Protein–RNA interactions for Protein: O60663

LMX1B, LIM homeobox transcription factor 1-beta, humanhuman

Predictions only

Length 402 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LMX1BO60663 AC006338.2-201ENST00000616864 791 ntBASIC4.13□□□□□ -1.75
LMX1BO60663 AC139769.3-201ENST00000618383 175 ntBASIC4.13□□□□□ -1.75
LMX1BO60663 AC005086.4-201ENST00000623065 213 ntBASIC4.13□□□□□ -1.75
LMX1BO60663 AC024023.1-201ENST00000624530 922 ntBASIC4.13□□□□□ -1.75
LMX1BO60663 VIPR1-AS1-223ENST00000627073 451 ntTSL 5 BASIC4.13□□□□□ -1.75
LMX1BO60663 OR2J3-201ENST00000377169 1325 ntAPPRIS P1 BASIC4.13□□□□□ -1.75
LMX1BO60663 AL355306.2-205ENST00000635395 1646 ntTSL 5 BASIC4.13□□□□□ -1.75
LMX1BO60663 RASSF6-204ENST00000395777 2735 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
LMX1BO60663 ACSL5-204ENST00000393081 3380 ntAPPRIS P1 TSL 5 BASIC4.13□□□□□ -1.75
LMX1BO60663 GPR85-201ENST00000297146 5079 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
LMX1BO60663 KIF23-206ENST00000558585 2296 ntTSL 2 BASIC4.12□□□□□ -1.75
LMX1BO60663 MGC32805-205ENST00000510972 1424 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
LMX1BO60663 GABRA3-201ENST00000370314 3712 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
LMX1BO60663 PLCE1-202ENST00000371380 12024 ntAPPRIS P3 TSL 1 (best) BASIC4.12□□□□□ -1.75
LMX1BO60663 OSBPL9P1-201ENST00000604744 1469 ntBASIC4.12□□□□□ -1.75
LMX1BO60663 DEPDC1-202ENST00000456315 5331 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
LMX1BO60663 TET2-202ENST00000305737 9233 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
LMX1BO60663 MFSD8-216ENST00000641147 4009 ntBASIC4.12□□□□□ -1.75
LMX1BO60663 PREPL-205ENST00000409411 4725 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
LMX1BO60663 IL21-201ENST00000264497 629 ntAPPRIS P3 TSL 1 (best) BASIC4.12□□□□□ -1.75
LMX1BO60663 RNA5SP191-201ENST00000362585 102 ntBASIC4.12□□□□□ -1.75
LMX1BO60663 BANF2-202ENST00000377805 444 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
LMX1BO60663 RNU6-157P-201ENST00000383957 107 ntBASIC4.12□□□□□ -1.75
LMX1BO60663 RNU6-413P-201ENST00000384115 107 ntBASIC4.12□□□□□ -1.75
LMX1BO60663 RNU5A-2P-201ENST00000384337 116 ntBASIC4.12□□□□□ -1.75
LMX1BO60663 RNU6-549P-201ENST00000384433 107 ntBASIC4.12□□□□□ -1.75
LMX1BO60663 RNA5SP332-201ENST00000391063 115 ntBASIC4.12□□□□□ -1.75
LMX1BO60663 U3.30-201ENST00000391308 210 ntBASIC4.12□□□□□ -1.75
LMX1BO60663 RPS27AP11-201ENST00000402798 447 ntBASIC4.12□□□□□ -1.75
LMX1BO60663 AL079342.2-201ENST00000403367 482 ntBASIC4.12□□□□□ -1.75
