Protein–RNA interactions for Protein: Q9D7D1

Rnf225, RING finger protein 225, mousemouse

Predictions only

Length 332 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf225Q9D7D1 Chmp2a-203ENSMUST00000210587 930 ntAPPRIS P1 TSL 3 BASIC17.39■□□□□ 0.37
Rnf225Q9D7D1 Spef1-201ENSMUST00000028801 2328 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Rnf225Q9D7D1 Hhatl-201ENSMUST00000035110 1870 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Rnf225Q9D7D1 Pgap3-202ENSMUST00000090827 2419 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Rnf225Q9D7D1 Mtx2-201ENSMUST00000028511 2950 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Rnf225Q9D7D1 4732440D04Rik-203ENSMUST00000191825 5428 ntBASIC17.39■□□□□ 0.37
Rnf225Q9D7D1 Il6st-206ENSMUST00000183886 3004 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Rnf225Q9D7D1 Nipsnap1-201ENSMUST00000038570 1926 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Rnf225Q9D7D1 Tspan5-201ENSMUST00000029800 6653 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Rnf225Q9D7D1 Ints8-201ENSMUST00000044616 3433 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Rnf225Q9D7D1 Kcnq2-204ENSMUST00000103047 2899 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Rnf225Q9D7D1 Slc6a1-204ENSMUST00000204074 1740 ntTSL 5 BASIC17.38■□□□□ 0.37
Rnf225Q9D7D1 Gm17200-201ENSMUST00000170214 2022 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Rnf225Q9D7D1 Olah-203ENSMUST00000194918 1764 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Rnf225Q9D7D1 Ccnyl1-202ENSMUST00000114077 3281 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Rnf225Q9D7D1 Hmgxb3-201ENSMUST00000091884 5101 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Rnf225Q9D7D1 Bnip2-201ENSMUST00000034754 2464 ntAPPRIS P4 TSL 1 (best) BASIC17.38■□□□□ 0.37
Rnf225Q9D7D1 Chst5-201ENSMUST00000034430 2182 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Rnf225Q9D7D1 Rps6kb2-201ENSMUST00000025749 1864 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Rnf225Q9D7D1 2210408F21Rik-208ENSMUST00000144612 450 ntTSL 3 BASIC17.38■□□□□ 0.37
Rnf225Q9D7D1 Rpl14-201ENSMUST00000165532 1009 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Rnf225Q9D7D1 Msmb-201ENSMUST00000022464 562 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Rnf225Q9D7D1 Usf3-201ENSMUST00000088356 757 ntAPPRIS ALT2 TSL 5 BASIC17.38■□□□□ 0.37
Rnf225Q9D7D1 Neil3-201ENSMUST00000047768 2253 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Rnf225Q9D7D1 Zmynd19-201ENSMUST00000028350 3903 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Rnf225Q9D7D1 Wnk2-205ENSMUST00000110097 6882 ntAPPRIS ALT2 TSL 5 BASIC17.38■□□□□ 0.37
Rnf225Q9D7D1 Wnk2-203ENSMUST00000091623 6897 ntAPPRIS P4 TSL 5 BASIC17.38■□□□□ 0.37
Rnf225Q9D7D1 Gramd3-201ENSMUST00000070166 2605 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Rnf225Q9D7D1 Ankrd23-201ENSMUST00000054665 1964 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Rnf225Q9D7D1 Tex261-201ENSMUST00000014892 2984 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Rnf225Q9D7D1 Spg21-202ENSMUST00000213957 1302 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Rnf225Q9D7D1 Rcc1-203ENSMUST00000105951 2326 ntAPPRIS P1 TSL 5 BASIC17.38■□□□□ 0.37
