Protein–RNA interactions for Protein: Q8R4R6

Nup35, Nucleoporin NUP53, mousemouse

Predictions only

Length 325 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup35Q8R4R6 Cpsf4-207ENSMUST00000162244 1387 ntAPPRIS P4 TSL 1 (best) BASIC13.55□□□□□ -0.24
Nup35Q8R4R6 Zfx-201ENSMUST00000088102 7002 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Nup35Q8R4R6 Zkscan6-202ENSMUST00000071465 2270 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Nup35Q8R4R6 Rnf170-209ENSMUST00000209300 1881 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Nup35Q8R4R6 Mob2-201ENSMUST00000084418 1490 ntAPPRIS P2 TSL 1 (best) BASIC13.55□□□□□ -0.24
Nup35Q8R4R6 Shox2-202ENSMUST00000162060 1537 ntTSL 3 BASIC13.54□□□□□ -0.24
Nup35Q8R4R6 Perp-201ENSMUST00000019998 1952 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Nup35Q8R4R6 Bcor-202ENSMUST00000065143 6839 ntAPPRIS P4 TSL 1 (best) BASIC13.54□□□□□ -0.24
Nup35Q8R4R6 Hist1h2ac-201ENSMUST00000171127 2482 ntAPPRIS P1 BASIC13.54□□□□□ -0.24
Nup35Q8R4R6 Papola-202ENSMUST00000109901 4380 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Nup35Q8R4R6 Wdr91-201ENSMUST00000081214 2682 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Nup35Q8R4R6 Dera-201ENSMUST00000087675 1729 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Nup35Q8R4R6 Trmt2a-202ENSMUST00000100099 2235 ntAPPRIS P5 TSL 1 (best) BASIC13.54□□□□□ -0.24
Nup35Q8R4R6 Gata5-201ENSMUST00000015771 3277 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Nup35Q8R4R6 App-203ENSMUST00000226801 3299 ntAPPRIS ALT2 BASIC13.54□□□□□ -0.24
Nup35Q8R4R6 Apba3-211ENSMUST00000220297 2268 ntAPPRIS P1 TSL 5 BASIC13.54□□□□□ -0.24
Nup35Q8R4R6 Gm13158-201ENSMUST00000122007 736 ntBASIC13.54□□□□□ -0.24
Nup35Q8R4R6 Nudt8-203ENSMUST00000122924 1082 ntTSL 2 BASIC13.54□□□□□ -0.24
Nup35Q8R4R6 1700067K01Rik-203ENSMUST00000172548 986 ntAPPRIS P2 TSL 1 (best) BASIC13.54□□□□□ -0.24
Nup35Q8R4R6 Tmem234-215ENSMUST00000173758 453 ntTSL 2 BASIC13.54□□□□□ -0.24
Nup35Q8R4R6 Gm36736-201ENSMUST00000206060 646 ntTSL 3 BASIC13.54□□□□□ -0.24
Nup35Q8R4R6 Bex2-201ENSMUST00000049130 903 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Nup35Q8R4R6 Slc37a4-203ENSMUST00000213388 2344 ntAPPRIS P2 TSL 1 (best) BASIC13.54□□□□□ -0.24
Nup35Q8R4R6 Spout1-201ENSMUST00000100220 1805 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Nup35Q8R4R6 Atxn7l2-203ENSMUST00000117784 2387 ntAPPRIS P2 TSL 1 (best) BASIC13.54□□□□□ -0.24
Nup35Q8R4R6 P2rx2-201ENSMUST00000058016 1895 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
Nup35Q8R4R6 Zfand6-208ENSMUST00000209117 2955 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Nup35Q8R4R6 Dhrs7-201ENSMUST00000021512 1385 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Nup35Q8R4R6 Nanp-201ENSMUST00000066640 1394 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Nup35Q8R4R6 Eif4g1-202ENSMUST00000073840 5394 ntAPPRIS ALT2 TSL 5 BASIC13.54□□□□□ -0.24
Nup35Q8R4R6 Gabbr1-202ENSMUST00000172789 1460 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Nup35Q8R4R6 Bicd2-201ENSMUST00000048544 6309 ntAPPRIS P4 TSL 1 (best) BASIC13.54□□□□□ -0.24
