Protein–RNA interactions for Protein: Q99LF4

Rtcb, tRNA-splicing ligase RtcB homolog, mousemouse

Known RBP Predictions only

Length 505 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RtcbQ99LF4 Nrxn2-204ENSMUST00000113461 5505 ntAPPRIS ALT2 TSL 5 BASIC20.4■□□□□ 0.86
RtcbQ99LF4 Asap2-202ENSMUST00000064595 5678 ntAPPRIS P4 TSL 5 BASIC20.4■□□□□ 0.86
RtcbQ99LF4 Ptprf-201ENSMUST00000049074 7656 ntAPPRIS P1 TSL 5 BASIC20.4■□□□□ 0.86
RtcbQ99LF4 Eif3b-201ENSMUST00000100507 2945 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
RtcbQ99LF4 A130010J15Rik-201ENSMUST00000110831 2257 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
RtcbQ99LF4 Slc22a12-201ENSMUST00000113451 2213 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
RtcbQ99LF4 Rab11fip3-202ENSMUST00000120691 5103 ntAPPRIS ALT2 TSL 1 (best) BASIC20.4■□□□□ 0.86
RtcbQ99LF4 Gm3928-201ENSMUST00000121141 1307 ntBASIC20.4■□□□□ 0.86
RtcbQ99LF4 Hoxc4-202ENSMUST00000165375 2121 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
RtcbQ99LF4 Gm26718-201ENSMUST00000181048 1378 ntTSL 5 BASIC20.4■□□□□ 0.86
RtcbQ99LF4 Gm8349-201ENSMUST00000182720 1003 ntBASIC20.4■□□□□ 0.86
RtcbQ99LF4 Gm5837-201ENSMUST00000191844 1369 ntBASIC20.4■□□□□ 0.86
RtcbQ99LF4 Spi1-201ENSMUST00000002180 2034 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
RtcbQ99LF4 4921511I17Rik-201ENSMUST00000220545 1341 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
RtcbQ99LF4 Tial1-201ENSMUST00000033135 1580 ntAPPRIS ALT1 TSL 1 (best) BASIC20.4■□□□□ 0.86
RtcbQ99LF4 Tnfsf14-201ENSMUST00000005976 1859 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
RtcbQ99LF4 Upf1-201ENSMUST00000075666 4618 ntAPPRIS P2 TSL 1 (best) BASIC20.4■□□□□ 0.86
RtcbQ99LF4 Itgb5-202ENSMUST00000115028 3090 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
RtcbQ99LF4 P2ry1-203ENSMUST00000193943 2203 ntAPPRIS P1 BASIC20.39■□□□□ 0.86
RtcbQ99LF4 Ric3-202ENSMUST00000120876 1633 ntAPPRIS ALT1 TSL 1 (best) BASIC20.39■□□□□ 0.86
RtcbQ99LF4 Kptn-201ENSMUST00000006178 1630 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
RtcbQ99LF4 Gm37194-201ENSMUST00000193092 3031 ntBASIC20.39■□□□□ 0.85
RtcbQ99LF4 Msantd3-202ENSMUST00000064807 1378 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
RtcbQ99LF4 Gm7063-201ENSMUST00000186840 981 ntBASIC20.39■□□□□ 0.85
RtcbQ99LF4 AC084391.1-201ENSMUST00000200651 141 ntBASIC20.39■□□□□ 0.85
RtcbQ99LF4 Gm45208-202ENSMUST00000208156 1153 ntAPPRIS P1 TSL 5 BASIC20.39■□□□□ 0.85
RtcbQ99LF4 Gm31545-201ENSMUST00000209358 1219 ntTSL 5 BASIC20.39■□□□□ 0.85
RtcbQ99LF4 Wnt10a-201ENSMUST00000006718 2468 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
RtcbQ99LF4 AU022751-202ENSMUST00000117544 2201 ntAPPRIS P4 BASIC20.39■□□□□ 0.85
RtcbQ99LF4 Hgsnat-201ENSMUST00000037609 2694 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
RtcbQ99LF4 Cacng4-201ENSMUST00000021066 3500 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
RtcbQ99LF4 Pofut1-204ENSMUST00000109794 1688 ntTSL 5 BASIC20.38■□□□□ 0.85
RtcbQ99LF4 Exoc3l2-202ENSMUST00000137613 4016 ntAPPRIS P1 TSL 5 BASIC20.38■□□□□ 0.85
