 3550 ntTSL 1 (best) BASIC7.33□□□□□ -1.24
RNF40O75150 SELE-203ENST00000367775 3389 ntTSL 5 BASIC7.33□□□□□ -1.24
RNF40O75150 FOXP2-201ENST00000350908 2638 ntAPPRIS P2 TSL 1 (best) BASIC7.32□□□□□ -1.24
RNF40O75150 LINC02097-201ENST00000419257 2063 ntTSL 1 (best) BASIC7.32□□□□□ -1.24
Retrieved 100 of 98,524 protein–RNA pairs in 94.2 ms