Protein–RNA interactions for Protein: Q99NI3

Gtf2ird2, General transcription factor II-I repeat domain-containing protein 2, mousemouse

Predictions only

Length 936 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gtf2ird2Q99NI3 1300014J16Rik-201ENSMUST00000219015 1337 ntBASIC17.01■□□□□ 0.31
Gtf2ird2Q99NI3 Tox2-205ENSMUST00000165937 1675 ntAPPRIS P2 TSL 5 BASIC17.01■□□□□ 0.31
Gtf2ird2Q99NI3 Iqcd-202ENSMUST00000094391 1673 ntAPPRIS P2 TSL 1 (best) BASIC17.01■□□□□ 0.31
Gtf2ird2Q99NI3 Dnm1-216ENSMUST00000201494 2732 ntTSL 5 BASIC17.01■□□□□ 0.31
Gtf2ird2Q99NI3 Card10-203ENSMUST00000170584 3220 ntAPPRIS ALT2 TSL 5 BASIC17.01■□□□□ 0.31
Gtf2ird2Q99NI3 Gm3468-201ENSMUST00000165193 1955 ntAPPRIS P1 TSL 5 BASIC17.01■□□□□ 0.31
Gtf2ird2Q99NI3 Gm2956-201ENSMUST00000177786 1955 ntAPPRIS P1 TSL 5 BASIC17.01■□□□□ 0.31
Gtf2ird2Q99NI3 Rab27b-202ENSMUST00000117692 2842 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Gtf2ird2Q99NI3 Abcg5-202ENSMUST00000163375 1613 ntTSL 5 BASIC17.01■□□□□ 0.31
Gtf2ird2Q99NI3 Gm12781-201ENSMUST00000146269 395 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Gtf2ird2Q99NI3 Sytl3-204ENSMUST00000159880 1296 ntTSL 5 BASIC17.01■□□□□ 0.31
Gtf2ird2Q99NI3 Flg-207ENSMUST00000180293 768 ntAPPRIS ALT2 BASIC17.01■□□□□ 0.31
Gtf2ird2Q99NI3 Gm27704-201ENSMUST00000185094 107 ntBASIC17.01■□□□□ 0.31
Gtf2ird2Q99NI3 Gm45328-201ENSMUST00000210942 917 ntBASIC17.01■□□□□ 0.31
Gtf2ird2Q99NI3 AC130713.1-201ENSMUST00000228853 1096 ntBASIC17.01■□□□□ 0.31
Gtf2ird2Q99NI3 Atp6v1c1-201ENSMUST00000022904 2071 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Gtf2ird2Q99NI3 Gm20517-202ENSMUST00000132397 4807 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Gtf2ird2Q99NI3 Krt81-201ENSMUST00000061185 1857 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Gtf2ird2Q99NI3 Fam135a-201ENSMUST00000027337 5536 ntAPPRIS P2 TSL 5 BASIC17.01■□□□□ 0.31
Gtf2ird2Q99NI3 Gm37166-201ENSMUST00000195473 2474 ntBASIC17.01■□□□□ 0.31
Gtf2ird2Q99NI3 Gm11620-201ENSMUST00000118770 1845 ntBASIC17■□□□□ 0.31
Gtf2ird2Q99NI3 Otud5-202ENSMUST00000115665 3821 ntTSL 5 BASIC17■□□□□ 0.31
Gtf2ird2Q99NI3 Elac2-202ENSMUST00000101049 2884 ntAPPRIS ALT2 TSL 5 BASIC17■□□□□ 0.31
Gtf2ird2Q99NI3 Dzip3-202ENSMUST00000121869 5820 ntAPPRIS ALT2 TSL 5 BASIC17■□□□□ 0.31
Gtf2ird2Q99NI3 Cops6-201ENSMUST00000019638 1787 ntAPPRIS P2 TSL 1 (best) BASIC17■□□□□ 0.31
Gtf2ird2Q99NI3 Zfp655-206ENSMUST00000200039 1765 ntAPPRIS ALT1 TSL 1 (best) BASIC17■□□□□ 0.31
Gtf2ird2Q99NI3 Arhgef9-216ENSMUST00000197206 2227 ntTSL 5 BASIC17■□□□□ 0.31
Gtf2ird2Q99NI3 Kif7-202ENSMUST00000178048 4524 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
Gtf2ird2Q99NI3 Snx25-203ENSMUST00000110378 3445 ntAPPRIS ALT2 TSL 5 BASIC17■□□□□ 0.31
Gtf2ird2Q99NI3 Gm13563-202ENSMUST00000150375 851 ntTSL 3 BASIC17■□□□□ 0.31
Gtf2ird2Q99NI3 Znhit2-201ENSMUST00000162726 1281 ntAPPRIS P1 BASIC17■□□□□ 0.31
Gtf2ird2Q99NI3 Sart3-201ENSMUST00000019118 4447 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Gtf2ird2Q99NI3 Pym1-201ENSMUST00000065210 1156 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
Gtf2ird2Q99NI3 Stk35-202ENSMUST00000166282 5445 ntTSL 1 (best) BASIC17■□□□□ 0.31
