Protein–RNA interactions for Protein: E9PL57

NEDD8-MDP1, NEDD8-MDP1 readthrough (Fragment), humanhuman

Predictions only

Length 170 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-MDP1E9PL57 AL354754.1-201ENST00000449730 625 ntTSL 3 BASIC4.2□□□□□ -1.74
NEDD8-MDP1E9PL57 AL353148.1-203ENST00000452286 665 ntTSL 3 BASIC4.2□□□□□ -1.74
NEDD8-MDP1E9PL57 RPL36AP13-201ENST00000457490 317 ntBASIC4.2□□□□□ -1.74
NEDD8-MDP1E9PL57 AC146944.2-203ENST00000502493 354 ntBASIC4.2□□□□□ -1.74
NEDD8-MDP1E9PL57 AC090673.1-204ENST00000504038 977 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
NEDD8-MDP1E9PL57 AC008572.1-201ENST00000507269 442 ntTSL 5 BASIC4.2□□□□□ -1.74
NEDD8-MDP1E9PL57 AC020593.1-201ENST00000507399 299 ntBASIC4.2□□□□□ -1.74
NEDD8-MDP1E9PL57 AC008957.1-201ENST00000510740 478 ntTSL 3 BASIC4.2□□□□□ -1.74
NEDD8-MDP1E9PL57 SAP18P1-201ENST00000512058 390 ntBASIC4.2□□□□□ -1.74
NEDD8-MDP1E9PL57 AC139495.1-202ENST00000513164 354 ntBASIC4.2□□□□□ -1.74
NEDD8-MDP1E9PL57 AC133963.2-201ENST00000513686 578 ntBASIC4.2□□□□□ -1.74
NEDD8-MDP1E9PL57 HMGN1P15-201ENST00000513870 295 ntBASIC4.2□□□□□ -1.74
NEDD8-MDP1E9PL57 snoU109.6-201ENST00000516831 118 ntBASIC4.2□□□□□ -1.74
NEDD8-MDP1E9PL57 RNU1-45P-201ENST00000517191 141 ntBASIC4.2□□□□□ -1.74
NEDD8-MDP1E9PL57 AC073172.2-201ENST00000527770 571 ntTSL 4 BASIC4.2□□□□□ -1.74
NEDD8-MDP1E9PL57 AC073525.1-202ENST00000550049 732 ntTSL 3 BASIC4.2□□□□□ -1.74
NEDD8-MDP1E9PL57 LINC02386-202ENST00000551287 564 ntTSL 4 BASIC4.2□□□□□ -1.74
NEDD8-MDP1E9PL57 AC087897.2-201ENST00000552639 678 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
NEDD8-MDP1E9PL57 BLOC1S6-207ENST00000565216 573 ntTSL 3 BASIC4.2□□□□□ -1.74
NEDD8-MDP1E9PL57 CHEK2P2-203ENST00000566448 670 ntTSL 5 BASIC4.2□□□□□ -1.74
NEDD8-MDP1E9PL57 AC022166.1-201ENST00000567851 581 ntTSL 5 BASIC4.2□□□□□ -1.74
NEDD8-MDP1E9PL57 AC092138.1-201ENST00000568659 472 ntTSL 2 BASIC4.2□□□□□ -1.74
NEDD8-MDP1E9PL57 RPL23AP87-202ENST00000573039 466 ntBASIC4.2□□□□□ -1.74
NEDD8-MDP1E9PL57 AC006130.2-201ENST00000586202 326 ntBASIC4.2□□□□□ -1.74
NEDD8-MDP1E9PL57 AC015911.5-201ENST00000587076 451 ntBASIC4.2□□□□□ -1.74
NEDD8-MDP1E9PL57 AC115522.1-201ENST00000595680 556 ntTSL 4 BASIC4.2□□□□□ -1.74
NEDD8-MDP1E9PL57 AL451044.1-201ENST00000604867 238 ntBASIC4.2□□□□□ -1.74
NEDD8-MDP1E9PL57 BNIP3P19-201ENST00000605397 577 ntBASIC4.2□□□□□ -1.74
NEDD8-MDP1E9PL57 AC016542.1-201ENST00000608259 493 ntBASIC4.2□□□□□ -1.74
NEDD8-MDP1E9PL57 SMCR2_2.1-201ENST00000619783 161 ntBASIC4.2□□□□□ -1.74
NEDD8-MDP1E9PL57 AC245452.5-201ENST00000620649 780 ntTSL 3 BASIC4.2□□□□□ -1.74
NEDD8-MDP1E9PL57 AL356863.1-201ENST00000623378 1080 ntBASIC4.2□□□□□ -1.74
NEDD8-MDP1E9PL57 AL138960.2-201ENST00000625145 535 ntBASIC4.2□□□□□ -1.74
