Protein–RNA interactions for Protein: Q9R0X5

Rpgr, X-linked retinitis pigmentosa GTPase regulator, mousemouse

Predictions only

Length 1,001 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RpgrQ9R0X5 Chst8-204ENSMUST00000205259 1980 ntAPPRIS P1 TSL 5 BASIC16.83■□□□□ 0.28
RpgrQ9R0X5 Gm9731-201ENSMUST00000209480 747 ntBASIC16.83■□□□□ 0.28
RpgrQ9R0X5 Gm6093-201ENSMUST00000221792 1623 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
RpgrQ9R0X5 Tm2d1-201ENSMUST00000030292 952 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
RpgrQ9R0X5 Grhpr-201ENSMUST00000045078 1280 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
RpgrQ9R0X5 Dok4-201ENSMUST00000046461 2590 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
RpgrQ9R0X5 Cops9-201ENSMUST00000097642 438 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
RpgrQ9R0X5 Lurap1-201ENSMUST00000030469 5742 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
RpgrQ9R0X5 Dnajc1-202ENSMUST00000091418 5070 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
RpgrQ9R0X5 Ube2j2-201ENSMUST00000024056 3483 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
RpgrQ9R0X5 Dnm1-216ENSMUST00000201494 2732 ntTSL 5 BASIC16.83■□□□□ 0.28
RpgrQ9R0X5 Eral1-201ENSMUST00000021183 2014 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
RpgrQ9R0X5 Cpeb3-201ENSMUST00000079754 5899 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
RpgrQ9R0X5 Dlg5-202ENSMUST00000073687 7784 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
RpgrQ9R0X5 Prps1l3-201ENSMUST00000139049 1720 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
RpgrQ9R0X5 Tbx3-202ENSMUST00000079719 4982 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
RpgrQ9R0X5 Trim28-201ENSMUST00000005705 3245 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
RpgrQ9R0X5 App-201ENSMUST00000005406 3176 ntAPPRIS P2 TSL 1 (best) BASIC16.82■□□□□ 0.28
RpgrQ9R0X5 6330411D24Rik-201ENSMUST00000211105 1568 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
RpgrQ9R0X5 2210016F16Rik-201ENSMUST00000022032 3051 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
RpgrQ9R0X5 Tmem163-203ENSMUST00000160616 2657 ntAPPRIS P1 TSL 2 BASIC16.82■□□□□ 0.28
RpgrQ9R0X5 1810041L15Rik-203ENSMUST00000189248 5296 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
RpgrQ9R0X5 Hbs1l-203ENSMUST00000092674 2625 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
RpgrQ9R0X5 Nkx2-2-203ENSMUST00000109970 1053 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
RpgrQ9R0X5 4833413E03Rik-201ENSMUST00000013706 1091 ntTSL 5 BASIC16.82■□□□□ 0.28
RpgrQ9R0X5 Sct-202ENSMUST00000167790 507 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
RpgrQ9R0X5 Ndufa12-201ENSMUST00000020209 1110 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
RpgrQ9R0X5 Cnih3-204ENSMUST00000209607 564 ntTSL 5 BASIC16.82■□□□□ 0.28
RpgrQ9R0X5 AC135963.1-201ENSMUST00000211640 717 ntBASIC16.82■□□□□ 0.28
RpgrQ9R0X5 Sct-201ENSMUST00000046156 534 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
RpgrQ9R0X5 Bub3-201ENSMUST00000084502 2218 ntAPPRIS P2 TSL 1 (best) BASIC16.82■□□□□ 0.28
RpgrQ9R0X5 Hap1-201ENSMUST00000103124 2120 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
RpgrQ9R0X5 Parg-204ENSMUST00000164137 3013 ntTSL 5 BASIC16.82■□□□□ 0.28
RpgrQ9R0X5 Aurkb-201ENSMUST00000021277 1950 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
RpgrQ9R0X5 Foxc2-201ENSMUST00000054691 2725 ntAPPRIS P1 BASIC16.82■□□□□ 0.28
RpgrQ9R0X5 Taf10-203ENSMUST00000141116 4281 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
RpgrQ9R0X5 Pitpnm1-201ENSMUST00000049658 4206 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
RpgrQ9R0X5 Tll1-201ENSMUST00000066166 4767 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
RpgrQ9R0X5 Rassf7-201ENSMUST00000046890 1525 ntAPPRIS P2 TSL 1 (best) BASIC16.81■□□□□ 0.28
RpgrQ9R0X5 Ddn-201ENSMUST00000075444 3740 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
RpgrQ9R0X5 Zpr1-206ENSMUST00000156440 2984 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
RpgrQ9R0X5 Nipal2-201ENSMUST00000040791 4331 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
RpgrQ9R0X5 Vhl-201ENSMUST00000035673 2792 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
RpgrQ9R0X5 Ggt6-202ENSMUST00000100903 1387 ntTSL 5 BASIC16.81■□□□□ 0.28
RpgrQ9R0X5 Opa3-202ENSMUST00000161711 1390 ntAPPRIS ALT2 TSL 2 BASIC16.81■□□□□ 0.28
RpgrQ9R0X5 Gm10516-201ENSMUST00000180598 2615 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
RpgrQ9R0X5 Npm3-ps1-201ENSMUST00000119728 528 ntBASIC16.81■□□□□ 0.28
RpgrQ9R0X5 Fau-203ENSMUST00000179142 736 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
RpgrQ9R0X5 D330020A13Rik-201ENSMUST00000181956 1069 ntAPPRIS P1 BASIC16.81■□□□□ 0.28