Gtf2ird2Q99NI3 Cdca7l-201ENSMUST00000021592 2957 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Gtf2ird2Q99NI3 Sphk1-201ENSMUST00000063396 2659 ntAPPRIS ALT2 TSL 2 BASIC17■□□□□ 0.31
Gtf2ird2Q99NI3 Epha10-201ENSMUST00000059343 2544 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Gtf2ird2Q99NI3 Chtf8-206ENSMUST00000177068 2931 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Gtf2ird2Q99NI3 Nmnat3-201ENSMUST00000112935 2166 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Gtf2ird2Q99NI3 Slc6a8-206ENSMUST00000164449 2151 ntTSL 5 BASIC16.99■□□□□ 0.31
Gtf2ird2Q99NI3 Eral1-201ENSMUST00000021183 2014 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Gtf2ird2Q99NI3 Magix-201ENSMUST00000115695 1342 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Gtf2ird2Q99NI3 4930455H04Rik-201ENSMUST00000117592 1341 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Gtf2ird2Q99NI3 Clcn2-202ENSMUST00000120099 2812 ntAPPRIS ALT2 TSL 5 BASIC16.99■□□□□ 0.31
Gtf2ird2Q99NI3 Simc1-201ENSMUST00000118072 2116 ntAPPRIS ALT2 TSL 5 BASIC16.99■□□□□ 0.31
Gtf2ird2Q99NI3 4930474H06Rik-201ENSMUST00000132822 1590 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
Gtf2ird2Q99NI3 Fgf8-205ENSMUST00000111927 843 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
Gtf2ird2Q99NI3 Mdfi-203ENSMUST00000113280 1281 ntTSL 5 BASIC16.99■□□□□ 0.31
Gtf2ird2Q99NI3 Dohh-202ENSMUST00000121047 946 ntTSL 2 BASIC16.99■□□□□ 0.31
Gtf2ird2Q99NI3 Gm12359-202ENSMUST00000141696 713 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
Gtf2ird2Q99NI3 Gm12359-203ENSMUST00000153181 680 ntTSL 3 BASIC16.99■□□□□ 0.31
Gtf2ird2Q99NI3 Gm18421-201ENSMUST00000204122 625 ntBASIC16.99■□□□□ 0.31
Gtf2ird2Q99NI3 BC048679-203ENSMUST00000207871 567 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
Gtf2ird2Q99NI3 Ak6-201ENSMUST00000022135 1298 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Gtf2ird2Q99NI3 Sdhaf4-201ENSMUST00000027338 683 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Gtf2ird2Q99NI3 Odf3b-201ENSMUST00000049968 1040 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Gtf2ird2Q99NI3 Sftpb-201ENSMUST00000070437 1131 ntAPPRIS ALT2 TSL 5 BASIC16.99■□□□□ 0.31
Gtf2ird2Q99NI3 Prima1-201ENSMUST00000074416 909 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Gtf2ird2Q99NI3 Bicc1-203ENSMUST00000143791 5431 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Gtf2ird2Q99NI3 Rbpms-203ENSMUST00000053251 2466 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
Gtf2ird2Q99NI3 B4galt3-205ENSMUST00000126699 1758 ntTSL 5 BASIC16.99■□□□□ 0.31
Gtf2ird2Q99NI3 Homez-202ENSMUST00000142283 4713 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Gtf2ird2Q99NI3 Gm16638-201ENSMUST00000148687 1865 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
Gtf2ird2Q99NI3 Hoxc4-202ENSMUST00000165375 2121 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
Gtf2ird2Q99NI3 Stk33-201ENSMUST00000090414 2221 ntAPPRIS P1 TSL 5 BASIC16.98■□□□□ 0.31
Gtf2ird2Q99NI3 Dnajc19-201ENSMUST00000011029 2499 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
Gtf2ird2Q99NI3 Pitpnm1-201ENSMUST00000049658 4206 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Gtf2ird2Q99NI3 Zfp264-201ENSMUST00000208656 1563 ntBASIC16.98■□□□□ 0.31