NEDD8-MDP1E9PL57 ENPP2-202ENST00000259486 3233 ntAPPRIS P3 TSL 1 (best) BASIC4.2□□□□□ -1.74
NEDD8-MDP1E9PL57 STXBP4-201ENST00000376352 15590 ntAPPRIS P1 TSL 2 BASIC4.2□□□□□ -1.74
NEDD8-MDP1E9PL57 RC3H2-203ENST00000373670 9248 ntAPPRIS P1 TSL 5 BASIC4.2□□□□□ -1.74
NEDD8-MDP1E9PL57 AL122126.1-201ENST00000546905 1318 ntBASIC4.2□□□□□ -1.74
NEDD8-MDP1E9PL57 MS4A1-201ENST00000345732 3331 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
NEDD8-MDP1E9PL57 CENPF-201ENST00000366955 10307 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
NEDD8-MDP1E9PL57 OR6C2-203ENST00000641516 1682 ntAPPRIS P1 BASIC4.19□□□□□ -1.74
NEDD8-MDP1E9PL57 MCF2-201ENST00000338585 2826 ntAPPRIS ALT2 TSL 1 (best) BASIC4.19□□□□□ -1.74
NEDD8-MDP1E9PL57 MARCH1-201ENST00000274056 5367 ntAPPRIS P1 TSL 4 BASIC4.19□□□□□ -1.74
NEDD8-MDP1E9PL57 MAPK10-353ENST00000641803 8483 ntAPPRIS P2 BASIC4.19□□□□□ -1.74
NEDD8-MDP1E9PL57 AC012020.1-201ENST00000624541 1728 ntBASIC4.19□□□□□ -1.74
NEDD8-MDP1E9PL57 SNORD35B-201ENST00000363660 87 ntBASIC4.19□□□□□ -1.74
NEDD8-MDP1E9PL57 CD84-205ENST00000368051 965 ntAPPRIS ALT2 TSL 1 (best) BASIC4.19□□□□□ -1.74
NEDD8-MDP1E9PL57 AL359837.1-201ENST00000381357 287 ntBASIC4.19□□□□□ -1.74
NEDD8-MDP1E9PL57 RNU6-185P-201ENST00000384421 107 ntBASIC4.19□□□□□ -1.74
NEDD8-MDP1E9PL57 RNU6-1005P-201ENST00000384519 107 ntBASIC4.19□□□□□ -1.74
NEDD8-MDP1E9PL57 SNORA48.7-201ENST00000391302 135 ntBASIC4.19□□□□□ -1.74
NEDD8-MDP1E9PL57 PDC-201ENST00000391997 1242 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
NEDD8-MDP1E9PL57 ARL4A-204ENST00000396664 1144 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
NEDD8-MDP1E9PL57 LIPN-201ENST00000404459 1197 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
NEDD8-MDP1E9PL57 RNA5SP498-201ENST00000411342 120 ntBASIC4.19□□□□□ -1.74
NEDD8-MDP1E9PL57 CYCSP19-201ENST00000411715 316 ntBASIC4.19□□□□□ -1.74
NEDD8-MDP1E9PL57 TATDN1P1-201ENST00000414123 891 ntBASIC4.19□□□□□ -1.74
NEDD8-MDP1E9PL57 AC104389.1-201ENST00000418080 522 ntTSL 3 BASIC4.19□□□□□ -1.74
NEDD8-MDP1E9PL57 AL590609.2-201ENST00000421430 368 ntBASIC4.19□□□□□ -1.74
NEDD8-MDP1E9PL57 VN1R42P-201ENST00000424651 344 ntBASIC4.19□□□□□ -1.74
NEDD8-MDP1E9PL57 AC012497.1-201ENST00000429392 575 ntBASIC4.19□□□□□ -1.74
NEDD8-MDP1E9PL57 AL080316.1-201ENST00000432438 499 ntTSL 2 BASIC4.19□□□□□ -1.74
NEDD8-MDP1E9PL57 RPL23AP89-201ENST00000439324 255 ntBASIC4.19□□□□□ -1.74
NEDD8-MDP1E9PL57 RPL34P26-201ENST00000445636 354 ntBASIC4.19□□□□□ -1.74
NEDD8-MDP1E9PL57 AL121970.1-201ENST00000447557 929 ntTSL 1 (best) BASIC4.19□□□□□ -1.74
NEDD8-MDP1E9PL57 AL162388.1-201ENST00000450912 352 ntBASIC4.19□□□□□ -1.74
NEDD8-MDP1E9PL57 HMGB1P26-201ENST00000452520 628 ntBASIC4.19□□□□□ -1.74