Nup35Q8R4R6 Htatsf1-201ENSMUST00000088652 2810 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Nup35Q8R4R6 Zfp691-201ENSMUST00000052715 2341 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Nup35Q8R4R6 Sim1-202ENSMUST00000219436 1687 ntTSL 5 BASIC13.53□□□□□ -0.24
Nup35Q8R4R6 G3bp2-202ENSMUST00000164378 3026 ntAPPRIS P3 TSL 1 (best) BASIC13.53□□□□□ -0.24
Nup35Q8R4R6 Lhx8-205ENSMUST00000205251 1729 ntAPPRIS P1 TSL 5 BASIC13.53□□□□□ -0.24
Nup35Q8R4R6 Kif7-201ENSMUST00000059836 4521 ntAPPRIS P3 TSL 1 (best) BASIC13.53□□□□□ -0.24
Nup35Q8R4R6 Shisa7-201ENSMUST00000066041 6006 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Nup35Q8R4R6 Dlgap1-201ENSMUST00000060072 5420 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Nup35Q8R4R6 F2rl1-201ENSMUST00000022185 2741 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Nup35Q8R4R6 Wnk1-202ENSMUST00000060043 10575 ntAPPRIS P3 TSL 1 (best) BASIC13.53□□□□□ -0.24
Nup35Q8R4R6 Galnt17-202ENSMUST00000160609 2875 ntTSL 5 BASIC13.53□□□□□ -0.24
Nup35Q8R4R6 Adamtsl5-202ENSMUST00000105352 989 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Nup35Q8R4R6 Gm12896-201ENSMUST00000118430 226 ntBASIC13.53□□□□□ -0.24
Nup35Q8R4R6 Gm12382-201ENSMUST00000122005 922 ntBASIC13.53□□□□□ -0.24
Nup35Q8R4R6 Gm37292-201ENSMUST00000192062 758 ntBASIC13.53□□□□□ -0.24
Nup35Q8R4R6 Gm44899-201ENSMUST00000207451 391 ntTSL 3 BASIC13.53□□□□□ -0.24
Nup35Q8R4R6 Cldn3-201ENSMUST00000094245 1259 ntAPPRIS P1 BASIC13.53□□□□□ -0.24
Nup35Q8R4R6 Trpv4-203ENSMUST00000112219 2295 ntTSL 5 BASIC13.53□□□□□ -0.24
Nup35Q8R4R6 Gpn2-201ENSMUST00000030661 1367 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Nup35Q8R4R6 Fhl1-201ENSMUST00000023854 2356 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Nup35Q8R4R6 Asap2-201ENSMUST00000050990 3345 ntAPPRIS ALT2 TSL 5 BASIC13.53□□□□□ -0.24
Nup35Q8R4R6 Rai1-201ENSMUST00000064190 7348 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Nup35Q8R4R6 Taf5l-202ENSMUST00000165628 2973 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Nup35Q8R4R6 Mapk9-205ENSMUST00000109179 4682 ntTSL 5 BASIC13.52□□□□□ -0.24
Nup35Q8R4R6 Mapk9-209ENSMUST00000164643 4682 ntTSL 5 BASIC13.52□□□□□ -0.24
Nup35Q8R4R6 Shcbp1l-201ENSMUST00000042373 2092 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Nup35Q8R4R6 Dpagt1-201ENSMUST00000054708 2205 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Nup35Q8R4R6 Zfp277-202ENSMUST00000069692 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.24
Nup35Q8R4R6 Itgb4-201ENSMUST00000021107 6014 ntAPPRIS P2 TSL 5 BASIC13.52□□□□□ -0.24
Nup35Q8R4R6 Fzd5-201ENSMUST00000063982 6915 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Nup35Q8R4R6 Gm13816-201ENSMUST00000152230 715 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Nup35Q8R4R6 Tpsg1-204ENSMUST00000160920 867 ntTSL 3 BASIC13.52□□□□□ -0.25
Nup35Q8R4R6 Gm27000-201ENSMUST00000182943 842 ntBASIC13.52□□□□□ -0.25
Nup35Q8R4R6 Gm9694-201ENSMUST00000193347 1189 ntBASIC13.52□□□□□ -0.25
Nup35Q8R4R6 Gabarapl1-202ENSMUST00000204487 902 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Nup35Q8R4R6 Rbks-201ENSMUST00000031018 1042 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Nup35Q8R4R6 Fam96b-201ENSMUST00000093234 639 ntTSL 5 BASIC13.52□□□□□ -0.25