LMX1BO60663 LINC00364-201ENST00000415120 611 ntTSL 3 BASIC4.12□□□□□ -1.75
LMX1BO60663 LINC01198-201ENST00000416521 500 ntTSL 3 BASIC4.12□□□□□ -1.75
LMX1BO60663 AC100848.1-201ENST00000417298 637 ntTSL 3 BASIC4.12□□□□□ -1.75
LMX1BO60663 TRGV6-201ENST00000417928 299 ntBASIC4.12□□□□□ -1.75
LMX1BO60663 TIMM9P2-201ENST00000419324 266 ntBASIC4.12□□□□□ -1.75
LMX1BO60663 RPL7P53-201ENST00000421245 739 ntBASIC4.12□□□□□ -1.75
LMX1BO60663 AL096799.1-201ENST00000425900 381 ntTSL 2 BASIC4.12□□□□□ -1.75
LMX1BO60663 TAF1A-AS1-202ENST00000427540 750 ntTSL 2 BASIC4.12□□□□□ -1.75
LMX1BO60663 CNOT7P1-201ENST00000429006 852 ntBASIC4.12□□□□□ -1.75
LMX1BO60663 MIR4435-2HG-206ENST00000432818 572 ntTSL 5 BASIC4.12□□□□□ -1.75
LMX1BO60663 CCNB1IP1P2-201ENST00000432876 818 ntBASIC4.12□□□□□ -1.75
LMX1BO60663 AL359265.2-201ENST00000434367 631 ntBASIC4.12□□□□□ -1.75
LMX1BO60663 AC010105.1-201ENST00000437290 385 ntTSL 5 BASIC4.12□□□□□ -1.75
LMX1BO60663 AC093639.1-201ENST00000441026 473 ntTSL 2 BASIC4.12□□□□□ -1.75
LMX1BO60663 AL591848.2-201ENST00000442712 522 ntTSL 3 BASIC4.12□□□□□ -1.75
LMX1BO60663 AL592437.1-201ENST00000443781 492 ntBASIC4.12□□□□□ -1.75
LMX1BO60663 AC092685.1-201ENST00000447960 1243 ntBASIC4.12□□□□□ -1.75
LMX1BO60663 SLC25A18P1-201ENST00000449385 454 ntBASIC4.12□□□□□ -1.75
LMX1BO60663 AL354771.1-201ENST00000452178 602 ntTSL 5 BASIC4.12□□□□□ -1.75
LMX1BO60663 AC093422.2-201ENST00000452599 686 ntTSL 2 BASIC4.12□□□□□ -1.75
LMX1BO60663 LINC01768-201ENST00000453347 476 ntTSL 3 BASIC4.12□□□□□ -1.75
LMX1BO60663 AL035407.2-201ENST00000454090 378 ntBASIC4.12□□□□□ -1.75
LMX1BO60663 AL133477.1-201ENST00000457472 514 ntBASIC4.12□□□□□ -1.75
LMX1BO60663 RNU7-125P-201ENST00000458760 62 ntBASIC4.12□□□□□ -1.75
LMX1BO60663 AC010326.1-201ENST00000462726 602 ntBASIC4.12□□□□□ -1.75
LMX1BO60663 MTND4LP3-201ENST00000468320 276 ntBASIC4.12□□□□□ -1.75
LMX1BO60663 LINC02053-202ENST00000488262 940 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
LMX1BO60663 RN7SKP276-201ENST00000516242 268 ntBASIC4.12□□□□□ -1.75
LMX1BO60663 MTCO1P49-201ENST00000523429 802 ntBASIC4.12□□□□□ -1.75
LMX1BO60663 AL137804.1-201ENST00000528872 576 ntTSL 3 BASIC4.12□□□□□ -1.75
LMX1BO60663 ASB8-204ENST00000536071 568 ntTSL 4 BASIC4.12□□□□□ -1.75
LMX1BO60663 LINC02451-202ENST00000548764 579 ntTSL 4 BASIC4.12□□□□□ -1.75
LMX1BO60663 AC084824.1-201ENST00000550917 1005 ntBASIC4.12□□□□□ -1.75
LMX1BO60663 AL132712.2-201ENST00000556653 127 ntTSL 3 BASIC4.12□□□□□ -1.75
LMX1BO60663 AGBL1-AS1-203ENST00000566878 865 ntTSL 3 BASIC4.12□□□□□ -1.75
LMX1BO60663 AC087463.3-201ENST00000570105 415 ntTSL 3 BASIC4.12□□□□□ -1.75