Rnf225Q9D7D1 Smarca4-202ENSMUST00000098948 6376 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
Rnf225Q9D7D1 Cadm1-204ENSMUST00000114548 4482 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Rnf225Q9D7D1 Mff-211ENSMUST00000161648 1715 ntTSL 5 BASIC17.38■□□□□ 0.37
Rnf225Q9D7D1 Larp1-203ENSMUST00000178636 6617 ntAPPRIS P2 TSL 5 BASIC17.38■□□□□ 0.37
Rnf225Q9D7D1 Mafg-201ENSMUST00000058162 4923 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Rnf225Q9D7D1 Prdm12-201ENSMUST00000113470 2471 ntAPPRIS P1 TSL 5 BASIC17.38■□□□□ 0.37
Rnf225Q9D7D1 Ctu1-201ENSMUST00000038332 2475 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Rnf225Q9D7D1 Slc13a3-202ENSMUST00000109279 3131 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
Rnf225Q9D7D1 Haus4-201ENSMUST00000022784 1587 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Rnf225Q9D7D1 Nkx2-1-201ENSMUST00000001536 2809 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Rnf225Q9D7D1 Npb-202ENSMUST00000106194 530 ntAPPRIS ALT2 TSL 2 BASIC17.37■□□□□ 0.37
Rnf225Q9D7D1 Npb-203ENSMUST00000106195 542 ntAPPRIS P3 TSL 1 (best) BASIC17.37■□□□□ 0.37
Rnf225Q9D7D1 Gm20878-202ENSMUST00000108028 339 ntAPPRIS ALT2 TSL 5 BASIC17.37■□□□□ 0.37
Rnf225Q9D7D1 Rps5-202ENSMUST00000108539 794 ntAPPRIS P1 TSL 2 BASIC17.37■□□□□ 0.37
Rnf225Q9D7D1 Sap18-203ENSMUST00000111269 459 ntTSL 2 BASIC17.37■□□□□ 0.37
Rnf225Q9D7D1 Gm15545-203ENSMUST00000150613 1059 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Rnf225Q9D7D1 Ttc32-203ENSMUST00000219488 768 ntTSL 3 BASIC17.37■□□□□ 0.37
Rnf225Q9D7D1 AL731706.1-201ENSMUST00000227806 944 ntAPPRIS ALT2 BASIC17.37■□□□□ 0.37
Rnf225Q9D7D1 Oosp3-201ENSMUST00000069760 807 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Rnf225Q9D7D1 Exosc5-201ENSMUST00000079634 1020 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Rnf225Q9D7D1 Rad51d-203ENSMUST00000092844 1228 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Rnf225Q9D7D1 3110070M22Rik-201ENSMUST00000099148 1123 ntAPPRIS P1 BASIC17.37■□□□□ 0.37
Rnf225Q9D7D1 Tjap1-214ENSMUST00000225413 2189 ntAPPRIS ALT2 BASIC17.37■□□□□ 0.37
Rnf225Q9D7D1 Poli-203ENSMUST00000159389 2662 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Rnf225Q9D7D1 Tspyl2-201ENSMUST00000044509 2696 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Rnf225Q9D7D1 Ly6e-201ENSMUST00000051698 2281 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Rnf225Q9D7D1 Satb1-211ENSMUST00000152830 5993 ntAPPRIS P2 TSL 2 BASIC17.37■□□□□ 0.37
Rnf225Q9D7D1 Plaa-201ENSMUST00000107107 2784 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Rnf225Q9D7D1 Tprn-201ENSMUST00000114336 2787 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Rnf225Q9D7D1 Gdf5-201ENSMUST00000040162 2320 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Rnf225Q9D7D1 Pskh1-201ENSMUST00000049699 3255 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Rnf225Q9D7D1 Ube2e1-201ENSMUST00000022296 1408 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Rnf225Q9D7D1 Caskin1-201ENSMUST00000024958 6172 ntAPPRIS P1 TSL 5 BASIC17.37■□□□□ 0.37
