Protein–RNA interactions for Protein: Q8C8B0

Alx1, ALX homeobox protein 1, mousemouse

Predictions only

Length 326 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Alx1Q8C8B0 Pld6-202ENSMUST00000125307 948 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Alx1Q8C8B0 Krt10-202ENSMUST00000211768 557 ntTSL 3 BASIC19.29■□□□□ 0.68
Alx1Q8C8B0 Spem1-201ENSMUST00000045771 1041 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Alx1Q8C8B0 Fiz1-201ENSMUST00000077385 2546 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Alx1Q8C8B0 Gpc3-201ENSMUST00000069360 2216 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Alx1Q8C8B0 Col4a3bp-202ENSMUST00000109444 5285 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Alx1Q8C8B0 Ccdc51-201ENSMUST00000026735 1526 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Alx1Q8C8B0 Sdc3-201ENSMUST00000070478 4973 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Alx1Q8C8B0 Ddn-201ENSMUST00000075444 3740 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Alx1Q8C8B0 Mir22hg-202ENSMUST00000149940 1752 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Alx1Q8C8B0 Dok3-202ENSMUST00000223563 1644 ntAPPRIS P1 BASIC19.29■□□□□ 0.68
Alx1Q8C8B0 Wac-207ENSMUST00000167020 5208 ntAPPRIS P3 TSL 1 (best) BASIC19.28■□□□□ 0.68
Alx1Q8C8B0 Raxos1-201ENSMUST00000181100 2547 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Alx1Q8C8B0 Slc25a39-201ENSMUST00000018821 1685 ntAPPRIS P2 TSL 1 (best) BASIC19.28■□□□□ 0.68
Alx1Q8C8B0 Zfp277-201ENSMUST00000069637 2188 ntAPPRIS P3 TSL 1 (best) BASIC19.28■□□□□ 0.68
Alx1Q8C8B0 Mark3-201ENSMUST00000075281 3321 ntAPPRIS P2 TSL 1 (best) BASIC19.28■□□□□ 0.68
Alx1Q8C8B0 Bhlhe41-202ENSMUST00000111703 744 ntTSL 3 BASIC19.28■□□□□ 0.68
Alx1Q8C8B0 E2f7-205ENSMUST00000173634 827 ntTSL 2 BASIC19.28■□□□□ 0.68
Alx1Q8C8B0 Gm26887-201ENSMUST00000181282 547 ntTSL 5 BASIC19.28■□□□□ 0.68
Alx1Q8C8B0 Jagn1-202ENSMUST00000204254 1147 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Alx1Q8C8B0 Npw-202ENSMUST00000213213 531 ntAPPRIS P2 TSL 1 (best) BASIC19.28■□□□□ 0.68
Alx1Q8C8B0 Icmt-201ENSMUST00000048892 4919 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Alx1Q8C8B0 Hmbs-201ENSMUST00000077353 1605 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Alx1Q8C8B0 Ctu1-201ENSMUST00000038332 2475 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Alx1Q8C8B0 Zic3-202ENSMUST00000088629 1951 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Alx1Q8C8B0 Kcnq2-205ENSMUST00000103048 2827 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Alx1Q8C8B0 Plekha4-202ENSMUST00000209517 2577 ntAPPRIS P2 TSL 5 BASIC19.28■□□□□ 0.68
Alx1Q8C8B0 Lhfp-203ENSMUST00000147139 1932 ntAPPRIS P1 TSL 5 BASIC19.27■□□□□ 0.68
Alx1Q8C8B0 Mcoln2-202ENSMUST00000098524 2492 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
Alx1Q8C8B0 Fip1l1-203ENSMUST00000113535 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
Alx1Q8C8B0 H2-Q10-202ENSMUST00000174525 1991 ntAPPRIS P1 TSL 5 BASIC19.27■□□□□ 0.68
Alx1Q8C8B0 Zscan10-204ENSMUST00000118369 1006 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
Alx1Q8C8B0 Gm14464-201ENSMUST00000119658 1254 ntBASIC19.27■□□□□ 0.68
Alx1Q8C8B0 Gm16272-201ENSMUST00000128218 388 ntTSL 2 BASIC19.27■□□□□ 0.68
Alx1Q8C8B0 CT009713.7-201ENSMUST00000224689 571 ntBASIC19.27■□□□□ 0.68
Alx1Q8C8B0 Dcps-201ENSMUST00000034539 1274 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Alx1Q8C8B0 Comp-201ENSMUST00000003659 2416 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Alx1Q8C8B0 Akt2-214ENSMUST00000167435 2865 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Alx1Q8C8B0 Slc39a10-201ENSMUST00000027131 5498 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Alx1Q8C8B0 Zswim1-201ENSMUST00000017908 2705 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
Alx1Q8C8B0 Stxbp5-209ENSMUST00000141722 4702 ntAPPRIS P2 TSL 5 BASIC19.27■□□□□ 0.67
Alx1Q8C8B0 Slc1a6-201ENSMUST00000005490 2029 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
Alx1Q8C8B0 Wt1-205ENSMUST00000143043 3090 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
