Protein–RNA interactions for Protein: Q8R4G9

Chrna3, Neuronal acetylcholine receptor subunit alpha-3, mousemouse

Predictions only

Length 499 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chrna3Q8R4G9 Tnfrsf13c-201ENSMUST00000089161 1906 ntAPPRIS P2 TSL 1 (best) BASIC16.25■□□□□ 0.19
Chrna3Q8R4G9 Camk2n1-201ENSMUST00000050918 4444 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Chrna3Q8R4G9 Slc26a10-205ENSMUST00000222911 3067 ntAPPRIS ALT2 TSL 5 BASIC16.25■□□□□ 0.19
Chrna3Q8R4G9 Fosl2-201ENSMUST00000031017 6537 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Chrna3Q8R4G9 Myo9b-206ENSMUST00000212935 6316 ntAPPRIS ALT2 TSL 5 BASIC16.25■□□□□ 0.19
Chrna3Q8R4G9 Cnksr1-201ENSMUST00000030645 2468 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Chrna3Q8R4G9 Inpp5f-201ENSMUST00000043138 4734 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Chrna3Q8R4G9 Pde3b-201ENSMUST00000032909 6573 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Chrna3Q8R4G9 Rfx7-202ENSMUST00000163401 7880 ntAPPRIS P1 TSL 2 BASIC16.25■□□□□ 0.19
Chrna3Q8R4G9 Sult2b1-204ENSMUST00000209739 1858 ntAPPRIS ALT2 TSL 5 BASIC16.25■□□□□ 0.19
Chrna3Q8R4G9 Isl2-201ENSMUST00000034869 1854 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Chrna3Q8R4G9 Znhit2-201ENSMUST00000162726 1281 ntAPPRIS P1 BASIC16.25■□□□□ 0.19
Chrna3Q8R4G9 AC130713.1-201ENSMUST00000228853 1096 ntBASIC16.25■□□□□ 0.19
Chrna3Q8R4G9 Sdhaf4-201ENSMUST00000027338 683 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Chrna3Q8R4G9 Insl3-201ENSMUST00000034261 623 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Chrna3Q8R4G9 Odf3b-201ENSMUST00000049968 1040 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Chrna3Q8R4G9 Lgr6-201ENSMUST00000044828 6675 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Chrna3Q8R4G9 Tmem233-201ENSMUST00000111997 2477 ntAPPRIS P1 TSL 2 BASIC16.25■□□□□ 0.19
Chrna3Q8R4G9 Ddx28-201ENSMUST00000058579 2262 ntAPPRIS P1 BASIC16.25■□□□□ 0.19
Chrna3Q8R4G9 Gda-201ENSMUST00000087600 5428 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Chrna3Q8R4G9 A130048G24Rik-201ENSMUST00000193052 2750 ntBASIC16.25■□□□□ 0.19
Chrna3Q8R4G9 Trabd-201ENSMUST00000081702 2439 ntAPPRIS P2 TSL 1 (best) BASIC16.25■□□□□ 0.19
Chrna3Q8R4G9 Nrbp1-207ENSMUST00000202576 2221 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Chrna3Q8R4G9 Nrbp1-201ENSMUST00000031034 2203 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Chrna3Q8R4G9 Plppr3-207ENSMUST00000167250 3063 ntAPPRIS ALT2 TSL 2 BASIC16.25■□□□□ 0.19
Chrna3Q8R4G9 Lrp3-201ENSMUST00000118444 3877 ntAPPRIS P1 TSL 5 BASIC16.24■□□□□ 0.19
Chrna3Q8R4G9 Dlx3-201ENSMUST00000092768 2607 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Chrna3Q8R4G9 Capzb-202ENSMUST00000042675 1604 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Chrna3Q8R4G9 Adnp2-201ENSMUST00000066743 5012 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Chrna3Q8R4G9 Lins1-203ENSMUST00000121777 2729 ntAPPRIS P3 TSL 2 BASIC16.24■□□□□ 0.19
Chrna3Q8R4G9 Dohh-202ENSMUST00000121047 946 ntTSL 2 BASIC16.24■□□□□ 0.19
Chrna3Q8R4G9 Gm13524-201ENSMUST00000125869 662 ntTSL 3 BASIC16.24■□□□□ 0.19
