Protein–RNA interactions for Protein: Q91XY5

Pcdhga3, Protocadherin gamma A3, mousemouse

Predictions only

Length 928 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhga3Q91XY5 Tmem47-203ENSMUST00000171953 1801 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Pcdhga3Q91XY5 March3-202ENSMUST00000102912 1754 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
Pcdhga3Q91XY5 2610301B20Rik-201ENSMUST00000080517 2116 ntAPPRIS P2 TSL 1 (best) BASIC14.75□□□□□ -0.05
Pcdhga3Q91XY5 Lrp12-202ENSMUST00000110305 4244 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
Pcdhga3Q91XY5 Zbtb2-201ENSMUST00000100077 3086 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Pcdhga3Q91XY5 Rrp15-201ENSMUST00000001339 1321 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Pcdhga3Q91XY5 Ctsf-201ENSMUST00000119694 1975 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Pcdhga3Q91XY5 A930003O13Rik-203ENSMUST00000199056 1955 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
Pcdhga3Q91XY5 Cutc-202ENSMUST00000112047 1233 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Pcdhga3Q91XY5 Gm14968-201ENSMUST00000155528 769 ntTSL 3 BASIC14.75□□□□□ -0.05
Pcdhga3Q91XY5 Khdc3-204ENSMUST00000173734 1228 ntAPPRIS ALT2 TSL 1 (best) BASIC14.75□□□□□ -0.05
Pcdhga3Q91XY5 AL672049.1-201ENSMUST00000197943 91 ntBASIC14.75□□□□□ -0.05
Pcdhga3Q91XY5 Ube2a-208ENSMUST00000202812 719 ntTSL 2 BASIC14.75□□□□□ -0.05
Pcdhga3Q91XY5 Cmtm7-201ENSMUST00000035009 993 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Pcdhga3Q91XY5 Grhpr-201ENSMUST00000045078 1280 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Pcdhga3Q91XY5 Relb-201ENSMUST00000049912 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC14.75□□□□□ -0.05
Pcdhga3Q91XY5 Chka-202ENSMUST00000072055 2549 ntAPPRIS P3 TSL 1 (best) BASIC14.75□□□□□ -0.05
Pcdhga3Q91XY5 Scrn2-201ENSMUST00000021249 1530 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Pcdhga3Q91XY5 Rarg-202ENSMUST00000063339 2718 ntAPPRIS ALT2 TSL 1 (best) BASIC14.75□□□□□ -0.05
Pcdhga3Q91XY5 Ccdc126-201ENSMUST00000055559 2351 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Pcdhga3Q91XY5 Itpkc-201ENSMUST00000003850 3247 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Pcdhga3Q91XY5 Ldb1-205ENSMUST00000137771 2014 ntTSL 5 BASIC14.75□□□□□ -0.05
Pcdhga3Q91XY5 Nfkbid-201ENSMUST00000046177 2039 ntAPPRIS P2 TSL 1 (best) BASIC14.75□□□□□ -0.05
Pcdhga3Q91XY5 Chd3-201ENSMUST00000092971 6066 ntAPPRIS ALT2 TSL 5 BASIC14.75□□□□□ -0.05
Pcdhga3Q91XY5 Dhcr24-201ENSMUST00000047973 4028 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Pcdhga3Q91XY5 Doc2g-201ENSMUST00000025806 1446 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Pcdhga3Q91XY5 Mmp23-201ENSMUST00000030937 1434 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Pcdhga3Q91XY5 Arid3b-202ENSMUST00000098686 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC14.74□□□□□ -0.05
Pcdhga3Q91XY5 Pde1c-203ENSMUST00000164037 3068 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Pcdhga3Q91XY5 Gm37166-201ENSMUST00000195473 2474 ntBASIC14.74□□□□□ -0.05
Pcdhga3Q91XY5 Yipf2-204ENSMUST00000213809 1883 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Pcdhga3Q91XY5 Flt1-202ENSMUST00000031653 6895 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Pcdhga3Q91XY5 Prmt2-202ENSMUST00000099571 2052 ntAPPRIS P3 TSL 1 (best) BASIC14.74□□□□□ -0.05
