Protein–RNA interactions for Protein: Q8CIR4

Trpm6, Transient receptor potential cation channel subfamily M member 6, mousemouse

Predictions only

Length 2,028 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trpm6Q8CIR4 Bean1-201ENSMUST00000093245 3199 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
Trpm6Q8CIR4 Gps1-207ENSMUST00000172809 2000 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Trpm6Q8CIR4 Tril-201ENSMUST00000127748 5363 ntAPPRIS P1 BASIC16.55■□□□□ 0.24
Trpm6Q8CIR4 Kcnn1-207ENSMUST00000212509 1608 ntAPPRIS ALT2 TSL 5 BASIC16.55■□□□□ 0.24
Trpm6Q8CIR4 Mroh5-201ENSMUST00000071419 2766 ntAPPRIS P2 TSL 1 (best) BASIC16.55■□□□□ 0.24
Trpm6Q8CIR4 Fam107b-203ENSMUST00000115053 688 ntAPPRIS P1 TSL 3 BASIC16.55■□□□□ 0.24
Trpm6Q8CIR4 Lrrc36-206ENSMUST00000216765 2301 ntAPPRIS ALT2 TSL 5 BASIC16.55■□□□□ 0.24
Trpm6Q8CIR4 Gm32996-201ENSMUST00000199828 1447 ntBASIC16.55■□□□□ 0.24
Trpm6Q8CIR4 Sbf2-213ENSMUST00000171218 1476 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Trpm6Q8CIR4 Magi3-203ENSMUST00000122303 3827 ntAPPRIS P3 TSL 1 (best) BASIC16.54■□□□□ 0.24
Trpm6Q8CIR4 Ino80e-203ENSMUST00000106343 1973 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Trpm6Q8CIR4 Psen2-205ENSMUST00000111108 1997 ntAPPRIS P2 TSL 1 (best) BASIC16.54■□□□□ 0.24
Trpm6Q8CIR4 Acot1-201ENSMUST00000168120 2272 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Trpm6Q8CIR4 Eomes-202ENSMUST00000111763 2869 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
Trpm6Q8CIR4 Rplp2-203ENSMUST00000106004 421 ntAPPRIS P1 TSL 2 BASIC16.54■□□□□ 0.24
Trpm6Q8CIR4 Ascl2-202ENSMUST00000121862 814 ntAPPRIS ALT2 BASIC16.54■□□□□ 0.24
Trpm6Q8CIR4 Gm15677-201ENSMUST00000152302 766 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Trpm6Q8CIR4 Gm20324-201ENSMUST00000186291 1118 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Trpm6Q8CIR4 Ten1-201ENSMUST00000021130 902 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Trpm6Q8CIR4 Gm40513-201ENSMUST00000217258 411 ntTSL 3 BASIC16.54■□□□□ 0.24
Trpm6Q8CIR4 Ch25h-201ENSMUST00000050562 1350 ntAPPRIS P1 BASIC16.54■□□□□ 0.24
Trpm6Q8CIR4 Gm13283-201ENSMUST00000191112 1463 ntAPPRIS P1 BASIC16.54■□□□□ 0.24
Trpm6Q8CIR4 Krt12-201ENSMUST00000017741 1852 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Trpm6Q8CIR4 Hexb-201ENSMUST00000022169 1905 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Trpm6Q8CIR4 C2cd4c-202ENSMUST00000178228 2761 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Trpm6Q8CIR4 Pacs2-202ENSMUST00000220541 3101 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
Trpm6Q8CIR4 Evx2-201ENSMUST00000001867 4191 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
Trpm6Q8CIR4 Drd2-201ENSMUST00000075764 2547 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Trpm6Q8CIR4 Sytl3-201ENSMUST00000097430 2100 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Trpm6Q8CIR4 Osbpl1a-205ENSMUST00000119512 1947 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Trpm6Q8CIR4 Fuz-201ENSMUST00000071207 1698 ntAPPRIS P2 TSL 1 (best) BASIC16.53■□□□□ 0.24
Trpm6Q8CIR4 Sigirr-203ENSMUST00000209294 1612 ntAPPRIS P2 TSL 1 (best) BASIC16.53■□□□□ 0.24
