Protein–RNA interactions for Protein: Q99J36

Thumpd1, THUMP domain-containing protein 1, mousemouse

Known RBP Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Thumpd1Q99J36 Bpifb3-201ENSMUST00000088950 1821 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Thumpd1Q99J36 Fam96b-201ENSMUST00000093234 639 ntTSL 5 BASIC14.79□□□□□ -0.04
Thumpd1Q99J36 Syngr1-202ENSMUST00000009728 819 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
Thumpd1Q99J36 Tapt1-201ENSMUST00000055128 3513 ntAPPRIS P1 TSL 5 BASIC14.79□□□□□ -0.04
Thumpd1Q99J36 Pex12-205ENSMUST00000175741 2337 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Thumpd1Q99J36 Trmt2a-202ENSMUST00000100099 2235 ntAPPRIS P5 TSL 1 (best) BASIC14.78□□□□□ -0.04
Thumpd1Q99J36 Col11a2-201ENSMUST00000087497 6048 ntAPPRIS P2 TSL 2 BASIC14.78□□□□□ -0.04
Thumpd1Q99J36 Gnb3-201ENSMUST00000024206 1846 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Thumpd1Q99J36 Tra2a-201ENSMUST00000031841 1799 ntAPPRIS P3 TSL 5 BASIC14.78□□□□□ -0.04
Thumpd1Q99J36 Fubp3-202ENSMUST00000113482 3268 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Thumpd1Q99J36 Pigu-201ENSMUST00000077626 1636 ntAPPRIS P2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Thumpd1Q99J36 Nes-203ENSMUST00000160694 5958 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Thumpd1Q99J36 Gm14317-201ENSMUST00000151754 1464 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Thumpd1Q99J36 Plaa-201ENSMUST00000107107 2784 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Thumpd1Q99J36 Lrg1-201ENSMUST00000041357 1351 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Thumpd1Q99J36 Gucd1-211ENSMUST00000219774 806 ntTSL 3 BASIC14.78□□□□□ -0.04
Thumpd1Q99J36 AC175538.2-202ENSMUST00000224997 1057 ntAPPRIS P1 BASIC14.78□□□□□ -0.04
Thumpd1Q99J36 4930412O13Rik-201ENSMUST00000026889 1187 ntAPPRIS P5 TSL 1 (best) BASIC14.78□□□□□ -0.04
Thumpd1Q99J36 Rtl8b-201ENSMUST00000088778 1232 ntAPPRIS P1 BASIC14.78□□□□□ -0.04
Thumpd1Q99J36 Celf3-208ENSMUST00000198316 2505 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Thumpd1Q99J36 Naa35-201ENSMUST00000022038 3793 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Thumpd1Q99J36 Coq8b-201ENSMUST00000003860 2181 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Thumpd1Q99J36 1700034J05Rik-202ENSMUST00000111622 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Thumpd1Q99J36 Perp-201ENSMUST00000019998 1952 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Thumpd1Q99J36 Phax-201ENSMUST00000008445 1942 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
Thumpd1Q99J36 Wipf3-204ENSMUST00000132855 4516 ntAPPRIS P4 TSL 5 BASIC14.78□□□□□ -0.04
Thumpd1Q99J36 Otp-201ENSMUST00000022195 2656 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Thumpd1Q99J36 Trim28-201ENSMUST00000005705 3245 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Thumpd1Q99J36 AU022751-202ENSMUST00000117544 2201 ntAPPRIS P4 BASIC14.77□□□□□ -0.04
Thumpd1Q99J36 Dusp14-205ENSMUST00000164891 1454 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Thumpd1Q99J36 Pkp2-202ENSMUST00000161342 2931 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
Thumpd1Q99J36 Gm43859-201ENSMUST00000200075 1412 ntBASIC14.77□□□□□ -0.04
