Protein–RNA interactions for Protein: Q9Z0D9

Cx3cr1, CX3C chemokine receptor 1, mousemouse

Predictions only

Length 354 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cx3cr1Q9Z0D9 Trip6-201ENSMUST00000024119 2168 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Cx3cr1Q9Z0D9 AC115863.1-201ENSMUST00000214815 1813 ntBASIC14.06□□□□□ -0.16
Cx3cr1Q9Z0D9 Trabd-206ENSMUST00000169891 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Cx3cr1Q9Z0D9 Col2a1-201ENSMUST00000023123 5104 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Cx3cr1Q9Z0D9 Sirt6-201ENSMUST00000042923 1891 ntAPPRIS P3 TSL 1 (best) BASIC14.06□□□□□ -0.16
Cx3cr1Q9Z0D9 Rabl6-201ENSMUST00000058137 3230 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Cx3cr1Q9Z0D9 Tmem150b-202ENSMUST00000086364 2822 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Cx3cr1Q9Z0D9 Ptch1-201ENSMUST00000021921 7725 ntAPPRIS P2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Cx3cr1Q9Z0D9 Prmt1-203ENSMUST00000207370 2147 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Cx3cr1Q9Z0D9 Arhgef12-202ENSMUST00000165665 10752 ntAPPRIS P2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Cx3cr1Q9Z0D9 Kif17-204ENSMUST00000105821 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Cx3cr1Q9Z0D9 Epor-201ENSMUST00000006397 1761 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Cx3cr1Q9Z0D9 1110065P20Rik-203ENSMUST00000137769 659 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Cx3cr1Q9Z0D9 Gm24841-201ENSMUST00000158676 357 ntBASIC14.05□□□□□ -0.16
Cx3cr1Q9Z0D9 Gm42569-201ENSMUST00000200539 472 ntBASIC14.05□□□□□ -0.16
Cx3cr1Q9Z0D9 Gm18025-201ENSMUST00000221733 862 ntBASIC14.05□□□□□ -0.16
Cx3cr1Q9Z0D9 Tmem192-201ENSMUST00000026595 1122 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Cx3cr1Q9Z0D9 Cdkn2a-201ENSMUST00000060501 852 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Cx3cr1Q9Z0D9 Bri3bp-201ENSMUST00000049040 6473 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Cx3cr1Q9Z0D9 Cux1-212ENSMUST00000176778 5520 ntAPPRIS ALT2 TSL 5 BASIC14.05□□□□□ -0.16
Cx3cr1Q9Z0D9 Gm21596-201ENSMUST00000178049 1316 ntBASIC14.05□□□□□ -0.16
Cx3cr1Q9Z0D9 Wipf3-204ENSMUST00000132855 4516 ntAPPRIS P4 TSL 5 BASIC14.05□□□□□ -0.16
Cx3cr1Q9Z0D9 Nfe2-208ENSMUST00000149111 1878 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Cx3cr1Q9Z0D9 Rtp2-201ENSMUST00000061030 2421 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Cx3cr1Q9Z0D9 Kctd6-202ENSMUST00000170111 3052 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Cx3cr1Q9Z0D9 Xrcc1-205ENSMUST00000205573 2528 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Cx3cr1Q9Z0D9 Chrm3-202ENSMUST00000187510 4336 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Cx3cr1Q9Z0D9 1700034J05Rik-202ENSMUST00000111622 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Cx3cr1Q9Z0D9 Slc1a6-201ENSMUST00000005490 2029 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Cx3cr1Q9Z0D9 Ubp1-202ENSMUST00000084885 3850 ntAPPRIS P4 TSL 5 BASIC14.05□□□□□ -0.16
Cx3cr1Q9Z0D9 Mmp28-204ENSMUST00000119346 1517 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Cx3cr1Q9Z0D9 Dcdc2c-206ENSMUST00000221349 2209 ntAPPRIS P1 TSL 5 BASIC14.05□□□□□ -0.16
