Protein–RNA interactions for Protein: Q99MB1

Tlr3, Toll-like receptor 3, mousemouse

Predictions only

Length 905 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tlr3Q99MB1 Sf1-202ENSMUST00000113487 2649 ntAPPRIS ALT1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Tlr3Q99MB1 Letm1-203ENSMUST00000148451 2478 ntTSL 2 BASIC17.75■□□□□ 0.43
Tlr3Q99MB1 Saysd1-201ENSMUST00000059666 2315 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Tlr3Q99MB1 Erich2-203ENSMUST00000134607 1659 ntAPPRIS ALT2 TSL 5 BASIC17.75■□□□□ 0.43
Tlr3Q99MB1 Fam149b-216ENSMUST00000225942 2151 ntAPPRIS ALT2 BASIC17.75■□□□□ 0.43
Tlr3Q99MB1 Mafg-202ENSMUST00000106180 732 ntAPPRIS P1 TSL 2 BASIC17.75■□□□□ 0.43
Tlr3Q99MB1 Mafg-204ENSMUST00000106182 1104 ntAPPRIS P1 TSL 2 BASIC17.75■□□□□ 0.43
Tlr3Q99MB1 Asnsd1-202ENSMUST00000123519 983 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Tlr3Q99MB1 Gm12781-201ENSMUST00000146269 395 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Tlr3Q99MB1 Gm25016-201ENSMUST00000158399 131 ntBASIC17.75■□□□□ 0.43
Tlr3Q99MB1 Psma6-201ENSMUST00000021412 1042 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Tlr3Q99MB1 Ttc32-203ENSMUST00000219488 768 ntTSL 3 BASIC17.75■□□□□ 0.43
Tlr3Q99MB1 Mgst3-201ENSMUST00000028005 1097 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Tlr3Q99MB1 Hint2-201ENSMUST00000030192 610 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Tlr3Q99MB1 Nkx2-6-201ENSMUST00000062437 1134 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Tlr3Q99MB1 Lsm1-201ENSMUST00000038421 2663 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Tlr3Q99MB1 Ptprs-201ENSMUST00000067538 6855 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Tlr3Q99MB1 Tead3-205ENSMUST00000154873 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
Tlr3Q99MB1 Uhrf2-201ENSMUST00000025739 3536 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Tlr3Q99MB1 Lonp2-201ENSMUST00000034141 2860 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Tlr3Q99MB1 Sox18-201ENSMUST00000054491 1620 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Tlr3Q99MB1 Arhgap39-202ENSMUST00000077821 4494 ntAPPRIS P3 TSL 1 (best) BASIC17.75■□□□□ 0.43
Tlr3Q99MB1 Gm26627-201ENSMUST00000181540 1487 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Tlr3Q99MB1 Wdr55-201ENSMUST00000049323 1498 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Tlr3Q99MB1 Hand1-203ENSMUST00000160392 1806 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Tlr3Q99MB1 Nmt2-203ENSMUST00000102989 2162 ntAPPRIS P1 TSL 5 BASIC17.74■□□□□ 0.43
Tlr3Q99MB1 Kdm5b-203ENSMUST00000112198 5413 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
Tlr3Q99MB1 Tm6sf2-202ENSMUST00000110160 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Tlr3Q99MB1 Cacna1c-216ENSMUST00000188522 7338 ntAPPRIS ALT2 TSL 5 BASIC17.74■□□□□ 0.43
Tlr3Q99MB1 Btbd11-203ENSMUST00000105307 5788 ntAPPRIS P3 TSL 1 (best) BASIC17.74■□□□□ 0.43
Tlr3Q99MB1 Lin9-203ENSMUST00000192561 3160 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Tlr3Q99MB1 Shox2-202ENSMUST00000162060 1537 ntTSL 3 BASIC17.74■□□□□ 0.43