Trpm6Q8CIR4 Cmtm3-201ENSMUST00000034343 1616 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Trpm6Q8CIR4 Atp2c1-201ENSMUST00000038118 4876 ntAPPRIS P3 TSL 1 (best) BASIC16.53■□□□□ 0.24
Trpm6Q8CIR4 Tmem116-203ENSMUST00000094357 1366 ntAPPRIS ALT2 TSL 5 BASIC16.53■□□□□ 0.24
Trpm6Q8CIR4 Thap3-202ENSMUST00000105665 832 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
Trpm6Q8CIR4 Gm12497-201ENSMUST00000138778 237 ntBASIC16.53■□□□□ 0.24
Trpm6Q8CIR4 Mir5131-201ENSMUST00000175426 93 ntBASIC16.53■□□□□ 0.24
Trpm6Q8CIR4 Pdcd6-201ENSMUST00000022060 1131 ntAPPRIS P2 TSL 1 (best) BASIC16.53■□□□□ 0.24
Trpm6Q8CIR4 Apopt1-201ENSMUST00000040519 1065 ntAPPRIS P3 TSL 1 (best) BASIC16.53■□□□□ 0.24
Trpm6Q8CIR4 Gm10190-201ENSMUST00000086549 324 ntAPPRIS P1 BASIC16.53■□□□□ 0.24
Trpm6Q8CIR4 Nphp3-201ENSMUST00000035167 5899 ntAPPRIS P2 TSL 1 (best) BASIC16.53■□□□□ 0.24
Trpm6Q8CIR4 Sec61a1-201ENSMUST00000032168 3172 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Trpm6Q8CIR4 Ubtf-206ENSMUST00000107123 2759 ntAPPRIS P3 TSL 5 BASIC16.53■□□□□ 0.24
Trpm6Q8CIR4 Arhgef17-204ENSMUST00000209041 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
Trpm6Q8CIR4 Hoxb4-201ENSMUST00000049241 2566 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Trpm6Q8CIR4 Klhdc8a-201ENSMUST00000046071 4269 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Trpm6Q8CIR4 Sobp-201ENSMUST00000040275 4980 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Trpm6Q8CIR4 Slc1a6-201ENSMUST00000005490 2029 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Trpm6Q8CIR4 Mark3-202ENSMUST00000084953 3365 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Trpm6Q8CIR4 Col15a1-201ENSMUST00000082303 5102 ntAPPRIS ALT2 TSL 2 BASIC16.53■□□□□ 0.24
Trpm6Q8CIR4 Ttyh1-217ENSMUST00000206869 1491 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Trpm6Q8CIR4 Zc3h14-203ENSMUST00000110104 3146 ntTSL 5 BASIC16.53■□□□□ 0.24
Trpm6Q8CIR4 A430057M04Rik-202ENSMUST00000170150 2176 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Trpm6Q8CIR4 Faap20-210ENSMUST00000178473 1076 ntAPPRIS P3 TSL 1 (best) BASIC16.53■□□□□ 0.24
Trpm6Q8CIR4 Gm26756-201ENSMUST00000181689 1294 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Trpm6Q8CIR4 Gm5867-201ENSMUST00000063197 592 ntBASIC16.53■□□□□ 0.24
Trpm6Q8CIR4 Ythdf2-201ENSMUST00000085181 955 ntTSL 2 BASIC16.53■□□□□ 0.24
Trpm6Q8CIR4 St3gal2-201ENSMUST00000034197 4396 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Trpm6Q8CIR4 Ndor1-202ENSMUST00000114349 2336 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Trpm6Q8CIR4 Klhl25-201ENSMUST00000092073 3385 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Trpm6Q8CIR4 Rbpms-213ENSMUST00000191473 2547 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
Trpm6Q8CIR4 Mif4gd-201ENSMUST00000021087 1372 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Trpm6Q8CIR4 Bcl9l-206ENSMUST00000220303 5760 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.24
Trpm6Q8CIR4 Rps6ka2-201ENSMUST00000024575 5404 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Trpm6Q8CIR4 Crybb1-202ENSMUST00000112375 793 ntAPPRIS P1 TSL 3 BASIC16.52■□□□□ 0.24