Nup35Q8R4R6 Stum-201ENSMUST00000136521 6506 ntAPPRIS P2 TSL 1 (best) BASIC13.52□□□□□ -0.25
Nup35Q8R4R6 Fosl2-201ENSMUST00000031017 6537 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Nup35Q8R4R6 Ghrhr-202ENSMUST00000203241 1328 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Nup35Q8R4R6 Cox18-201ENSMUST00000048363 1333 ntAPPRIS P3 TSL 1 (best) BASIC13.52□□□□□ -0.25
Nup35Q8R4R6 Dnajb14-201ENSMUST00000090178 9477 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Nup35Q8R4R6 Gm43859-201ENSMUST00000200075 1412 ntBASIC13.52□□□□□ -0.25
Nup35Q8R4R6 Iqsec1-202ENSMUST00000101153 8036 ntAPPRIS P1 TSL 5 BASIC13.52□□□□□ -0.25
Nup35Q8R4R6 Krt28-201ENSMUST00000006963 1624 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Nup35Q8R4R6 Smpdl3a-201ENSMUST00000020022 1961 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Nup35Q8R4R6 Gm17200-201ENSMUST00000170214 2022 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Nup35Q8R4R6 Prmt2-202ENSMUST00000099571 2052 ntAPPRIS P3 TSL 1 (best) BASIC13.52□□□□□ -0.25
Nup35Q8R4R6 Tmem50b-201ENSMUST00000023686 2347 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Nup35Q8R4R6 Gm5421-201ENSMUST00000181698 2354 ntBASIC13.52□□□□□ -0.25
Nup35Q8R4R6 Snx8-204ENSMUST00000196130 2547 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.25
Nup35Q8R4R6 Snx8-201ENSMUST00000031539 2627 ntAPPRIS P2 TSL 1 (best) BASIC13.52□□□□□ -0.25
Nup35Q8R4R6 Zswim1-201ENSMUST00000017908 2705 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Nup35Q8R4R6 C130074G19Rik-201ENSMUST00000048308 3035 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Nup35Q8R4R6 Rffl-206ENSMUST00000108173 3489 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Nup35Q8R4R6 Zc3h14-204ENSMUST00000110105 3514 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Nup35Q8R4R6 Agrn-206ENSMUST00000180572 6891 ntAPPRIS P1 TSL 5 BASIC13.51□□□□□ -0.25
Nup35Q8R4R6 Oxr1-206ENSMUST00000170127 4251 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Nup35Q8R4R6 Smad1-203ENSMUST00000109885 3775 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Nup35Q8R4R6 Anks6-201ENSMUST00000084616 3552 ntAPPRIS P1 TSL 5 BASIC13.51□□□□□ -0.25
Nup35Q8R4R6 Syn1-201ENSMUST00000081893 3209 ntAPPRIS P4 TSL 5 BASIC13.51□□□□□ -0.25
Nup35Q8R4R6 Pi4k2b-202ENSMUST00000031082 3034 ntAPPRIS ALT2 TSL 2 BASIC13.51□□□□□ -0.25
Nup35Q8R4R6 Gpc5-202ENSMUST00000175665 2187 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Nup35Q8R4R6 Rhbg-201ENSMUST00000171887 1937 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Nup35Q8R4R6 Bpifb3-201ENSMUST00000088950 1821 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Nup35Q8R4R6 Nudt16-201ENSMUST00000035179 1631 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Nup35Q8R4R6 Tspan4-201ENSMUST00000026585 1466 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Nup35Q8R4R6 Aifm2-201ENSMUST00000067857 1442 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Retrieved 100 of 76,532 protein–RNA pairs in 27.5 ms