Chrna3Q8R4G9 Ramp2-204ENSMUST00000129680 1178 ntAPPRIS P2 TSL 1 (best) BASIC16.24■□□□□ 0.19
Chrna3Q8R4G9 Sytl3-204ENSMUST00000159880 1296 ntTSL 5 BASIC16.24■□□□□ 0.19
Chrna3Q8R4G9 Snhg4-201ENSMUST00000181664 1190 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Chrna3Q8R4G9 Cd70-201ENSMUST00000019633 842 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Chrna3Q8R4G9 Gm10459-201ENSMUST00000202708 1155 ntBASIC16.24■□□□□ 0.19
Chrna3Q8R4G9 Cdk9-202ENSMUST00000120105 1565 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Chrna3Q8R4G9 Zfp264-201ENSMUST00000208656 1563 ntBASIC16.24■□□□□ 0.19
Chrna3Q8R4G9 Spdef-205ENSMUST00000167489 1708 ntAPPRIS P1 TSL 5 BASIC16.24■□□□□ 0.19
Chrna3Q8R4G9 Ell2-201ENSMUST00000001583 4382 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Chrna3Q8R4G9 Rai1-201ENSMUST00000064190 7348 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Chrna3Q8R4G9 Epn1-201ENSMUST00000045277 2334 ntAPPRIS P2 TSL 1 (best) BASIC16.24■□□□□ 0.19
Chrna3Q8R4G9 Dnlz-201ENSMUST00000028295 2916 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Chrna3Q8R4G9 Gnao1-201ENSMUST00000034198 2948 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Chrna3Q8R4G9 Cables1-201ENSMUST00000046948 3202 ntAPPRIS P3 TSL 1 (best) BASIC16.24■□□□□ 0.19
Chrna3Q8R4G9 Dag1-201ENSMUST00000080435 4364 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Chrna3Q8R4G9 Nsmf-202ENSMUST00000074422 2824 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Chrna3Q8R4G9 Relb-201ENSMUST00000049912 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
Chrna3Q8R4G9 Magix-201ENSMUST00000115695 1342 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Chrna3Q8R4G9 4930455H04Rik-201ENSMUST00000117592 1341 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Chrna3Q8R4G9 Gm14029-201ENSMUST00000151051 1348 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Chrna3Q8R4G9 Bean1-201ENSMUST00000093245 3199 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
Chrna3Q8R4G9 Prss8-201ENSMUST00000032988 1852 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Chrna3Q8R4G9 Fgf4-201ENSMUST00000060336 3030 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Chrna3Q8R4G9 Fosl1-201ENSMUST00000025850 1707 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Chrna3Q8R4G9 Zpbp2-203ENSMUST00000107509 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
Chrna3Q8R4G9 Zc3h14-203ENSMUST00000110104 3146 ntTSL 5 BASIC16.23■□□□□ 0.19
Chrna3Q8R4G9 Dbndd2-204ENSMUST00000109350 1055 ntAPPRIS P1 TSL 2 BASIC16.23■□□□□ 0.19
Chrna3Q8R4G9 Fgf8-205ENSMUST00000111927 843 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
Chrna3Q8R4G9 Aicda-202ENSMUST00000160685 1292 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Chrna3Q8R4G9 Hist1h2ad-201ENSMUST00000090776 572 ntAPPRIS P1 BASIC16.23■□□□□ 0.19
Chrna3Q8R4G9 Arhgef11-201ENSMUST00000039476 6776 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Chrna3Q8R4G9 Gm43338-201ENSMUST00000198617 2223 ntBASIC16.23■□□□□ 0.19
Chrna3Q8R4G9 Eif4a2-201ENSMUST00000023599 2208 ntAPPRIS P3 TSL 1 (best) BASIC16.23■□□□□ 0.19
Chrna3Q8R4G9 Fgfr1-214ENSMUST00000178276 4741 ntTSL 5 BASIC16.23■□□□□ 0.19
