Protein–RNA interactions for Protein: Q8JZK9

Hmgcs1, Hydroxymethylglutaryl-CoA synthase, cytoplasmic, mousemouse

Predictions only

Length 520 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgcs1Q8JZK9 Tmem117-201ENSMUST00000080141 2781 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Hmgcs1Q8JZK9 Cenps-202ENSMUST00000105695 544 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Hmgcs1Q8JZK9 Lman2l-202ENSMUST00000115011 2290 ntTSL 5 BASIC15.81■□□□□ 0.12
Hmgcs1Q8JZK9 Lypla1-208ENSMUST00000150971 877 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Hmgcs1Q8JZK9 Opa3-202ENSMUST00000161711 1390 ntAPPRIS ALT2 TSL 2 BASIC15.81■□□□□ 0.12
Hmgcs1Q8JZK9 Hsf4-202ENSMUST00000163734 1630 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Hmgcs1Q8JZK9 Prkcg-202ENSMUST00000172109 2119 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Hmgcs1Q8JZK9 Mir5122-201ENSMUST00000175004 89 ntBASIC15.81■□□□□ 0.12
Hmgcs1Q8JZK9 1700096K18Rik-201ENSMUST00000188465 1454 ntBASIC15.81■□□□□ 0.12
Hmgcs1Q8JZK9 2310033P09Rik-201ENSMUST00000020719 1285 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Hmgcs1Q8JZK9 Letm2-208ENSMUST00000210616 2974 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Hmgcs1Q8JZK9 Lat-201ENSMUST00000032997 1235 ntAPPRIS P2 TSL 1 (best) BASIC15.81■□□□□ 0.12
Hmgcs1Q8JZK9 Thrsp-201ENSMUST00000043077 1277 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Hmgcs1Q8JZK9 Ddx51-201ENSMUST00000031478 4846 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Hmgcs1Q8JZK9 Xpo4-209ENSMUST00000174545 8680 ntAPPRIS P2 TSL 1 (best) BASIC15.81■□□□□ 0.12
Hmgcs1Q8JZK9 Col18a1-202ENSMUST00000081654 5063 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Hmgcs1Q8JZK9 Dcaf17-203ENSMUST00000112159 2490 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Hmgcs1Q8JZK9 Tsc22d2-203ENSMUST00000199164 4659 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
Hmgcs1Q8JZK9 Gm8189-202ENSMUST00000211035 2039 ntTSL 5 BASIC15.8■□□□□ 0.12
Hmgcs1Q8JZK9 Tacc1-201ENSMUST00000084030 7788 ntAPPRIS P4 TSL 1 (best) BASIC15.8■□□□□ 0.12
Hmgcs1Q8JZK9 Ascl2-201ENSMUST00000009392 1605 ntAPPRIS P2 TSL 1 (best) BASIC15.8■□□□□ 0.12
Hmgcs1Q8JZK9 Zpr1-206ENSMUST00000156440 2984 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Hmgcs1Q8JZK9 AC154855.1-201ENSMUST00000227353 1458 ntBASIC15.8■□□□□ 0.12
Hmgcs1Q8JZK9 Stx18-201ENSMUST00000031008 1471 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Hmgcs1Q8JZK9 Txnrd2-215ENSMUST00000206151 2874 ntAPPRIS P2 TSL 5 BASIC15.8■□□□□ 0.12
Hmgcs1Q8JZK9 Ptprt-201ENSMUST00000109441 6623 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
Hmgcs1Q8JZK9 4930455H04Rik-201ENSMUST00000117592 1341 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Hmgcs1Q8JZK9 Spock1-201ENSMUST00000172326 1320 ntAPPRIS P3 TSL 5 BASIC15.8■□□□□ 0.12
Hmgcs1Q8JZK9 1110046J04Rik-201ENSMUST00000147622 397 ntTSL 3 BASIC15.8■□□□□ 0.12
Hmgcs1Q8JZK9 Nnat-205ENSMUST00000153739 1146 ntAPPRIS ALT1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Hmgcs1Q8JZK9 Pih1d2-201ENSMUST00000000171 1256 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Hmgcs1Q8JZK9 Nnat-206ENSMUST00000172487 404 ntTSL 5 BASIC15.8■□□□□ 0.12
