Protein–RNA interactions for Protein: Q8VI40

Trim60, Tripartite motif-containing protein 60, mousemouse

Predictions only

Length 466 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim60Q8VI40 Gm12359-201ENSMUST00000139017 1399 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Trim60Q8VI40 Ubr2-201ENSMUST00000113335 5691 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Trim60Q8VI40 Capn10-201ENSMUST00000027488 2902 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Trim60Q8VI40 Spon1-202ENSMUST00000084696 5201 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Trim60Q8VI40 Pacs1-201ENSMUST00000025786 4339 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Trim60Q8VI40 Zdhhc2-201ENSMUST00000049389 3381 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Trim60Q8VI40 L3hypdh-201ENSMUST00000019862 1831 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Trim60Q8VI40 Mxd4-201ENSMUST00000042701 3872 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Trim60Q8VI40 Prkcb-201ENSMUST00000064921 2557 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Trim60Q8VI40 Cdk9-202ENSMUST00000120105 1565 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Trim60Q8VI40 Zkscan6-202ENSMUST00000071465 2270 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Trim60Q8VI40 Ado-201ENSMUST00000075686 4445 ntAPPRIS P1 BASIC17.12■□□□□ 0.33
Trim60Q8VI40 C2cd2-201ENSMUST00000170757 6555 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Trim60Q8VI40 Atox1-201ENSMUST00000108857 541 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Trim60Q8VI40 Tsfm-202ENSMUST00000120547 1271 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Trim60Q8VI40 Tnfaip8-208ENSMUST00000148989 1002 ntAPPRIS P1 TSL 2 BASIC17.12■□□□□ 0.33
Trim60Q8VI40 Zfas1-205ENSMUST00000189909 738 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Trim60Q8VI40 Gm7791-201ENSMUST00000219066 539 ntBASIC17.12■□□□□ 0.33
Trim60Q8VI40 Aim2-204ENSMUST00000166137 2079 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
Trim60Q8VI40 Slc6a1-204ENSMUST00000204074 1740 ntTSL 5 BASIC17.12■□□□□ 0.33
Trim60Q8VI40 Dhcr24-201ENSMUST00000047973 4028 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Trim60Q8VI40 Evc-202ENSMUST00000114148 2119 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Trim60Q8VI40 Agk-201ENSMUST00000031977 2531 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Trim60Q8VI40 Dmgdh-201ENSMUST00000048001 2992 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Trim60Q8VI40 Dcdc2c-206ENSMUST00000221349 2209 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
Trim60Q8VI40 Gpd1l-201ENSMUST00000084853 1436 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Trim60Q8VI40 Klhdc8b-201ENSMUST00000035232 1897 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Trim60Q8VI40 Mesp2-201ENSMUST00000107394 1944 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Trim60Q8VI40 Tuba1c-201ENSMUST00000058914 1977 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Trim60Q8VI40 Prr14-201ENSMUST00000033095 2402 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Trim60Q8VI40 Megf11-210ENSMUST00000164113 6018 ntTSL 5 BASIC17.11■□□□□ 0.33
Trim60Q8VI40 Csnk1e-201ENSMUST00000117786 2694 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Trim60Q8VI40 Adss-201ENSMUST00000016105 2771 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Trim60Q8VI40 Layn-201ENSMUST00000098782 1786 ntAPPRIS P2 TSL 5 BASIC17.11■□□□□ 0.33
Trim60Q8VI40 Zfp467-209ENSMUST00000114566 543 ntTSL 3 BASIC17.11■□□□□ 0.33
Trim60Q8VI40 Sp3os-201ENSMUST00000123087 583 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Trim60Q8VI40 Steap1-201ENSMUST00000015796 1230 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Trim60Q8VI40 Gm17182-201ENSMUST00000163795 860 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Trim60Q8VI40 Anapc13-203ENSMUST00000188398 727 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
Trim60Q8VI40 Pusl1-201ENSMUST00000097737 1243 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
Trim60Q8VI40 Gm45736-201ENSMUST00000210592 1352 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
Trim60Q8VI40 AC069562.2-201ENSMUST00000224644 2146 ntBASIC17.11■□□□□ 0.33
Trim60Q8VI40 Gm16861-201ENSMUST00000181498 1647 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Trim60Q8VI40 Map6-207ENSMUST00000208924 2906 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Trim60Q8VI40 Sox18-201ENSMUST00000054491 1620 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Trim60Q8VI40 Il3ra-203ENSMUST00000224163 2315 ntAPPRIS P2 BASIC17.1■□□□□ 0.33
Trim60Q8VI40 Rgs6-206ENSMUST00000186309 1693 ntAPPRIS P4 TSL 5 BASIC17.1■□□□□ 0.33
Trim60Q8VI40 Gm43072-201ENSMUST00000200283 1671 ntBASIC17.1■□□□□ 0.33
Trim60Q8VI40 Cgn-204ENSMUST00000155485 2361 ntTSL 2 BASIC17.1■□□□□ 0.33