Gtf2ird2Q99NI3 Kdm2a-202ENSMUST00000075856 7242 ntAPPRIS P1 TSL 5 BASIC16.98■□□□□ 0.31
Gtf2ird2Q99NI3 Bean1-201ENSMUST00000093245 3199 ntAPPRIS ALT2 TSL 1 (best) BASIC16.98■□□□□ 0.31
Gtf2ird2Q99NI3 Mycn-201ENSMUST00000043396 2674 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Gtf2ird2Q99NI3 Tedc2-201ENSMUST00000024930 2166 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Gtf2ird2Q99NI3 Etv6-201ENSMUST00000081028 5545 ntAPPRIS P1 TSL 2 BASIC16.98■□□□□ 0.31
Gtf2ird2Q99NI3 Casp3-201ENSMUST00000093517 1520 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Gtf2ird2Q99NI3 Ramp2-204ENSMUST00000129680 1178 ntAPPRIS P2 TSL 1 (best) BASIC16.98■□□□□ 0.31
Gtf2ird2Q99NI3 Ighv6-1-201ENSMUST00000193612 343 ntBASIC16.98■□□□□ 0.31
Gtf2ird2Q99NI3 Rhot2-201ENSMUST00000043897 3189 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Gtf2ird2Q99NI3 Zic3-202ENSMUST00000088629 1951 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
Gtf2ird2Q99NI3 Ager-201ENSMUST00000015596 1370 ntAPPRIS P3 TSL 1 (best) BASIC16.98■□□□□ 0.31
Gtf2ird2Q99NI3 Ap1m1-201ENSMUST00000003117 2084 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Gtf2ird2Q99NI3 Col17a1-201ENSMUST00000026045 5588 ntAPPRIS ALT2 TSL 1 (best) BASIC16.98■□□□□ 0.31
Gtf2ird2Q99NI3 Plpp6-201ENSMUST00000045674 2859 ntAPPRIS P1 BASIC16.98■□□□□ 0.31
Gtf2ird2Q99NI3 Ldb1-205ENSMUST00000137771 2014 ntTSL 5 BASIC16.97■□□□□ 0.31
Gtf2ird2Q99NI3 Pick1-206ENSMUST00000166155 1699 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Gtf2ird2Q99NI3 Tyk2-205ENSMUST00000214864 1662 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
Gtf2ird2Q99NI3 Tmem233-201ENSMUST00000111997 2477 ntAPPRIS P1 TSL 2 BASIC16.97■□□□□ 0.31
Gtf2ird2Q99NI3 Letm1-203ENSMUST00000148451 2478 ntTSL 2 BASIC16.97■□□□□ 0.31
Gtf2ird2Q99NI3 Rgl2-201ENSMUST00000047503 3252 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Gtf2ird2Q99NI3 Nsun5-201ENSMUST00000000940 2243 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Gtf2ird2Q99NI3 Wdr41-205ENSMUST00000160801 3062 ntAPPRIS P1 TSL 5 BASIC16.97■□□□□ 0.31
Gtf2ird2Q99NI3 Wdr41-201ENSMUST00000056512 3063 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Gtf2ird2Q99NI3 Zufsp-202ENSMUST00000218055 2180 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Gtf2ird2Q99NI3 Dbndd2-204ENSMUST00000109350 1055 ntAPPRIS P1 TSL 2 BASIC16.97■□□□□ 0.31
Gtf2ird2Q99NI3 Mmp17-201ENSMUST00000031390 6422 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Gtf2ird2Q99NI3 Kdm5b-203ENSMUST00000112198 5413 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
Gtf2ird2Q99NI3 Nudt4-201ENSMUST00000020217 3210 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Gtf2ird2Q99NI3 Cdk9-202ENSMUST00000120105 1565 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
Gtf2ird2Q99NI3 Adnp-202ENSMUST00000088001 4932 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Gtf2ird2Q99NI3 Myo5a-214ENSMUST00000155282 6372 ntAPPRIS P5 TSL 5 BASIC16.97■□□□□ 0.31
Gtf2ird2Q99NI3 Cd5-201ENSMUST00000025571 2069 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Retrieved 100 of 76,532 protein–RNA pairs in 44.4 ms