RtcbQ99LF4 Nectin3-201ENSMUST00000023334 3062 ntAPPRIS P4 TSL 1 (best) BASIC20.38■□□□□ 0.85
RtcbQ99LF4 Apba3-201ENSMUST00000057798 2106 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
RtcbQ99LF4 Trib3-201ENSMUST00000040312 2026 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
RtcbQ99LF4 Echdc2-201ENSMUST00000052999 1307 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
RtcbQ99LF4 Klk6-202ENSMUST00000107967 1172 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
RtcbQ99LF4 Med11-202ENSMUST00000151013 445 ntTSL 2 BASIC20.38■□□□□ 0.85
RtcbQ99LF4 Gm25911-201ENSMUST00000157621 56 ntBASIC20.38■□□□□ 0.85
RtcbQ99LF4 Gm9172-201ENSMUST00000212092 954 ntBASIC20.38■□□□□ 0.85
RtcbQ99LF4 Ndufb6-201ENSMUST00000095128 659 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
RtcbQ99LF4 Tmem185a-201ENSMUST00000101506 2429 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
RtcbQ99LF4 Mff-211ENSMUST00000161648 1715 ntTSL 5 BASIC20.38■□□□□ 0.85
RtcbQ99LF4 Ada-201ENSMUST00000017841 1688 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
RtcbQ99LF4 Anks1b-219ENSMUST00000182600 1697 ntTSL 5 BASIC20.38■□□□□ 0.85
RtcbQ99LF4 Gm36447-201ENSMUST00000201101 1978 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
RtcbQ99LF4 Lrfn4-202ENSMUST00000113822 2918 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
RtcbQ99LF4 Cdca7-201ENSMUST00000102691 2424 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
RtcbQ99LF4 Pqlc2-205ENSMUST00000172747 1405 ntAPPRIS P2 TSL 5 BASIC20.37■□□□□ 0.85
RtcbQ99LF4 Irgq-201ENSMUST00000049020 6083 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
RtcbQ99LF4 Cope-201ENSMUST00000066469 1300 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
RtcbQ99LF4 Epo-202ENSMUST00000111038 855 ntAPPRIS P3 TSL 5 BASIC20.37■□□□□ 0.85
RtcbQ99LF4 Gm5091-201ENSMUST00000181658 1179 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
RtcbQ99LF4 Gm20646-202ENSMUST00000199521 660 ntTSL 3 BASIC20.37■□□□□ 0.85
RtcbQ99LF4 Fam71e1-204ENSMUST00000205422 366 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
RtcbQ99LF4 Ndufaf2-202ENSMUST00000223734 556 ntBASIC20.37■□□□□ 0.85
RtcbQ99LF4 Gde1-201ENSMUST00000038791 1582 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
RtcbQ99LF4 Smox-204ENSMUST00000110181 2299 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
RtcbQ99LF4 Ebf3-201ENSMUST00000033378 4838 ntAPPRIS P3 TSL 1 (best) BASIC20.37■□□□□ 0.85
RtcbQ99LF4 Abhd5-202ENSMUST00000111497 2576 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
RtcbQ99LF4 Prss56-201ENSMUST00000044533 2180 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
RtcbQ99LF4 Ddx19a-201ENSMUST00000040416 2547 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
RtcbQ99LF4 Slc35b2-202ENSMUST00000223987 1766 ntBASIC20.36■□□□□ 0.85
RtcbQ99LF4 Ahcyl2-202ENSMUST00000102995 5155 ntAPPRIS ALT1 TSL 5 BASIC20.36■□□□□ 0.85
RtcbQ99LF4 Paqr7-201ENSMUST00000081525 2351 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
RtcbQ99LF4 Med18-201ENSMUST00000102567 1675 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