Tlr3Q99MB1 Hoxd4-201ENSMUST00000047904 2560 ntAPPRIS P1 TSL 5 BASIC17.74■□□□□ 0.43
Tlr3Q99MB1 Sh3glb1-202ENSMUST00000198254 5945 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Tlr3Q99MB1 Pqlc1-202ENSMUST00000091798 1989 ntAPPRIS P3 TSL 5 BASIC17.74■□□□□ 0.43
Tlr3Q99MB1 Gm11336-201ENSMUST00000118168 334 ntBASIC17.74■□□□□ 0.43
Tlr3Q99MB1 Gm15889-201ENSMUST00000159142 1083 ntTSL 3 BASIC17.74■□□□□ 0.43
Tlr3Q99MB1 Bvht-202ENSMUST00000183087 588 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Tlr3Q99MB1 Gm27389-201ENSMUST00000183622 195 ntBASIC17.74■□□□□ 0.43
Tlr3Q99MB1 Iscu-201ENSMUST00000026937 957 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Tlr3Q99MB1 Ptcra-201ENSMUST00000041012 1283 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Tlr3Q99MB1 Exosc5-201ENSMUST00000079634 1020 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Tlr3Q99MB1 Tbpl1-201ENSMUST00000095794 1195 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Tlr3Q99MB1 Lrch3-203ENSMUST00000135193 2794 ntAPPRIS ALT2 TSL 5 BASIC17.74■□□□□ 0.43
Tlr3Q99MB1 Shroom4-202ENSMUST00000103005 4839 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Tlr3Q99MB1 Drd2-201ENSMUST00000075764 2547 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Tlr3Q99MB1 Gnaz-201ENSMUST00000037813 3519 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Tlr3Q99MB1 Atp6v1b2-201ENSMUST00000006435 2825 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Tlr3Q99MB1 Zfp264-201ENSMUST00000208656 1563 ntBASIC17.74■□□□□ 0.43
Tlr3Q99MB1 Disc1-208ENSMUST00000122389 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
Tlr3Q99MB1 Zfp655-206ENSMUST00000200039 1765 ntAPPRIS ALT1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Tlr3Q99MB1 Fam3a-206ENSMUST00000114143 1899 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Tlr3Q99MB1 Lrrtm1-202ENSMUST00000159616 2541 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Tlr3Q99MB1 Gm3468-201ENSMUST00000165193 1955 ntAPPRIS P1 TSL 5 BASIC17.73■□□□□ 0.43
Tlr3Q99MB1 Gm2956-201ENSMUST00000177786 1955 ntAPPRIS P1 TSL 5 BASIC17.73■□□□□ 0.43
Tlr3Q99MB1 Nelfb-201ENSMUST00000059849 2637 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Tlr3Q99MB1 Mbnl1-201ENSMUST00000099087 5655 ntAPPRIS P2 TSL 1 (best) BASIC17.73■□□□□ 0.43
Tlr3Q99MB1 Clasrp-201ENSMUST00000086041 2180 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Tlr3Q99MB1 Aptx-203ENSMUST00000108103 2391 ntAPPRIS ALT2 TSL 5 BASIC17.73■□□□□ 0.43
Tlr3Q99MB1 Pkn1-201ENSMUST00000005616 6662 ntAPPRIS P3 TSL 1 (best) BASIC17.73■□□□□ 0.43
Tlr3Q99MB1 Spata6-201ENSMUST00000038868 2466 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Tlr3Q99MB1 Ankrd17-203ENSMUST00000168058 9311 ntAPPRIS ALT2 TSL 5 BASIC17.73■□□□□ 0.43
Tlr3Q99MB1 Isyna1-204ENSMUST00000210005 1914 ntAPPRIS P1 TSL 5 BASIC17.73■□□□□ 0.43
Tlr3Q99MB1 Dohh-202ENSMUST00000121047 946 ntTSL 2 BASIC17.73■□□□□ 0.43
Tlr3Q99MB1 Zfp629-206ENSMUST00000132524 215 ntTSL 5 BASIC17.73■□□□□ 0.43
Tlr3Q99MB1 Ptgis-201ENSMUST00000018113 2107 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Tlr3Q99MB1 Efcab11-207ENSMUST00000223114 1122 ntAPPRIS P1 TSL 5 BASIC17.73■□□□□ 0.43