Rnf225Q9D7D1 Apoa5-202ENSMUST00000121598 2515 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Rnf225Q9D7D1 Degs1-201ENSMUST00000035295 2048 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Rnf225Q9D7D1 Luc7l2-213ENSMUST00000163047 3141 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Rnf225Q9D7D1 Gpha2-202ENSMUST00000113526 762 ntAPPRIS P1 TSL 5 BASIC17.36■□□□□ 0.37
Rnf225Q9D7D1 Gm1673-202ENSMUST00000114382 451 ntAPPRIS ALT2 TSL 2 BASIC17.36■□□□□ 0.37
Rnf225Q9D7D1 Gnb2-209ENSMUST00000143495 1285 ntTSL 5 BASIC17.36■□□□□ 0.37
Rnf225Q9D7D1 Psmd13-209ENSMUST00000164681 726 ntTSL 5 BASIC17.36■□□□□ 0.37
Rnf225Q9D7D1 Bvht-202ENSMUST00000183087 588 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Rnf225Q9D7D1 4930579K19Rik-202ENSMUST00000190541 632 ntTSL 2 BASIC17.36■□□□□ 0.37
Rnf225Q9D7D1 Gm37002-201ENSMUST00000194560 373 ntBASIC17.36■□□□□ 0.37
Rnf225Q9D7D1 Bcl7c-205ENSMUST00000205977 891 ntTSL 2 BASIC17.36■□□□□ 0.37
Rnf225Q9D7D1 AC159205.3-201ENSMUST00000224614 874 ntBASIC17.36■□□□□ 0.37
Rnf225Q9D7D1 Gpha2-201ENSMUST00000025698 609 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Rnf225Q9D7D1 Mrpl21-202ENSMUST00000025745 1138 ntAPPRIS P3 TSL 1 (best) BASIC17.36■□□□□ 0.37
Rnf225Q9D7D1 Snrnp35-201ENSMUST00000031349 1115 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Rnf225Q9D7D1 Tbcb-201ENSMUST00000006254 1416 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Rnf225Q9D7D1 Gm11748-201ENSMUST00000153825 1498 ntTSL 2 BASIC17.36■□□□□ 0.37
Rnf225Q9D7D1 Wdr55-201ENSMUST00000049323 1498 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Rnf225Q9D7D1 Kmt2b-201ENSMUST00000006470 8469 ntAPPRIS ALT2 TSL 5 BASIC17.36■□□□□ 0.37
Rnf225Q9D7D1 Anks1b-219ENSMUST00000182600 1697 ntTSL 5 BASIC17.36■□□□□ 0.37
Rnf225Q9D7D1 Rev1-201ENSMUST00000027251 4262 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Rnf225Q9D7D1 Chaf1b-201ENSMUST00000023666 1922 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Rnf225Q9D7D1 Klhdc4-201ENSMUST00000045884 2078 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Rnf225Q9D7D1 Tenm3-204ENSMUST00000110346 2267 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Rnf225Q9D7D1 Wipf1-201ENSMUST00000094681 4728 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Rnf225Q9D7D1 Glra1-202ENSMUST00000102716 2390 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
Rnf225Q9D7D1 Prr14-201ENSMUST00000033095 2402 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Rnf225Q9D7D1 Smgc-203ENSMUST00000109276 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Rnf225Q9D7D1 AA467197-202ENSMUST00000110512 751 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Rnf225Q9D7D1 Gm8312-201ENSMUST00000119380 618 ntBASIC17.35■□□□□ 0.37
Rnf225Q9D7D1 Tmem150cos-201ENSMUST00000143245 1216 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Rnf225Q9D7D1 4930515G01Rik-201ENSMUST00000173208 1247 ntBASIC17.35■□□□□ 0.37
Rnf225Q9D7D1 Nudt8-202ENSMUST00000025802 787 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Rnf225Q9D7D1 Vmn1r34-201ENSMUST00000074381 930 ntAPPRIS P1 BASIC17.35■□□□□ 0.37
Rnf225Q9D7D1 Hist3h2ba-201ENSMUST00000078267 614 ntAPPRIS P1 BASIC17.35■□□□□ 0.37
Retrieved 100 of 76,532 protein–RNA pairs in 27.5 ms