Trim60Q8VI40 Gcat-202ENSMUST00000171999 1763 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Trim60Q8VI40 Hnrnpl-202ENSMUST00000172529 1898 ntTSL 5 BASIC17.1■□□□□ 0.33
Trim60Q8VI40 Tmem56-203ENSMUST00000128909 6696 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Trim60Q8VI40 Ephb4-201ENSMUST00000061244 4340 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
Trim60Q8VI40 Gm8189-202ENSMUST00000211035 2039 ntTSL 5 BASIC17.1■□□□□ 0.33
Trim60Q8VI40 Nfkbid-201ENSMUST00000046177 2039 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Trim60Q8VI40 Gm20695-202ENSMUST00000176233 1012 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
Trim60Q8VI40 Impa1-204ENSMUST00000191670 1100 ntTSL 2 BASIC17.1■□□□□ 0.33
Trim60Q8VI40 AC156016.1-201ENSMUST00000227190 1035 ntBASIC17.1■□□□□ 0.33
Trim60Q8VI40 AC154649.1-201ENSMUST00000227392 384 ntBASIC17.1■□□□□ 0.33
Trim60Q8VI40 Pigf-201ENSMUST00000024957 988 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Trim60Q8VI40 Ubr3-201ENSMUST00000055758 8072 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Trim60Q8VI40 Sptbn4-203ENSMUST00000108363 4724 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Trim60Q8VI40 Sptbn4-204ENSMUST00000108364 4740 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Trim60Q8VI40 5830415G21Rik-201ENSMUST00000192543 1332 ntBASIC17.1■□□□□ 0.33
Trim60Q8VI40 Rasgrp1-207ENSMUST00000178884 5104 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Trim60Q8VI40 Rgs9-201ENSMUST00000020920 2434 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Trim60Q8VI40 Mapk9-205ENSMUST00000109179 4682 ntTSL 5 BASIC17.1■□□□□ 0.33
Trim60Q8VI40 Mapk9-209ENSMUST00000164643 4682 ntTSL 5 BASIC17.1■□□□□ 0.33
Trim60Q8VI40 Rhot1-201ENSMUST00000017831 3029 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Trim60Q8VI40 Gm6277-201ENSMUST00000180860 1839 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Trim60Q8VI40 Gm45203-201ENSMUST00000206384 1831 ntBASIC17.1■□□□□ 0.33
Trim60Q8VI40 Aldh7a1-201ENSMUST00000066208 1914 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
Trim60Q8VI40 Ccnyl1-202ENSMUST00000114077 3281 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Trim60Q8VI40 Dnajc25-201ENSMUST00000095070 4023 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Trim60Q8VI40 Ppm1d-201ENSMUST00000020835 2899 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Trim60Q8VI40 Tlk2-204ENSMUST00000106941 3699 ntAPPRIS ALT1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Trim60Q8VI40 Ccdc107-202ENSMUST00000107922 865 ntAPPRIS ALT2 TSL 2 BASIC17.09■□□□□ 0.33
Trim60Q8VI40 Cyp4f41-ps-201ENSMUST00000126790 1077 ntBASIC17.09■□□□□ 0.33
Trim60Q8VI40 Ubtf-207ENSMUST00000128016 1062 ntTSL 2 BASIC17.09■□□□□ 0.33
Trim60Q8VI40 Gm17041-201ENSMUST00000163196 479 ntTSL 3 BASIC17.09■□□□□ 0.33
Trim60Q8VI40 Pih1d2-201ENSMUST00000000171 1256 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Trim60Q8VI40 Gm21863-201ENSMUST00000179133 336 ntAPPRIS P1 BASIC17.09■□□□□ 0.33
Trim60Q8VI40 Spata33-206ENSMUST00000212637 569 ntAPPRIS ALT2 TSL 2 BASIC17.09■□□□□ 0.33
Trim60Q8VI40 Odf3b-204ENSMUST00000227834 930 ntBASIC17.09■□□□□ 0.33
Trim60Q8VI40 Ccdc107-201ENSMUST00000030181 817 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Trim60Q8VI40 Tm2d1-201ENSMUST00000030292 952 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Trim60Q8VI40 4933402J07Rik-201ENSMUST00000093342 1304 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Trim60Q8VI40 4930519A11Rik-201ENSMUST00000181381 1523 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Trim60Q8VI40 Zbtb25-201ENSMUST00000167011 1681 ntAPPRIS P1 TSL 2 BASIC17.09■□□□□ 0.33
Trim60Q8VI40 Zfp691-204ENSMUST00000179290 1721 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Trim60Q8VI40 Hand1-203ENSMUST00000160392 1806 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Trim60Q8VI40 Gcnt4-201ENSMUST00000171324 5087 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Trim60Q8VI40 March8-201ENSMUST00000079012 4450 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Trim60Q8VI40 Ccdc71l-201ENSMUST00000172332 4240 ntAPPRIS P1 BASIC17.08■□□□□ 0.33
Trim60Q8VI40 Cdh24-201ENSMUST00000067784 3489 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.33
Trim60Q8VI40 Mgat1-201ENSMUST00000081794 2976 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Trim60Q8VI40 Tmem214-201ENSMUST00000114716 2220 ntAPPRIS ALT2 TSL 5 BASIC17.08■□□□□ 0.33
Trim60Q8VI40 Rilpl1-201ENSMUST00000062153 2249 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Trim60Q8VI40 Rgs7-203ENSMUST00000192227 2113 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.33
Trim60Q8VI40 Ankrd44-210ENSMUST00000179030 6140 ntAPPRIS P2 TSL 1 (best) BASIC17.08■□□□□ 0.33
Retrieved 100 of 76,532 protein–RNA pairs in 33.6 ms