Tlr3Q99MB1 Krtcap3-201ENSMUST00000054829 904 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Tlr3Q99MB1 4933427E11Rik-201ENSMUST00000056711 1214 ntBASIC17.73■□□□□ 0.43
Tlr3Q99MB1 Tmem35b-201ENSMUST00000094712 1120 ntAPPRIS P2 TSL 1 (best) BASIC17.73■□□□□ 0.43
Tlr3Q99MB1 Lrrc7-201ENSMUST00000106044 5918 ntAPPRIS ALT2 TSL 5 BASIC17.73■□□□□ 0.43
Tlr3Q99MB1 Mrpl37-201ENSMUST00000030365 1498 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Tlr3Q99MB1 Atp8b1-201ENSMUST00000025482 6440 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Tlr3Q99MB1 Cadm3-201ENSMUST00000005470 2518 ntTSL 5 BASIC17.73■□□□□ 0.43
Tlr3Q99MB1 Unc13b-203ENSMUST00000107953 5034 ntAPPRIS ALT2 TSL 5 BASIC17.73■□□□□ 0.43
Tlr3Q99MB1 Gtf2h4-201ENSMUST00000001565 1679 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Tlr3Q99MB1 Znrf1-201ENSMUST00000095176 3108 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Tlr3Q99MB1 Cdk17-201ENSMUST00000069965 3615 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Tlr3Q99MB1 Gm18336-201ENSMUST00000180787 2298 ntAPPRIS P1 BASIC17.73■□□□□ 0.43
Tlr3Q99MB1 Cnot9-201ENSMUST00000087215 3268 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Tlr3Q99MB1 Nit1-202ENSMUST00000111295 1335 ntAPPRIS P3 TSL 1 (best) BASIC17.72■□□□□ 0.43
Tlr3Q99MB1 Gm7609-201ENSMUST00000113402 1538 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Tlr3Q99MB1 Apbb1-205ENSMUST00000187057 1630 ntTSL 5 BASIC17.72■□□□□ 0.43
Tlr3Q99MB1 Fezf1-201ENSMUST00000031709 2409 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Tlr3Q99MB1 Thsd7a-202ENSMUST00000119581 5678 ntAPPRIS P2 TSL 5 BASIC17.72■□□□□ 0.43
Tlr3Q99MB1 Lzts2-203ENSMUST00000179108 2781 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Tlr3Q99MB1 Klc1-202ENSMUST00000118471 2272 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Tlr3Q99MB1 Fam199x-201ENSMUST00000047852 8299 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Tlr3Q99MB1 AA467197-202ENSMUST00000110512 751 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Tlr3Q99MB1 Surf1-201ENSMUST00000015934 1173 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Tlr3Q99MB1 Snrnp35-201ENSMUST00000031349 1115 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Tlr3Q99MB1 Sox6os-201ENSMUST00000032900 420 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Tlr3Q99MB1 Ly6h-202ENSMUST00000065417 985 ntAPPRIS ALT1 TSL 2 BASIC17.72■□□□□ 0.43
Tlr3Q99MB1 2310039H08Rik-201ENSMUST00000071430 773 ntAPPRIS P1 BASIC17.72■□□□□ 0.43
Tlr3Q99MB1 Rad51d-203ENSMUST00000092844 1228 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Tlr3Q99MB1 Agk-201ENSMUST00000031977 2531 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Tlr3Q99MB1 Git2-215ENSMUST00000178440 4944 ntTSL 5 BASIC17.72■□□□□ 0.43
Tlr3Q99MB1 Git2-201ENSMUST00000043283 4938 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Tlr3Q99MB1 Arfip1-202ENSMUST00000107687 1714 ntTSL 5 BASIC17.72■□□□□ 0.43
Tlr3Q99MB1 Lrig3-201ENSMUST00000074807 4016 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Retrieved 100 of 76,532 protein–RNA pairs in 23.5 ms