Protein–RNA interactions for Protein: Q8VDW0

Ddx39a, ATP-dependent RNA helicase DDX39A, mousemouse

Known RBP Predictions only

Length 427 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx39aQ8VDW0 Ghrhr-201ENSMUST00000063578 1550 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Ddx39aQ8VDW0 Grk6-202ENSMUST00000099482 2169 ntAPPRIS P3 TSL 1 (best) BASIC18.36■□□□□ 0.53
Ddx39aQ8VDW0 Zc3h14-203ENSMUST00000110104 3146 ntTSL 5 BASIC18.36■□□□□ 0.53
Ddx39aQ8VDW0 Brpf1-203ENSMUST00000113121 4603 ntAPPRIS ALT2 TSL 5 BASIC18.35■□□□□ 0.53
Ddx39aQ8VDW0 Hoxc4-202ENSMUST00000165375 2121 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Ddx39aQ8VDW0 Ptges2-201ENSMUST00000028162 4978 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Ddx39aQ8VDW0 Hcn2-202ENSMUST00000099513 3195 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Ddx39aQ8VDW0 Paip2-201ENSMUST00000041314 1475 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Ddx39aQ8VDW0 Btn1a1-202ENSMUST00000110434 1077 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Ddx39aQ8VDW0 2410004I01Rik-201ENSMUST00000138424 1187 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Ddx39aQ8VDW0 AC153794.1-201ENSMUST00000169148 126 ntBASIC18.35■□□□□ 0.53
Ddx39aQ8VDW0 Gm26644-201ENSMUST00000181365 958 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Ddx39aQ8VDW0 Gm27459-201ENSMUST00000184860 107 ntBASIC18.35■□□□□ 0.53
Ddx39aQ8VDW0 1810010D01Rik-204ENSMUST00000208788 889 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Ddx39aQ8VDW0 Tesc-201ENSMUST00000031304 1031 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Ddx39aQ8VDW0 Mgarp-201ENSMUST00000038154 1232 ntAPPRIS P2 TSL 1 (best) BASIC18.35■□□□□ 0.53
Ddx39aQ8VDW0 Plppr4-201ENSMUST00000061071 5696 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Ddx39aQ8VDW0 Ppm1b-202ENSMUST00000112304 3262 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
Ddx39aQ8VDW0 Tmem94-202ENSMUST00000103033 5238 ntAPPRIS P2 TSL 2 BASIC18.35■□□□□ 0.53
Ddx39aQ8VDW0 Fam199x-201ENSMUST00000047852 8299 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Ddx39aQ8VDW0 Shroom3-204ENSMUST00000168878 5630 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Ddx39aQ8VDW0 Gck-202ENSMUST00000109822 1786 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Ddx39aQ8VDW0 A130051J06Rik-201ENSMUST00000180649 2618 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Ddx39aQ8VDW0 Tulp1-202ENSMUST00000114794 1738 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Ddx39aQ8VDW0 Fcgrt-203ENSMUST00000210642 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
Ddx39aQ8VDW0 Sh2b1-203ENSMUST00000205440 3089 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
Ddx39aQ8VDW0 Gm15442-201ENSMUST00000117905 1527 ntBASIC18.34■□□□□ 0.53
Ddx39aQ8VDW0 Uso1-204ENSMUST00000202155 3707 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
Ddx39aQ8VDW0 Mtrf1l-201ENSMUST00000019908 2588 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Ddx39aQ8VDW0 1810010H24Rik-201ENSMUST00000106767 1100 ntAPPRIS P2 TSL 2 BASIC18.34■□□□□ 0.53
Ddx39aQ8VDW0 Gm16272-201ENSMUST00000128218 388 ntTSL 2 BASIC18.34■□□□□ 0.53
Ddx39aQ8VDW0 Gm12973-201ENSMUST00000143967 607 ntTSL 5 BASIC18.34■□□□□ 0.53