Cx3cr1Q9Z0D9 Krt6b-201ENSMUST00000023786 2226 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Cx3cr1Q9Z0D9 Tnfrsf25-201ENSMUST00000025706 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Cx3cr1Q9Z0D9 Patz1-205ENSMUST00000110043 3702 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
Cx3cr1Q9Z0D9 Cgn-204ENSMUST00000155485 2361 ntTSL 2 BASIC14.04□□□□□ -0.16
Cx3cr1Q9Z0D9 Otp-201ENSMUST00000022195 2656 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Cx3cr1Q9Z0D9 Nr3c2-204ENSMUST00000109913 5916 ntAPPRIS P2 TSL 5 BASIC14.04□□□□□ -0.16
Cx3cr1Q9Z0D9 Akp-ps1-202ENSMUST00000212812 1959 ntTSL 5 BASIC14.04□□□□□ -0.16
Cx3cr1Q9Z0D9 Tmem117-201ENSMUST00000080141 2781 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Cx3cr1Q9Z0D9 Gm8189-202ENSMUST00000211035 2039 ntTSL 5 BASIC14.04□□□□□ -0.16
Cx3cr1Q9Z0D9 Cstf2-201ENSMUST00000033609 4502 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Cx3cr1Q9Z0D9 Sdr39u1-201ENSMUST00000111325 1255 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Cx3cr1Q9Z0D9 Gm17661-201ENSMUST00000170317 270 ntBASIC14.04□□□□□ -0.16
Cx3cr1Q9Z0D9 E030044B06Rik-201ENSMUST00000181195 1266 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Cx3cr1Q9Z0D9 Gm26571-201ENSMUST00000181399 666 ntBASIC14.04□□□□□ -0.16
Cx3cr1Q9Z0D9 Krtcap3-205ENSMUST00000201625 902 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
Cx3cr1Q9Z0D9 Mrc2-202ENSMUST00000100335 5795 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Cx3cr1Q9Z0D9 Taf10-203ENSMUST00000141116 4281 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Cx3cr1Q9Z0D9 Btaf1-201ENSMUST00000099494 7204 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Cx3cr1Q9Z0D9 Fbxl3-206ENSMUST00000145693 3352 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Cx3cr1Q9Z0D9 Gm9917-202ENSMUST00000181099 1499 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Cx3cr1Q9Z0D9 Casp3-201ENSMUST00000093517 1520 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Cx3cr1Q9Z0D9 Cblb-201ENSMUST00000114471 6648 ntAPPRIS P2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Cx3cr1Q9Z0D9 Hsf4-202ENSMUST00000163734 1630 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Cx3cr1Q9Z0D9 Prss53-202ENSMUST00000205300 1662 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Cx3cr1Q9Z0D9 B4galt3-205ENSMUST00000126699 1758 ntTSL 5 BASIC14.04□□□□□ -0.16
Cx3cr1Q9Z0D9 Bend6-204ENSMUST00000129464 1750 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Cx3cr1Q9Z0D9 Papd4-201ENSMUST00000048702 2990 ntAPPRIS P2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Cx3cr1Q9Z0D9 Kat2a-202ENSMUST00000103118 3046 ntAPPRIS P4 TSL 1 (best) BASIC14.04□□□□□ -0.16
Cx3cr1Q9Z0D9 Arhgef10l-203ENSMUST00000097820 4382 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Cx3cr1Q9Z0D9 Pcsk6-201ENSMUST00000055576 4405 ntAPPRIS P3 TSL 5 BASIC14.04□□□□□ -0.16
Cx3cr1Q9Z0D9 App-201ENSMUST00000005406 3176 ntAPPRIS P2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Cx3cr1Q9Z0D9 Tuba8-201ENSMUST00000032233 2263 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Cx3cr1Q9Z0D9 Men1-205ENSMUST00000113501 2508 ntTSL 5 BASIC14.03□□□□□ -0.16
Cx3cr1Q9Z0D9 Pde8b-201ENSMUST00000022192 2517 ntAPPRIS ALT2 TSL 5 BASIC14.03□□□□□ -0.16