Pcdhga3Q91XY5 Btaf1-201ENSMUST00000099494 7204 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Pcdhga3Q91XY5 Gm16835-201ENSMUST00000140488 2809 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Pcdhga3Q91XY5 Slc25a41-202ENSMUST00000169012 1172 ntAPPRIS ALT2 TSL 1 (best) BASIC14.74□□□□□ -0.05
Pcdhga3Q91XY5 Pih1d2-201ENSMUST00000000171 1256 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Pcdhga3Q91XY5 Btg1-202ENSMUST00000218953 668 ntTSL 2 BASIC14.74□□□□□ -0.05
Pcdhga3Q91XY5 Cmc1-201ENSMUST00000044220 1169 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Pcdhga3Q91XY5 Lgals7-201ENSMUST00000081457 754 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Pcdhga3Q91XY5 Cadps2-205ENSMUST00000115358 4848 ntAPPRIS ALT2 TSL 5 BASIC14.74□□□□□ -0.05
Pcdhga3Q91XY5 Sfrp4-201ENSMUST00000002883 1764 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Pcdhga3Q91XY5 Zpr1-206ENSMUST00000156440 2984 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Pcdhga3Q91XY5 Gm43598-201ENSMUST00000202482 2479 ntBASIC14.74□□□□□ -0.05
Pcdhga3Q91XY5 Mta3-203ENSMUST00000112350 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC14.74□□□□□ -0.05
Pcdhga3Q91XY5 Ahctf1-201ENSMUST00000027768 8506 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Pcdhga3Q91XY5 App-202ENSMUST00000226232 3120 ntAPPRIS ALT2 BASIC14.74□□□□□ -0.05
Pcdhga3Q91XY5 Bri3bp-201ENSMUST00000049040 6473 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Pcdhga3Q91XY5 Ubn1-201ENSMUST00000052449 6455 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Pcdhga3Q91XY5 Tgfbr2-202ENSMUST00000061101 8092 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Pcdhga3Q91XY5 Ell2-201ENSMUST00000001583 4382 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Pcdhga3Q91XY5 Large1-204ENSMUST00000212459 4746 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Pcdhga3Q91XY5 Fam160b1-201ENSMUST00000036407 5630 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Pcdhga3Q91XY5 Plbd2-201ENSMUST00000031597 4208 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Pcdhga3Q91XY5 Gm26592-201ENSMUST00000180870 1730 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Pcdhga3Q91XY5 Cpne1-217ENSMUST00000184265 871 ntTSL 5 BASIC14.73□□□□□ -0.05
Pcdhga3Q91XY5 Gm28876-201ENSMUST00000188137 703 ntTSL 3 BASIC14.73□□□□□ -0.05
Pcdhga3Q91XY5 Gm9484-201ENSMUST00000195892 1159 ntBASIC14.73□□□□□ -0.05
Pcdhga3Q91XY5 Gm43353-201ENSMUST00000199224 1295 ntBASIC14.73□□□□□ -0.05
Pcdhga3Q91XY5 Gm42884-202ENSMUST00000202523 423 ntTSL 3 BASIC14.73□□□□□ -0.05
Pcdhga3Q91XY5 Gm17949-201ENSMUST00000210548 1179 ntAPPRIS P1 TSL 5 BASIC14.73□□□□□ -0.05
Pcdhga3Q91XY5 Gm30025-201ENSMUST00000218555 728 ntBASIC14.73□□□□□ -0.05
Pcdhga3Q91XY5 Pigf-201ENSMUST00000024957 988 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Pcdhga3Q91XY5 Abhd5-204ENSMUST00000156520 3157 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Pcdhga3Q91XY5 Tm9sf2-203ENSMUST00000171318 1494 ntTSL 5 BASIC14.73□□□□□ -0.05