RtcbQ99LF4 Tbc1d9-202ENSMUST00000093393 5334 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
RtcbQ99LF4 1700029H14Rik-203ENSMUST00000134023 1319 ntAPPRIS ALT2 TSL 1 (best) BASIC20.36■□□□□ 0.85
RtcbQ99LF4 Lgals3-203ENSMUST00000146468 1072 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
RtcbQ99LF4 Gm26308-201ENSMUST00000157768 69 ntBASIC20.36■□□□□ 0.85
RtcbQ99LF4 Egfl7-216ENSMUST00000174211 1163 ntAPPRIS P4 TSL 1 (best) BASIC20.36■□□□□ 0.85
RtcbQ99LF4 Gm10576-201ENSMUST00000191927 825 ntBASIC20.36■□□□□ 0.85
RtcbQ99LF4 AC151286.1-201ENSMUST00000198489 145 ntBASIC20.36■□□□□ 0.85
RtcbQ99LF4 AC110091.2-202ENSMUST00000216718 1148 ntTSL 5 BASIC20.36■□□□□ 0.85
RtcbQ99LF4 Mrpl46-201ENSMUST00000032841 1134 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
RtcbQ99LF4 Aqp12-201ENSMUST00000059676 1088 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
RtcbQ99LF4 Gm10175-201ENSMUST00000086013 645 ntBASIC20.36■□□□□ 0.85
RtcbQ99LF4 Foxo3-204ENSMUST00000175881 2535 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
RtcbQ99LF4 Zfp697-202ENSMUST00000178372 4703 ntAPPRIS P1 TSL 5 BASIC20.36■□□□□ 0.85
RtcbQ99LF4 Fam109a-201ENSMUST00000056654 2368 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
RtcbQ99LF4 Bcor-206ENSMUST00000124033 6785 ntAPPRIS ALT2 TSL 1 (best) BASIC20.36■□□□□ 0.85
RtcbQ99LF4 Spg7-209ENSMUST00000149248 2896 ntAPPRIS P2 TSL 1 (best) BASIC20.36■□□□□ 0.85
RtcbQ99LF4 Odf2-211ENSMUST00000113767 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC20.35■□□□□ 0.85
RtcbQ99LF4 Gm16499-203ENSMUST00000204633 2177 ntBASIC20.35■□□□□ 0.85
RtcbQ99LF4 Tmem245-202ENSMUST00000107609 2643 ntAPPRIS P2 TSL 5 BASIC20.35■□□□□ 0.85
RtcbQ99LF4 Rgmb-201ENSMUST00000170578 2633 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
RtcbQ99LF4 Clcn2-202ENSMUST00000120099 2812 ntAPPRIS ALT2 TSL 5 BASIC20.35■□□□□ 0.85
RtcbQ99LF4 Egln1-201ENSMUST00000034469 3594 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
RtcbQ99LF4 Gm45231-201ENSMUST00000208629 1064 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
RtcbQ99LF4 AC107711.5-202ENSMUST00000226429 702 ntBASIC20.35■□□□□ 0.85
RtcbQ99LF4 Sumo1-201ENSMUST00000091374 1215 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
RtcbQ99LF4 Adck1-204ENSMUST00000222695 2253 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
RtcbQ99LF4 Dusp14-205ENSMUST00000164891 1454 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
RtcbQ99LF4 Gm13283-201ENSMUST00000191112 1463 ntAPPRIS P1 BASIC20.35■□□□□ 0.85
RtcbQ99LF4 Tnfrsf13c-201ENSMUST00000089161 1906 ntAPPRIS P2 TSL 1 (best) BASIC20.35■□□□□ 0.85
RtcbQ99LF4 Psmc4-201ENSMUST00000032824 1440 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
RtcbQ99LF4 Ttc39a-201ENSMUST00000064129 2356 ntAPPRIS P3 TSL 1 (best) BASIC20.35■□□□□ 0.85
RtcbQ99LF4 Trpc4ap-202ENSMUST00000103140 3091 ntAPPRIS P3 TSL 1 (best) BASIC20.35■□□□□ 0.85
RtcbQ99LF4 Shisa7-203ENSMUST00000119433 3481 ntAPPRIS P2 TSL 1 (best) BASIC20.35■□□□□ 0.85
Retrieved 100 of 76,532 protein–RNA pairs in 23.5 ms