RpgrQ9R0X5 Stk11-210ENSMUST00000213772 1239 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
RpgrQ9R0X5 4932443I19Rik-204ENSMUST00000214337 1212 ntAPPRIS ALT2 TSL 5 BASIC16.81■□□□□ 0.28
RpgrQ9R0X5 Lce1m-201ENSMUST00000029520 874 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
RpgrQ9R0X5 Espn-202ENSMUST00000049305 1142 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
RpgrQ9R0X5 Npm3-201ENSMUST00000070215 888 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
RpgrQ9R0X5 Gzmd-201ENSMUST00000082093 964 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
RpgrQ9R0X5 Pi4k2b-201ENSMUST00000031081 3139 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
RpgrQ9R0X5 Clcn2-202ENSMUST00000120099 2812 ntAPPRIS ALT2 TSL 5 BASIC16.81■□□□□ 0.28
RpgrQ9R0X5 Shh-201ENSMUST00000002708 2847 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
RpgrQ9R0X5 Camsap3-201ENSMUST00000057028 4450 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
RpgrQ9R0X5 Atp6v0a1-203ENSMUST00000103110 2716 ntTSL 5 BASIC16.81■□□□□ 0.28
RpgrQ9R0X5 Apbb1-219ENSMUST00000191601 2690 ntAPPRIS P4 TSL 5 BASIC16.81■□□□□ 0.28
RpgrQ9R0X5 Prcc-201ENSMUST00000005015 2099 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
RpgrQ9R0X5 Zbtb2-201ENSMUST00000100077 3086 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
RpgrQ9R0X5 Rhpn2-201ENSMUST00000032705 3508 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
RpgrQ9R0X5 4930426L09Rik-201ENSMUST00000028069 1459 ntAPPRIS P1 BASIC16.8■□□□□ 0.28
RpgrQ9R0X5 Nkpd1-202ENSMUST00000207576 2916 ntAPPRIS P2 TSL 5 BASIC16.8■□□□□ 0.28
RpgrQ9R0X5 Mfsd10-202ENSMUST00000114329 1906 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
RpgrQ9R0X5 Tmem125-201ENSMUST00000060214 1864 ntAPPRIS P1 TSL 2 BASIC16.8■□□□□ 0.28
RpgrQ9R0X5 Adgrl1-210ENSMUST00000152978 5734 ntTSL 5 BASIC16.8■□□□□ 0.28
RpgrQ9R0X5 Sharpin-201ENSMUST00000023211 1734 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
RpgrQ9R0X5 Zdhhc24-201ENSMUST00000006632 2558 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
RpgrQ9R0X5 Atf7ip2-204ENSMUST00000119023 1048 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
RpgrQ9R0X5 Rcbtb2-217ENSMUST00000167401 868 ntTSL 5 BASIC16.8■□□□□ 0.28
RpgrQ9R0X5 Tlx1os-201ENSMUST00000173437 620 ntTSL 3 BASIC16.8■□□□□ 0.28
RpgrQ9R0X5 Ssr2-207ENSMUST00000195014 1059 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
RpgrQ9R0X5 Casp3-203ENSMUST00000210534 583 ntTSL 5 BASIC16.8■□□□□ 0.28
RpgrQ9R0X5 Dctn3-201ENSMUST00000030158 973 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
RpgrQ9R0X5 Tollip-202ENSMUST00000055819 1100 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
RpgrQ9R0X5 Gm5417-201ENSMUST00000079706 384 ntBASIC16.8■□□□□ 0.28
RpgrQ9R0X5 Rps28-201ENSMUST00000087342 392 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
RpgrQ9R0X5 Il17rb-202ENSMUST00000122205 2094 ntAPPRIS ALT2 TSL 5 BASIC16.8■□□□□ 0.28
RpgrQ9R0X5 Fmnl3-201ENSMUST00000081224 4137 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
RpgrQ9R0X5 Ube2i-207ENSMUST00000172868 2755 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
RpgrQ9R0X5 Podxl2-201ENSMUST00000038409 1994 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
RpgrQ9R0X5 Kri1-201ENSMUST00000038671 2598 ntAPPRIS P2 TSL 1 (best) BASIC16.8■□□□□ 0.28
RpgrQ9R0X5 Cxcl14-201ENSMUST00000021970 1827 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
RpgrQ9R0X5 Lhx3-202ENSMUST00000054099 2184 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
RpgrQ9R0X5 Gpr150-201ENSMUST00000056130 2146 ntAPPRIS P1 BASIC16.79■□□□□ 0.28
RpgrQ9R0X5 Nfs1-201ENSMUST00000029147 2051 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
RpgrQ9R0X5 Gprc5c-203ENSMUST00000122967 1709 ntTSL 5 BASIC16.79■□□□□ 0.28
RpgrQ9R0X5 St6gal2-201ENSMUST00000025000 6066 ntAPPRIS P1 TSL 5 BASIC16.79■□□□□ 0.28
RpgrQ9R0X5 Bag4-201ENSMUST00000038498 4876 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
RpgrQ9R0X5 Gm1673-203ENSMUST00000114383 511 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
RpgrQ9R0X5 Gm12979-201ENSMUST00000145488 405 ntTSL 2 BASIC16.79■□□□□ 0.28
RpgrQ9R0X5 Ccnd2-204ENSMUST00000201637 1006 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
RpgrQ9R0X5 Otx2os1-204ENSMUST00000227221 751 ntBASIC16.79■□□□□ 0.28
RpgrQ9R0X5 Fitm1-201ENSMUST00000022826 971 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
RpgrQ9R0X5 Nme2-202ENSMUST00000072566 734 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
RpgrQ9R0X5 Nnat-201ENSMUST00000088484 458 ntTSL 2 BASIC16.79■□□□□ 0.28
RpgrQ9R0X5 Gpr180-201ENSMUST00000022728 1875 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Retrieved 100 of 76,532 protein–RNA pairs in 25.3 ms