Ddx39aQ8VDW0 2210408F21Rik-212ENSMUST00000152157 490 ntTSL 2 BASIC18.34■□□□□ 0.53
Ddx39aQ8VDW0 Cbr2-201ENSMUST00000026148 1110 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Ddx39aQ8VDW0 Rhog-201ENSMUST00000098230 1269 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Ddx39aQ8VDW0 Ccdc106-204ENSMUST00000207974 2492 ntTSL 2 BASIC18.34■□□□□ 0.53
Ddx39aQ8VDW0 Rnf146-202ENSMUST00000160144 4323 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Ddx39aQ8VDW0 Anapc5-218ENSMUST00000200645 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
Ddx39aQ8VDW0 Ssc4d-204ENSMUST00000111153 2745 ntAPPRIS P1 TSL 5 BASIC18.34■□□□□ 0.53
Ddx39aQ8VDW0 Cdv3-202ENSMUST00000072249 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
Ddx39aQ8VDW0 Lcmt2-201ENSMUST00000099486 2047 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
Ddx39aQ8VDW0 Tmem8-201ENSMUST00000025010 3464 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Ddx39aQ8VDW0 B3gnt4-201ENSMUST00000031384 1423 ntAPPRIS P1 BASIC18.33■□□□□ 0.53
Ddx39aQ8VDW0 Gm44832-201ENSMUST00000208849 2303 ntBASIC18.33■□□□□ 0.53
Ddx39aQ8VDW0 Mrpl39-201ENSMUST00000116584 2294 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Ddx39aQ8VDW0 Mst1-204ENSMUST00000162886 2209 ntAPPRIS ALT2 TSL 5 BASIC18.33■□□□□ 0.53
Ddx39aQ8VDW0 Nrbp1-207ENSMUST00000202576 2221 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
Ddx39aQ8VDW0 Nrbp1-201ENSMUST00000031034 2203 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Ddx39aQ8VDW0 Fosl1-201ENSMUST00000025850 1707 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Ddx39aQ8VDW0 Scml4-203ENSMUST00000105495 1033 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
Ddx39aQ8VDW0 Gm15889-201ENSMUST00000159142 1083 ntTSL 3 BASIC18.33■□□□□ 0.52
Ddx39aQ8VDW0 Ciao1-204ENSMUST00000174030 1109 ntTSL 5 BASIC18.33■□□□□ 0.52
Ddx39aQ8VDW0 Syne4-208ENSMUST00000176304 1006 ntAPPRIS ALT2 TSL 5 BASIC18.33■□□□□ 0.52
Ddx39aQ8VDW0 Gm5864-201ENSMUST00000202263 970 ntBASIC18.33■□□□□ 0.52
Ddx39aQ8VDW0 AC153556.1-201ENSMUST00000215135 794 ntTSL 5 BASIC18.33■□□□□ 0.52
Ddx39aQ8VDW0 AC107711.5-202ENSMUST00000226429 702 ntBASIC18.33■□□□□ 0.52
Ddx39aQ8VDW0 Mzt1-203ENSMUST00000227948 952 ntBASIC18.33■□□□□ 0.52
Ddx39aQ8VDW0 Pdxdc1-202ENSMUST00000115802 2466 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.52
Ddx39aQ8VDW0 Efemp2-204ENSMUST00000165485 1557 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Ddx39aQ8VDW0 Gm26568-201ENSMUST00000180496 1594 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
Ddx39aQ8VDW0 Tnfrsf13c-201ENSMUST00000089161 1906 ntAPPRIS P2 TSL 1 (best) BASIC18.33■□□□□ 0.52
Ddx39aQ8VDW0 Mmd-201ENSMUST00000004050 2677 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Ddx39aQ8VDW0 Relb-201ENSMUST00000049912 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.52
Ddx39aQ8VDW0 Hoxb4-201ENSMUST00000049241 2566 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Ddx39aQ8VDW0 Gm11620-201ENSMUST00000118770 1845 ntBASIC18.33■□□□□ 0.52
Ddx39aQ8VDW0 Mex3a-201ENSMUST00000172699 5778 ntAPPRIS P1 TSL 2 BASIC18.32■□□□□ 0.52