LMX1BO60663 AC015912.2-201ENST00000571053 181 ntBASIC4.12□□□□□ -1.75
LMX1BO60663 MTCO1P40-201ENST00000574371 625 ntBASIC4.12□□□□□ -1.75
LMX1BO60663 AC020910.3-201ENST00000603701 874 ntBASIC4.12□□□□□ -1.75
LMX1BO60663 COX6CP4-201ENST00000605798 228 ntBASIC4.12□□□□□ -1.75
LMX1BO60663 OR2AS2P-201ENST00000606902 342 ntBASIC4.12□□□□□ -1.75
LMX1BO60663 AC135507.1-201ENST00000607214 561 ntBASIC4.12□□□□□ -1.75
LMX1BO60663 AC072039.2-201ENST00000608883 439 ntBASIC4.12□□□□□ -1.75
LMX1BO60663 AC007497.1-201ENST00000610421 561 ntBASIC4.12□□□□□ -1.75
LMX1BO60663 AL592148.2-201ENST00000612210 372 ntBASIC4.12□□□□□ -1.75
LMX1BO60663 AC026585.1-201ENST00000619582 524 ntBASIC4.12□□□□□ -1.75
LMX1BO60663 AC006840.1-201ENST00000623069 542 ntBASIC4.12□□□□□ -1.75
LMX1BO60663 SMG1P6-201ENST00000532337 2930 ntBASIC4.12□□□□□ -1.75
LMX1BO60663 EEF1A1P42-201ENST00000613436 1331 ntBASIC4.12□□□□□ -1.75
LMX1BO60663 INPP4B-215ENST00000509777 4334 ntTSL 5 BASIC4.12□□□□□ -1.75
LMX1BO60663 LINC00919-201ENST00000561513 1658 ntTSL 2 BASIC4.12□□□□□ -1.75
LMX1BO60663 AC004982.1-201ENST00000608770 1655 ntTSL 4 BASIC4.12□□□□□ -1.75
LMX1BO60663 C21orf91-201ENST00000284881 5433 ntAPPRIS P4 TSL 2 BASIC4.12□□□□□ -1.75
LMX1BO60663 IL1RL1-201ENST00000233954 2058 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
LMX1BO60663 RAG2-209ENST00000618712 2818 ntAPPRIS P1 TSL 4 BASIC4.12□□□□□ -1.75
LMX1BO60663 SGO1P1-201ENST00000603525 1447 ntBASIC4.12□□□□□ -1.75
LMX1BO60663 OR5B12-202ENST00000641921 1807 ntAPPRIS P1 BASIC4.11□□□□□ -1.75
LMX1BO60663 CTSS-201ENST00000368985 4107 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
LMX1BO60663 SNCA-213ENST00000618500 3022 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
LMX1BO60663 OR2AP1-202ENST00000641114 1548 ntAPPRIS P1 BASIC4.11□□□□□ -1.75
LMX1BO60663 MATR3-228ENST00000620916 3134 ntTSL 5 BASIC4.11□□□□□ -1.75
LMX1BO60663 ELL2P3-201ENST00000457883 1602 ntBASIC4.11□□□□□ -1.75
LMX1BO60663 SLAIN1-201ENST00000267219 2090 ntAPPRIS ALT2 TSL 1 (best) BASIC4.11□□□□□ -1.75
LMX1BO60663 SCN1A-220ENST00000641603 12506 ntBASIC4.11□□□□□ -1.75
LMX1BO60663 MTND5P23-201ENST00000430812 1655 ntBASIC4.11□□□□□ -1.75
LMX1BO60663 AC245100.2-201ENST00000454544 1679 ntBASIC4.11□□□□□ -1.75
LMX1BO60663 AC126755.2-208ENST00000327792 462 ntBASIC4.11□□□□□ -1.75
LMX1BO60663 AC138969.1-213ENST00000331436 462 ntBASIC4.11□□□□□ -1.75
LMX1BO60663 OR5K4-201ENST00000354924 966 ntAPPRIS P1 BASIC4.11□□□□□ -1.75
LMX1BO60663 Y_RNA.51-201ENST00000362725 102 ntBASIC4.11□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 101.3 ms