Thumpd1Q99J36 Fam57a-201ENSMUST00000094014 2130 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Thumpd1Q99J36 Esrp1-202ENSMUST00000108310 2781 ntAPPRIS P1 TSL 5 BASIC14.77□□□□□ -0.04
Thumpd1Q99J36 Degs1-201ENSMUST00000035295 2048 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Thumpd1Q99J36 Syn1-201ENSMUST00000081893 3209 ntAPPRIS P4 TSL 5 BASIC14.77□□□□□ -0.04
Thumpd1Q99J36 Tnfaip8l2-201ENSMUST00000013851 1122 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Thumpd1Q99J36 Fev-202ENSMUST00000159232 928 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
Thumpd1Q99J36 Cox14-201ENSMUST00000023761 723 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Thumpd1Q99J36 Men1-205ENSMUST00000113501 2508 ntTSL 5 BASIC14.77□□□□□ -0.05
Thumpd1Q99J36 1190002N15Rik-201ENSMUST00000113028 3950 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Thumpd1Q99J36 Rgs6-206ENSMUST00000186309 1693 ntAPPRIS P4 TSL 5 BASIC14.77□□□□□ -0.05
Thumpd1Q99J36 Higd1a-201ENSMUST00000060251 2232 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Thumpd1Q99J36 Sox18-201ENSMUST00000054491 1620 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Thumpd1Q99J36 A4galt-202ENSMUST00000164614 2128 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Thumpd1Q99J36 K230015D01Rik-201ENSMUST00000211969 1516 ntBASIC14.76□□□□□ -0.05
Thumpd1Q99J36 Ppp1r36-201ENSMUST00000063977 1515 ntAPPRIS P1 TSL 5 BASIC14.76□□□□□ -0.05
Thumpd1Q99J36 Samd4-211ENSMUST00000228404 3039 ntAPPRIS ALT2 BASIC14.76□□□□□ -0.05
Thumpd1Q99J36 Fignl2-202ENSMUST00000213610 4462 ntAPPRIS P1 TSL 5 BASIC14.76□□□□□ -0.05
Thumpd1Q99J36 Atxn7l3-201ENSMUST00000073234 3688 ntAPPRIS ALT1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Thumpd1Q99J36 Ctla2a-201ENSMUST00000021880 1373 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Thumpd1Q99J36 Prss33-201ENSMUST00000059906 1360 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Thumpd1Q99J36 Hectd3-201ENSMUST00000050067 4583 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Thumpd1Q99J36 C030014I23Rik-201ENSMUST00000080911 1810 ntBASIC14.76□□□□□ -0.05
Thumpd1Q99J36 Nipa2-201ENSMUST00000032635 3197 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Thumpd1Q99J36 Rd3-203ENSMUST00000181512 1760 ntTSL 5 BASIC14.76□□□□□ -0.05
Thumpd1Q99J36 Mcm9-201ENSMUST00000075540 4882 ntAPPRIS P1 TSL 2 BASIC14.76□□□□□ -0.05
Thumpd1Q99J36 Itga5-201ENSMUST00000023128 4382 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Thumpd1Q99J36 Tpm1-204ENSMUST00000113684 887 ntTSL 5 BASIC14.76□□□□□ -0.05
Thumpd1Q99J36 Gm20635-201ENSMUST00000176473 1287 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Thumpd1Q99J36 2310001K24Rik-202ENSMUST00000186760 740 ntTSL 2 BASIC14.76□□□□□ -0.05
Thumpd1Q99J36 Tspan2-203ENSMUST00000196611 682 ntTSL 5 BASIC14.76□□□□□ -0.05
Thumpd1Q99J36 Gng5-201ENSMUST00000090031 593 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Thumpd1Q99J36 Gm6093-201ENSMUST00000221792 1623 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Thumpd1Q99J36 Krt28-201ENSMUST00000006963 1624 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Thumpd1Q99J36 Sppl3-201ENSMUST00000031530 3204 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Thumpd1Q99J36 Mapk8ip3-201ENSMUST00000088345 5543 ntAPPRIS P3 TSL 1 (best) BASIC14.76□□□□□ -0.05