Cx3cr1Q9Z0D9 Rgl3-201ENSMUST00000045726 2543 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Cx3cr1Q9Z0D9 Atg4d-201ENSMUST00000065005 5951 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Cx3cr1Q9Z0D9 Arntl-203ENSMUST00000210074 2554 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Cx3cr1Q9Z0D9 Prss16-204ENSMUST00000150547 1159 ntTSL 3 BASIC14.03□□□□□ -0.16
Cx3cr1Q9Z0D9 Mrps10-201ENSMUST00000060752 1109 ntTSL 5 BASIC14.03□□□□□ -0.16
Cx3cr1Q9Z0D9 BC107364-201ENSMUST00000093126 1159 ntAPPRIS P4 TSL 1 (best) BASIC14.03□□□□□ -0.16
Cx3cr1Q9Z0D9 Ubxn1-201ENSMUST00000096255 1041 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Cx3cr1Q9Z0D9 BC107364-202ENSMUST00000098841 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Cx3cr1Q9Z0D9 Htatip2-202ENSMUST00000207895 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Cx3cr1Q9Z0D9 Casp8ap2-201ENSMUST00000029950 6799 ntAPPRIS P2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Cx3cr1Q9Z0D9 Tex264-203ENSMUST00000169068 1364 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Cx3cr1Q9Z0D9 Rprm-201ENSMUST00000100089 1460 ntAPPRIS P1 BASIC14.03□□□□□ -0.16
Cx3cr1Q9Z0D9 Krt13-201ENSMUST00000007275 1654 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Cx3cr1Q9Z0D9 Krt15-201ENSMUST00000107411 1700 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Cx3cr1Q9Z0D9 Mrpl49-201ENSMUST00000007482 1722 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Cx3cr1Q9Z0D9 Hdhd2-202ENSMUST00000097521 1716 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Cx3cr1Q9Z0D9 Nkx2-1-201ENSMUST00000001536 2809 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Cx3cr1Q9Z0D9 Lactbl1-201ENSMUST00000178843 2954 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
Cx3cr1Q9Z0D9 Mios-201ENSMUST00000040017 3710 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Cx3cr1Q9Z0D9 Gnb1-202ENSMUST00000105616 3088 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Cx3cr1Q9Z0D9 Mta1-203ENSMUST00000109723 2790 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.16
Cx3cr1Q9Z0D9 Mta1-204ENSMUST00000109726 2775 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.16
Cx3cr1Q9Z0D9 Mta1-205ENSMUST00000109727 2789 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.16
Cx3cr1Q9Z0D9 Csnk1e-201ENSMUST00000117786 2694 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Cx3cr1Q9Z0D9 Wac-215ENSMUST00000171042 2205 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
Cx3cr1Q9Z0D9 Lrrfip1-212ENSMUST00000189617 2155 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.16
Cx3cr1Q9Z0D9 Cyp46a1-201ENSMUST00000021684 2118 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Cx3cr1Q9Z0D9 Vmn1r17-204ENSMUST00000228294 2084 ntAPPRIS ALT2 BASIC14.02□□□□□ -0.16
Cx3cr1Q9Z0D9 Tuba1c-201ENSMUST00000058914 1977 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Cx3cr1Q9Z0D9 Carmn-201ENSMUST00000181155 1778 ntTSL 2 BASIC14.02□□□□□ -0.16
Cx3cr1Q9Z0D9 Atp5c1-202ENSMUST00000114896 1735 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
Cx3cr1Q9Z0D9 BC024978-204ENSMUST00000179391 1748 ntAPPRIS P3 TSL 5 BASIC14.02□□□□□ -0.16
Cx3cr1Q9Z0D9 Klhdc8b-214ENSMUST00000195435 1612 ntTSL 5 BASIC14.02□□□□□ -0.16
Cx3cr1Q9Z0D9 Mrps23-203ENSMUST00000118784 1404 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
Retrieved 100 of 76,532 protein–RNA pairs in 24.9 ms