NEDD8-MDP1E9PL57 SNORA84-201ENST00000459229 133 ntBASIC4.19□□□□□ -1.74
NEDD8-MDP1E9PL57 AC079804.1-201ENST00000461922 436 ntBASIC4.19□□□□□ -1.74
NEDD8-MDP1E9PL57 RPL23AP2-201ENST00000471227 466 ntBASIC4.19□□□□□ -1.74
NEDD8-MDP1E9PL57 FAM104B-204ENST00000472571 1109 ntAPPRIS ALT2 TSL 1 (best) BASIC4.19□□□□□ -1.74
NEDD8-MDP1E9PL57 AC091959.2-201ENST00000477363 321 ntBASIC4.19□□□□□ -1.74
NEDD8-MDP1E9PL57 LINC01017-201ENST00000508823 768 ntTSL 3 BASIC4.19□□□□□ -1.74
NEDD8-MDP1E9PL57 KRT19P6-201ENST00000510983 209 ntBASIC4.19□□□□□ -1.74
NEDD8-MDP1E9PL57 AC006063.1-201ENST00000512511 560 ntTSL 4 BASIC4.19□□□□□ -1.74
NEDD8-MDP1E9PL57 NPM1P41-201ENST00000512920 831 ntBASIC4.19□□□□□ -1.74
NEDD8-MDP1E9PL57 SNORA31.13-201ENST00000516624 135 ntBASIC4.19□□□□□ -1.74
NEDD8-MDP1E9PL57 IFITM8P-201ENST00000522529 394 ntBASIC4.19□□□□□ -1.74
NEDD8-MDP1E9PL57 MTCO1P49-201ENST00000523429 802 ntBASIC4.19□□□□□ -1.74
NEDD8-MDP1E9PL57 AC100770.1-201ENST00000532310 322 ntBASIC4.19□□□□□ -1.74
NEDD8-MDP1E9PL57 AC136475.4-201ENST00000534271 280 ntTSL 5 BASIC4.19□□□□□ -1.74
NEDD8-MDP1E9PL57 AC046130.2-201ENST00000537655 794 ntTSL 3 BASIC4.19□□□□□ -1.74
NEDD8-MDP1E9PL57 AC078909.1-201ENST00000559509 464 ntTSL 2 BASIC4.19□□□□□ -1.74
NEDD8-MDP1E9PL57 LINC01584-202ENST00000563990 852 ntTSL 3 BASIC4.19□□□□□ -1.74
NEDD8-MDP1E9PL57 AC025627.2-201ENST00000576220 160 ntBASIC4.19□□□□□ -1.74
NEDD8-MDP1E9PL57 AC090312.1-201ENST00000580637 348 ntBASIC4.19□□□□□ -1.74
NEDD8-MDP1E9PL57 GALP-203ENST00000590002 150 ntTSL 1 (best) BASIC4.19□□□□□ -1.74
NEDD8-MDP1E9PL57 AL008729.1-201ENST00000606627 553 ntTSL 4 BASIC4.19□□□□□ -1.74
NEDD8-MDP1E9PL57 AL590426.2-201ENST00000607287 786 ntTSL 3 BASIC4.19□□□□□ -1.74
NEDD8-MDP1E9PL57 AC110792.4-201ENST00000609843 298 ntBASIC4.19□□□□□ -1.74
NEDD8-MDP1E9PL57 AL133445.2-201ENST00000611191 527 ntBASIC4.19□□□□□ -1.74
NEDD8-MDP1E9PL57 AL034549.1-201ENST00000615120 578 ntTSL 2 BASIC4.19□□□□□ -1.74
NEDD8-MDP1E9PL57 AC090246.1-201ENST00000616499 426 ntBASIC4.19□□□□□ -1.74
NEDD8-MDP1E9PL57 AC006249.1-201ENST00000621223 471 ntBASIC4.19□□□□□ -1.74
NEDD8-MDP1E9PL57 AC034229.5-201ENST00000624258 185 ntBASIC4.19□□□□□ -1.74
NEDD8-MDP1E9PL57 METTL8-218ENST00000638989 876 ntTSL 5 BASIC4.19□□□□□ -1.74
NEDD8-MDP1E9PL57 ZNF43-207ENST00000595461 3399 ntAPPRIS ALT2 TSL 1 (best) BASIC4.19□□□□□ -1.74
NEDD8-MDP1E9PL57 ZNF808-201ENST00000359798 3600 ntAPPRIS P1 TSL 5 BASIC4.19□□□□□ -1.74
NEDD8-MDP1E9PL57 ERCC6-202ENST00000374127 1782 ntBASIC4.19□□□□□ -1.74
NEDD8-MDP1E9PL57 ADAM29-201ENST00000359240 3325 ntAPPRIS P1 TSL 2 BASIC4.19□□□□□ -1.74
NEDD8-MDP1E9PL57 MTCO1P4-201ENST00000520516 1409 ntBASIC4.19□□□□□ -1.74
Retrieved 100 of 98,524 protein–RNA pairs in 90.9 ms