Hmgcs1Q8JZK9 Gm21814-202ENSMUST00000203277 873 ntBASIC15.8■□□□□ 0.12
Hmgcs1Q8JZK9 Olfr1232-201ENSMUST00000099785 936 ntAPPRIS P1 BASIC15.8■□□□□ 0.12
Hmgcs1Q8JZK9 Aste1-202ENSMUST00000123807 2349 ntAPPRIS ALT2 TSL 2 BASIC15.8■□□□□ 0.12
Hmgcs1Q8JZK9 Slco3a1-201ENSMUST00000026897 4589 ntAPPRIS P4 TSL 1 (best) BASIC15.8■□□□□ 0.12
Hmgcs1Q8JZK9 Podnl1-201ENSMUST00000093380 2090 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Hmgcs1Q8JZK9 Sctr-201ENSMUST00000072886 2012 ntAPPRIS P3 TSL 2 BASIC15.8■□□□□ 0.12
Hmgcs1Q8JZK9 Golga7b-201ENSMUST00000087123 2823 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Hmgcs1Q8JZK9 Dnah9-202ENSMUST00000108691 2671 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Hmgcs1Q8JZK9 Dtx2-202ENSMUST00000111142 2650 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
Hmgcs1Q8JZK9 Apoa5-202ENSMUST00000121598 2515 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Hmgcs1Q8JZK9 Bnip2-201ENSMUST00000034754 2464 ntAPPRIS P4 TSL 1 (best) BASIC15.79■□□□□ 0.12
Hmgcs1Q8JZK9 Pola2-202ENSMUST00000165143 2397 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Hmgcs1Q8JZK9 Rnls-201ENSMUST00000096114 1597 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Hmgcs1Q8JZK9 Cyfip2-205ENSMUST00000165599 6659 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Hmgcs1Q8JZK9 Agbl4-205ENSMUST00000106591 1406 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
Hmgcs1Q8JZK9 Col11a2-202ENSMUST00000114252 5620 ntAPPRIS ALT2 TSL 5 BASIC15.79■□□□□ 0.12
Hmgcs1Q8JZK9 Arhgef11-201ENSMUST00000039476 6776 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Hmgcs1Q8JZK9 Prpf40b-212ENSMUST00000145482 3308 ntAPPRIS P2 TSL 1 (best) BASIC15.79■□□□□ 0.12
Hmgcs1Q8JZK9 Tex30-204ENSMUST00000128190 1275 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Hmgcs1Q8JZK9 B430219N15Rik-201ENSMUST00000147230 835 ntTSL 2 BASIC15.79■□□□□ 0.12
Hmgcs1Q8JZK9 Gng2-202ENSMUST00000159028 458 ntAPPRIS P1 TSL 2 BASIC15.79■□□□□ 0.12
Hmgcs1Q8JZK9 Gm17949-201ENSMUST00000210548 1179 ntAPPRIS P1 TSL 5 BASIC15.79■□□□□ 0.12
Hmgcs1Q8JZK9 Smim15-206ENSMUST00000226042 1092 ntAPPRIS P1 BASIC15.79■□□□□ 0.12
Hmgcs1Q8JZK9 Nipa2-201ENSMUST00000032635 3197 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Hmgcs1Q8JZK9 Eda-202ENSMUST00000113775 5088 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Hmgcs1Q8JZK9 Prdm12-201ENSMUST00000113470 2471 ntAPPRIS P1 TSL 5 BASIC15.79■□□□□ 0.12
Hmgcs1Q8JZK9 Gnb3-201ENSMUST00000024206 1846 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Hmgcs1Q8JZK9 Prr14-201ENSMUST00000033095 2402 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Hmgcs1Q8JZK9 Nisch-221ENSMUST00000171735 1763 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Hmgcs1Q8JZK9 Gm26697-201ENSMUST00000180898 1760 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Hmgcs1Q8JZK9 Elf2-201ENSMUST00000062009 3353 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
Hmgcs1Q8JZK9 Atp6v0a1-203ENSMUST00000103110 2716 ntTSL 5 BASIC15.79■□□□□ 0.12