Trpm6Q8CIR4 Psmc4-206ENSMUST00000140053 1244 ntTSL 5 BASIC16.52■□□□□ 0.24
Trpm6Q8CIR4 Gm8349-201ENSMUST00000182720 1003 ntBASIC16.52■□□□□ 0.24
Trpm6Q8CIR4 AC171004.1-201ENSMUST00000221723 664 ntTSL 3 BASIC16.52■□□□□ 0.24
Trpm6Q8CIR4 Sf3b6-201ENSMUST00000046207 1180 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Trpm6Q8CIR4 Olfr632-201ENSMUST00000098189 954 ntAPPRIS P1 BASIC16.52■□□□□ 0.24
Trpm6Q8CIR4 Kctd9-205ENSMUST00000152243 2528 ntTSL 2 BASIC16.52■□□□□ 0.24
Trpm6Q8CIR4 Actg1-202ENSMUST00000071555 1952 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Trpm6Q8CIR4 Inppl1-202ENSMUST00000165052 4730 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Trpm6Q8CIR4 Fxr1-201ENSMUST00000001620 2459 ntTSL 5 BASIC16.52■□□□□ 0.23
Trpm6Q8CIR4 Hspa1l-201ENSMUST00000007248 2472 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Trpm6Q8CIR4 Snx2-201ENSMUST00000037850 2013 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Trpm6Q8CIR4 9430038I01Rik-202ENSMUST00000117404 699 ntAPPRIS ALT2 TSL 5 BASIC16.52■□□□□ 0.23
Trpm6Q8CIR4 Timm23-201ENSMUST00000013845 1173 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Trpm6Q8CIR4 5430416N02Rik-202ENSMUST00000181873 626 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
Trpm6Q8CIR4 Hbb-bt-201ENSMUST00000098192 703 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Trpm6Q8CIR4 Smc6-201ENSMUST00000020931 5603 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Trpm6Q8CIR4 Krt23-201ENSMUST00000006969 1565 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Trpm6Q8CIR4 Hand1-203ENSMUST00000160392 1806 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Trpm6Q8CIR4 Pcbp4-201ENSMUST00000024260 2035 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Trpm6Q8CIR4 Snupn-201ENSMUST00000068856 1391 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Trpm6Q8CIR4 Smarca5-ps-202ENSMUST00000171805 1284 ntBASIC16.51■□□□□ 0.23
Trpm6Q8CIR4 Washc3-203ENSMUST00000182183 838 ntAPPRIS ALT2 TSL 2 BASIC16.51■□□□□ 0.23
Trpm6Q8CIR4 Tbcc-201ENSMUST00000040434 1164 ntAPPRIS P1 BASIC16.51■□□□□ 0.23
Trpm6Q8CIR4 Rhbdd3-202ENSMUST00000101610 2333 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Trpm6Q8CIR4 Dlgap4-205ENSMUST00000109567 4840 ntAPPRIS ALT2 TSL 5 BASIC16.5■□□□□ 0.23
Trpm6Q8CIR4 Sh2b2-203ENSMUST00000196397 2797 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Trpm6Q8CIR4 Agfg1-206ENSMUST00000189220 8044 ntAPPRIS P2 TSL 1 (best) BASIC16.5■□□□□ 0.23
Trpm6Q8CIR4 Gm13036-201ENSMUST00000117799 748 ntBASIC16.5■□□□□ 0.23
Trpm6Q8CIR4 Gm12350-201ENSMUST00000121208 462 ntBASIC16.5■□□□□ 0.23
Trpm6Q8CIR4 Mkln1os-202ENSMUST00000144232 964 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Trpm6Q8CIR4 D030044L04Rik-201ENSMUST00000204220 1291 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Trpm6Q8CIR4 Gm26646-202ENSMUST00000205705 439 ntTSL 5 BASIC16.5■□□□□ 0.23
Trpm6Q8CIR4 Aurkaip1-201ENSMUST00000084097 1159 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Trpm6Q8CIR4 Hhipl1-201ENSMUST00000021685 5174 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Retrieved 100 of 76,532 protein–RNA pairs in 20.9 ms