Ddx39aQ8VDW0 Fbxl3-201ENSMUST00000022720 4309 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Ddx39aQ8VDW0 Gm45606-201ENSMUST00000209836 2795 ntBASIC18.32■□□□□ 0.52
Ddx39aQ8VDW0 Gna11-201ENSMUST00000043604 3414 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Ddx39aQ8VDW0 Slc25a3-206ENSMUST00000170810 1341 ntAPPRIS ALT2 TSL 5 BASIC18.32■□□□□ 0.52
Ddx39aQ8VDW0 Ephb4-203ENSMUST00000111055 4296 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
Ddx39aQ8VDW0 Itpkb-201ENSMUST00000070181 6235 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Ddx39aQ8VDW0 Eps8-201ENSMUST00000058210 4567 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Ddx39aQ8VDW0 Lmtk2-201ENSMUST00000041804 8114 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Ddx39aQ8VDW0 Edf1-201ENSMUST00000015236 722 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Ddx39aQ8VDW0 Gm28659-201ENSMUST00000188013 759 ntBASIC18.32■□□□□ 0.52
Ddx39aQ8VDW0 Nmu-201ENSMUST00000031146 828 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Ddx39aQ8VDW0 Cklf-201ENSMUST00000034342 667 ntAPPRIS P4 TSL 1 (best) BASIC18.32■□□□□ 0.52
Ddx39aQ8VDW0 Fam131b-201ENSMUST00000031891 4065 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Ddx39aQ8VDW0 Gopc-202ENSMUST00000105475 4317 ntAPPRIS ALT2 TSL 5 BASIC18.32■□□□□ 0.52
Ddx39aQ8VDW0 Slc26a10-205ENSMUST00000222911 3067 ntAPPRIS ALT2 TSL 5 BASIC18.32■□□□□ 0.52
Ddx39aQ8VDW0 Shd-201ENSMUST00000044216 1546 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
Ddx39aQ8VDW0 Dok3-201ENSMUST00000047877 1546 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Ddx39aQ8VDW0 Cux1-206ENSMUST00000176172 4882 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
Ddx39aQ8VDW0 Ruvbl2-201ENSMUST00000107771 1834 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Ddx39aQ8VDW0 Nfib-206ENSMUST00000107248 3294 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Ddx39aQ8VDW0 Mettl27-205ENSMUST00000111221 1796 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Ddx39aQ8VDW0 Vps72-201ENSMUST00000009102 1456 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Ddx39aQ8VDW0 Otub1-202ENSMUST00000123594 1728 ntTSL 5 BASIC18.32■□□□□ 0.52
Ddx39aQ8VDW0 Itgb4-205ENSMUST00000106461 6208 ntAPPRIS ALT2 TSL 5 BASIC18.31■□□□□ 0.52
Ddx39aQ8VDW0 Nek9-201ENSMUST00000040992 5386 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Ddx39aQ8VDW0 Gm43702-201ENSMUST00000198772 2546 ntBASIC18.31■□□□□ 0.52
Ddx39aQ8VDW0 Rasgef1b-205ENSMUST00000161148 2430 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Ddx39aQ8VDW0 Pid1-201ENSMUST00000168574 2664 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Ddx39aQ8VDW0 Ntn1-202ENSMUST00000108674 5874 ntAPPRIS P1 TSL 5 BASIC18.31■□□□□ 0.52
Ddx39aQ8VDW0 Hoxaas2-202ENSMUST00000155922 1567 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Ddx39aQ8VDW0 2210016L21Rik-201ENSMUST00000031538 2607 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Ddx39aQ8VDW0 St8sia5-201ENSMUST00000075290 1841 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Ddx39aQ8VDW0 Inpp4a-201ENSMUST00000027287 5691 ntAPPRIS P2 TSL 5 BASIC18.31■□□□□ 0.52
Ddx39aQ8VDW0 Tsacc-202ENSMUST00000107556 584 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Retrieved 100 of 76,532 protein–RNA pairs in 38.2 ms