Hmgcs1Q8JZK9 Chst5-201ENSMUST00000034430 2182 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Hmgcs1Q8JZK9 Cdc23-201ENSMUST00000025228 2084 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Hmgcs1Q8JZK9 Lmtk2-201ENSMUST00000041804 8114 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Hmgcs1Q8JZK9 Smad3-201ENSMUST00000034973 5090 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Hmgcs1Q8JZK9 Parg-204ENSMUST00000164137 3013 ntTSL 5 BASIC15.78■□□□□ 0.12
Hmgcs1Q8JZK9 Mms22l-202ENSMUST00000108222 4478 ntAPPRIS P1 TSL 5 BASIC15.78■□□□□ 0.12
Hmgcs1Q8JZK9 Gramd3-201ENSMUST00000070166 2605 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Hmgcs1Q8JZK9 Gapdh-202ENSMUST00000117757 1273 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Hmgcs1Q8JZK9 Cyp4f41-ps-201ENSMUST00000126790 1077 ntBASIC15.78■□□□□ 0.12
Hmgcs1Q8JZK9 Gm4217-201ENSMUST00000182243 1002 ntBASIC15.78■□□□□ 0.12
Hmgcs1Q8JZK9 Ramp1-203ENSMUST00000188475 711 ntTSL 3 BASIC15.78■□□□□ 0.12
Hmgcs1Q8JZK9 Gm43353-201ENSMUST00000199224 1295 ntBASIC15.78■□□□□ 0.12
Hmgcs1Q8JZK9 Rb1-201ENSMUST00000022701 4656 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Hmgcs1Q8JZK9 Ripply2-201ENSMUST00000058846 503 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Hmgcs1Q8JZK9 Tmem91-201ENSMUST00000079439 877 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Hmgcs1Q8JZK9 Gzmd-201ENSMUST00000082093 964 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Hmgcs1Q8JZK9 Fmnl2-202ENSMUST00000050719 3380 ntTSL 5 BASIC15.78■□□□□ 0.12
Hmgcs1Q8JZK9 Hace1-201ENSMUST00000037044 3785 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Hmgcs1Q8JZK9 Mff-212ENSMUST00000162003 2087 ntTSL 5 BASIC15.78■□□□□ 0.12
Hmgcs1Q8JZK9 Mrpl57-201ENSMUST00000022538 2877 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Hmgcs1Q8JZK9 Nhsl1-209ENSMUST00000207038 4854 ntAPPRIS ALT2 TSL 5 BASIC15.78■□□□□ 0.12
Hmgcs1Q8JZK9 Nkx2-1-201ENSMUST00000001536 2809 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Hmgcs1Q8JZK9 Dag1-203ENSMUST00000171412 4415 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Hmgcs1Q8JZK9 Slc6a17-208ENSMUST00000169449 6322 ntAPPRIS ALT1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Hmgcs1Q8JZK9 Slc6a17-201ENSMUST00000029499 6308 ntAPPRIS P3 TSL 1 (best) BASIC15.78■□□□□ 0.12
Hmgcs1Q8JZK9 Gm26568-201ENSMUST00000180496 1594 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Hmgcs1Q8JZK9 Zswim1-201ENSMUST00000017908 2705 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Hmgcs1Q8JZK9 Skap1-203ENSMUST00000100521 1539 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Hmgcs1Q8JZK9 Skap1-204ENSMUST00000103154 1507 ntAPPRIS P3 TSL 1 (best) BASIC15.78■□□□□ 0.12
Hmgcs1Q8JZK9 Ric1-201ENSMUST00000043610 7190 ntAPPRIS P1 TSL 5 BASIC15.78■□□□□ 0.12
Hmgcs1Q8JZK9 Gm26663-201ENSMUST00000181105 1882 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Hmgcs1Q8JZK9 Cfap206-201ENSMUST00000029971 2246 ntAPPRIS P1 TSL 5 BASIC15.78■□□□□ 0.12
Hmgcs1Q8JZK9 Rbm47-203ENSMUST00000113724 2186 ntAPPRIS P3 TSL 5 BASIC15.77■□□□□ 0.12
Hmgcs1Q8JZK9 Rabl6-201ENSMUST00000058137 3230 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Hmgcs1Q8JZK9 Lca5l-202ENSMUST00000113804 3162 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.12
Hmgcs1Q8JZK9 Agbl5-208ENSMUST00000201168 3199 ntAPPRIS ALT2 TSL 5 BASIC15.77■□□□□ 0.12
Retrieved 100 of 76,532 protein–RNA pairs in 25.5 ms