Thumpd1Q99J36 Dand5-201ENSMUST00000065539 1584 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Thumpd1Q99J36 Rnf170-209ENSMUST00000209300 1881 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Thumpd1Q99J36 Klf7-201ENSMUST00000055001 1477 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Thumpd1Q99J36 Dok5-201ENSMUST00000029075 1768 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Thumpd1Q99J36 9530085L11Rik-201ENSMUST00000203963 2115 ntBASIC14.75□□□□□ -0.05
Thumpd1Q99J36 Fars2-201ENSMUST00000021857 2125 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Thumpd1Q99J36 Zdhhc18-201ENSMUST00000084238 4580 ntAPPRIS P1 TSL 2 BASIC14.75□□□□□ -0.05
Thumpd1Q99J36 Ankrd50-202ENSMUST00000120875 4945 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Thumpd1Q99J36 Cacna1i-202ENSMUST00000160424 9781 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Thumpd1Q99J36 Pqlc1-205ENSMUST00000131780 2080 ntAPPRIS P3 TSL 1 (best) BASIC14.75□□□□□ -0.05
Thumpd1Q99J36 Adrb3-202ENSMUST00000117565 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC14.75□□□□□ -0.05
Thumpd1Q99J36 Pias4-201ENSMUST00000005064 2571 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Thumpd1Q99J36 Naa10-205ENSMUST00000114390 797 ntTSL 5 BASIC14.75□□□□□ -0.05
Thumpd1Q99J36 Gm9731-201ENSMUST00000209480 747 ntBASIC14.75□□□□□ -0.05
Thumpd1Q99J36 Tmem205-201ENSMUST00000046831 785 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Thumpd1Q99J36 Alk-201ENSMUST00000086639 4866 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Thumpd1Q99J36 G3bp2-202ENSMUST00000164378 3026 ntAPPRIS P3 TSL 1 (best) BASIC14.75□□□□□ -0.05
Thumpd1Q99J36 Srpr-201ENSMUST00000034541 2993 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Thumpd1Q99J36 Ndufaf3-201ENSMUST00000074208 1487 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Thumpd1Q99J36 Gm26762-201ENSMUST00000180864 5284 ntTSL 5 BASIC14.75□□□□□ -0.05
Thumpd1Q99J36 Nfat5-211ENSMUST00000151114 4982 ntAPPRIS P3 TSL 1 (best) BASIC14.75□□□□□ -0.05
Thumpd1Q99J36 Ptgis-202ENSMUST00000088041 1711 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
Thumpd1Q99J36 Oxr1-206ENSMUST00000170127 4251 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
Thumpd1Q99J36 Klf5-201ENSMUST00000005279 3352 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Thumpd1Q99J36 Fbxo7-203ENSMUST00000120344 1655 ntAPPRIS ALT2 TSL 1 (best) BASIC14.74□□□□□ -0.05
Thumpd1Q99J36 Hist1h2bh-201ENSMUST00000224359 1679 ntAPPRIS P1 BASIC14.74□□□□□ -0.05
Thumpd1Q99J36 Mapt-202ENSMUST00000106988 2202 ntAPPRIS ALT2 TSL 5 BASIC14.74□□□□□ -0.05
Thumpd1Q99J36 Cspp1-203ENSMUST00000118263 2162 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Thumpd1Q99J36 P2rx2-201ENSMUST00000058016 1895 ntAPPRIS ALT2 TSL 1 (best) BASIC14.74□□□□□ -0.05
Thumpd1Q99J36 Tal1-201ENSMUST00000030489 4213 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Thumpd1Q99J36 Tmem229b-206ENSMUST00000174697 3697 ntAPPRIS P1 TSL 5 BASIC14.74□□□□□ -0.05
Thumpd1Q99J36 Pacsin1-202ENSMUST00000097360 1800 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Thumpd1Q99J36 Usp43-202ENSMUST00000108677 4447 ntAPPRIS ALT2 TSL 1 (best) BASIC14.74□□□□□ -0.05
Retrieved 100 of 76,532 protein–RNA pairs in 25 ms