Chrna3Q8R4G9 Ckap4-202ENSMUST00000167671 2606 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Chrna3Q8R4G9 Gfra2-202ENSMUST00000227633 1480 ntBASIC16.22■□□□□ 0.19
Chrna3Q8R4G9 Cacfd1-205ENSMUST00000114007 2689 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Chrna3Q8R4G9 Bean1-203ENSMUST00000167633 3275 ntAPPRIS ALT2 TSL 5 BASIC16.22■□□□□ 0.19
Chrna3Q8R4G9 Dennd4b-202ENSMUST00000129564 5647 ntAPPRIS ALT2 TSL 5 BASIC16.22■□□□□ 0.19
Chrna3Q8R4G9 Puf60-201ENSMUST00000002599 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
Chrna3Q8R4G9 Abtb1-201ENSMUST00000032169 1845 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Chrna3Q8R4G9 Whrn-206ENSMUST00000102867 4013 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
Chrna3Q8R4G9 Zfp277-201ENSMUST00000069637 2188 ntAPPRIS P3 TSL 1 (best) BASIC16.22■□□□□ 0.19
Chrna3Q8R4G9 Srpx-202ENSMUST00000115543 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
Chrna3Q8R4G9 Gm12359-202ENSMUST00000141696 713 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Chrna3Q8R4G9 Rerg-204ENSMUST00000149100 635 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Chrna3Q8R4G9 Gm12359-203ENSMUST00000153181 680 ntTSL 3 BASIC16.22■□□□□ 0.19
Chrna3Q8R4G9 Mrps12-204ENSMUST00000171183 883 ntAPPRIS P1 TSL 2 BASIC16.22■□□□□ 0.19
Chrna3Q8R4G9 Gm28402-201ENSMUST00000188574 373 ntTSL 3 BASIC16.22■□□□□ 0.19
Chrna3Q8R4G9 Prima1-201ENSMUST00000074416 909 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Chrna3Q8R4G9 Proca1-203ENSMUST00000108317 1359 ntAPPRIS ALT2 TSL 5 BASIC16.22■□□□□ 0.19
Chrna3Q8R4G9 H6pd-201ENSMUST00000030830 4745 ntAPPRIS P3 TSL 1 (best) BASIC16.22■□□□□ 0.19
Chrna3Q8R4G9 AU022751-202ENSMUST00000117544 2201 ntAPPRIS P4 BASIC16.22■□□□□ 0.19
Chrna3Q8R4G9 Nr1h3-202ENSMUST00000111354 1738 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Chrna3Q8R4G9 Tulp1-202ENSMUST00000114794 1738 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Chrna3Q8R4G9 AC121598.2-201ENSMUST00000228376 2325 ntBASIC16.22■□□□□ 0.19
Chrna3Q8R4G9 Col17a1-202ENSMUST00000086923 5477 ntAPPRIS P3 TSL 1 (best) BASIC16.22■□□□□ 0.19
Chrna3Q8R4G9 Celf1-201ENSMUST00000005643 4830 ntAPPRIS P4 TSL 5 BASIC16.21■□□□□ 0.19
Chrna3Q8R4G9 Msmo1-201ENSMUST00000034015 2044 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Chrna3Q8R4G9 Ephb4-203ENSMUST00000111055 4296 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
Chrna3Q8R4G9 Tbx21-201ENSMUST00000001484 2488 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Chrna3Q8R4G9 Scly-201ENSMUST00000027532 2202 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Chrna3Q8R4G9 Uso1-204ENSMUST00000202155 3707 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
Chrna3Q8R4G9 Lmbrd1-202ENSMUST00000186096 688 ntTSL 2 BASIC16.21■□□□□ 0.19
Chrna3Q8R4G9 F420014N23Rik-202ENSMUST00000219079 659 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Chrna3Q8R4G9 Rpp25l-201ENSMUST00000038434 856 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Chrna3Q8R4G9 Rpl36al-201ENSMUST00000054544 526 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Chrna3Q8R4G9 Gm10819-201ENSMUST00000099988 561 ntBASIC16.21■□□□□ 0.19
Retrieved 100 of 76,532 protein–RNA pairs in 36.8 ms