Pcdhga3Q91XY5 Prss53-202ENSMUST00000205300 1662 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Pcdhga3Q91XY5 Eefsec-201ENSMUST00000165242 2679 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Pcdhga3Q91XY5 Pld2-203ENSMUST00000108557 3655 ntAPPRIS ALT2 TSL 1 (best) BASIC14.73□□□□□ -0.05
Pcdhga3Q91XY5 Spout1-201ENSMUST00000100220 1805 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Pcdhga3Q91XY5 Kdelr2-201ENSMUST00000110731 1829 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Pcdhga3Q91XY5 Rhof-201ENSMUST00000031401 2208 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Pcdhga3Q91XY5 Rara-202ENSMUST00000107473 3238 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Pcdhga3Q91XY5 Rab6a-201ENSMUST00000032946 3214 ntAPPRIS P3 TSL 1 (best) BASIC14.73□□□□□ -0.05
Pcdhga3Q91XY5 Trim28-201ENSMUST00000005705 3245 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Pcdhga3Q91XY5 Fhl1-203ENSMUST00000114769 2770 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Pcdhga3Q91XY5 Trim14-202ENSMUST00000102924 1582 ntTSL 2 BASIC14.73□□□□□ -0.05
Pcdhga3Q91XY5 4933428P19Rik-201ENSMUST00000199616 1376 ntBASIC14.73□□□□□ -0.05
Pcdhga3Q91XY5 Smad3-201ENSMUST00000034973 5090 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Pcdhga3Q91XY5 Fignl2-202ENSMUST00000213610 4462 ntAPPRIS P1 TSL 5 BASIC14.72□□□□□ -0.05
Pcdhga3Q91XY5 Rundc3b-201ENSMUST00000047485 3677 ntAPPRIS P3 TSL 1 (best) BASIC14.72□□□□□ -0.05
Pcdhga3Q91XY5 Simc1-201ENSMUST00000118072 2116 ntAPPRIS ALT2 TSL 5 BASIC14.72□□□□□ -0.05
Pcdhga3Q91XY5 Evpl-201ENSMUST00000037007 6384 ntAPPRIS P1 TSL 2 BASIC14.72□□□□□ -0.05
Pcdhga3Q91XY5 Aurka-202ENSMUST00000109139 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC14.72□□□□□ -0.05
Pcdhga3Q91XY5 Aurka-201ENSMUST00000028997 1905 ntAPPRIS P3 TSL 1 (best) BASIC14.72□□□□□ -0.05
Pcdhga3Q91XY5 Tnfrsf13c-201ENSMUST00000089161 1906 ntAPPRIS P2 TSL 1 (best) BASIC14.72□□□□□ -0.05
Pcdhga3Q91XY5 Txndc11-201ENSMUST00000038424 3095 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Pcdhga3Q91XY5 Tmem163-203ENSMUST00000160616 2657 ntAPPRIS P1 TSL 2 BASIC14.72□□□□□ -0.05
Pcdhga3Q91XY5 Bfsp2-201ENSMUST00000124310 1662 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Pcdhga3Q91XY5 Tox2-205ENSMUST00000165937 1675 ntAPPRIS P2 TSL 5 BASIC14.72□□□□□ -0.05
Pcdhga3Q91XY5 Gm5414-201ENSMUST00000062879 1659 ntAPPRIS P1 TSL 2 BASIC14.72□□□□□ -0.05
Pcdhga3Q91XY5 Dnaaf3-201ENSMUST00000094897 2224 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Pcdhga3Q91XY5 Camk2n1-201ENSMUST00000050918 4444 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Pcdhga3Q91XY5 Gm1673-203ENSMUST00000114383 511 ntAPPRIS ALT2 TSL 1 (best) BASIC14.72□□□□□ -0.05
Pcdhga3Q91XY5 Gssos2-201ENSMUST00000130859 727 ntTSL 3 BASIC14.72□□□□□ -0.05
Pcdhga3Q91XY5 2210408F21Rik-204ENSMUST00000136571 478 ntTSL 3 BASIC14.72□□□□□ -0.05
Pcdhga3Q91XY5 Gm18958-201ENSMUST00000174258 762 ntBASIC14.72□□□□□ -0.05
Pcdhga3Q91XY5 Fau-203ENSMUST00000179142 736 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Pcdhga3Q91XY5 1700025A08Rik-201ENSMUST00000200753 609 ntBASIC14.72□□□□□ -0.05
Pcdhga3Q91XY5 Rprml-201ENSMUST00000057870 1010 ntAPPRIS P1 BASIC14.72□□□□□ -0.05
Pcdhga3Q91XY5 Crk-201ENSMUST00000017920 3642 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Retrieved 100 of 76,532 protein–RNA pairs in 19.9 ms