Alx1Q8C8B0 Zxdc-203ENSMUST00000113539 4864 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
Alx1Q8C8B0 Disc1-201ENSMUST00000074562 2597 ntAPPRIS ALT2 TSL 5 BASIC19.26■□□□□ 0.67
Alx1Q8C8B0 Disc1-203ENSMUST00000098311 2597 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
Alx1Q8C8B0 Rnf170-208ENSMUST00000153528 1026 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
Alx1Q8C8B0 Psme2-208ENSMUST00000161807 962 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Alx1Q8C8B0 2810013P06Rik-201ENSMUST00000186531 2137 ntBASIC19.26■□□□□ 0.67
Alx1Q8C8B0 Gm26709-203ENSMUST00000223260 715 ntTSL 5 BASIC19.26■□□□□ 0.67
Alx1Q8C8B0 Gm9991-201ENSMUST00000070048 1207 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Alx1Q8C8B0 Ptpdc1-204ENSMUST00000222028 3164 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
Alx1Q8C8B0 Atg4c-201ENSMUST00000030279 3178 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Alx1Q8C8B0 Col15a1-201ENSMUST00000082303 5102 ntAPPRIS ALT2 TSL 2 BASIC19.26■□□□□ 0.67
Alx1Q8C8B0 Klhdc8b-201ENSMUST00000035232 1897 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Alx1Q8C8B0 Fam76a-202ENSMUST00000097856 1863 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Alx1Q8C8B0 Actg1-202ENSMUST00000071555 1952 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Alx1Q8C8B0 Cnppd1-208ENSMUST00000190679 2062 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Alx1Q8C8B0 Babam1-201ENSMUST00000002473 1433 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Alx1Q8C8B0 Dohh-201ENSMUST00000072751 1444 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Alx1Q8C8B0 Gbe1-201ENSMUST00000023393 2846 ntAPPRIS ALT2 TSL 5 BASIC19.25■□□□□ 0.67
Alx1Q8C8B0 Col15a1-202ENSMUST00000102917 5172 ntAPPRIS P2 TSL 1 (best) BASIC19.25■□□□□ 0.67
Alx1Q8C8B0 Lrch3-203ENSMUST00000135193 2794 ntAPPRIS ALT2 TSL 5 BASIC19.25■□□□□ 0.67
Alx1Q8C8B0 Zbtb46-202ENSMUST00000087409 2577 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Alx1Q8C8B0 Pcmt1-202ENSMUST00000159917 2491 ntAPPRIS P3 TSL 1 (best) BASIC19.25■□□□□ 0.67
Alx1Q8C8B0 Ociad2-202ENSMUST00000200776 2359 ntTSL 3 BASIC19.25■□□□□ 0.67
Alx1Q8C8B0 Sh3gl2-203ENSMUST00000107188 2286 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Alx1Q8C8B0 Rnpep-202ENSMUST00000077340 2288 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Alx1Q8C8B0 Ormdl3-201ENSMUST00000052919 2184 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Alx1Q8C8B0 Dnajc2-204ENSMUST00000115195 1994 ntTSL 5 BASIC19.25■□□□□ 0.67
Alx1Q8C8B0 Hnrnpa1-202ENSMUST00000087351 1759 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Alx1Q8C8B0 Eif6-202ENSMUST00000109638 1382 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Alx1Q8C8B0 Ube2f-204ENSMUST00000178627 1363 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Alx1Q8C8B0 Klk12-202ENSMUST00000107970 1115 ntAPPRIS P1 TSL 5 BASIC19.25■□□□□ 0.67
Alx1Q8C8B0 Gm12973-201ENSMUST00000143967 607 ntTSL 5 BASIC19.25■□□□□ 0.67
Alx1Q8C8B0 Pafah1b3-207ENSMUST00000155118 679 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Alx1Q8C8B0 AC153794.1-201ENSMUST00000169148 126 ntBASIC19.25■□□□□ 0.67
Alx1Q8C8B0 Mir3081-201ENSMUST00000175305 84 ntBASIC19.25■□□□□ 0.67
Alx1Q8C8B0 Rbm4-203ENSMUST00000178615 1018 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Alx1Q8C8B0 Gm26620-201ENSMUST00000180542 817 ntAPPRIS P1 BASIC19.25■□□□□ 0.67
Alx1Q8C8B0 Gm17807-201ENSMUST00000186869 298 ntBASIC19.25■□□□□ 0.67
Alx1Q8C8B0 Gm43077-201ENSMUST00000200602 491 ntTSL 3 BASIC19.25■□□□□ 0.67
Alx1Q8C8B0 Lmo1-203ENSMUST00000208136 772 ntTSL 2 BASIC19.25■□□□□ 0.67
Alx1Q8C8B0 Ifi27l2a-201ENSMUST00000055071 463 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Alx1Q8C8B0 Rab6a-201ENSMUST00000032946 3214 ntAPPRIS P3 TSL 1 (best) BASIC19.25■□□□□ 0.67
Alx1Q8C8B0 Syt7-203ENSMUST00000169121 6834 ntTSL 5 BASIC19.25■□□□□ 0.67
Alx1Q8C8B0 Nf2-205ENSMUST00000109910 4720 ntAPPRIS P3 TSL 1 (best) BASIC19.25■□□□□ 0.67
Alx1Q8C8B0 Mcl1-201ENSMUST00000037947 3418 ntAPPRIS P2 TSL 1 (best) BASIC19.25■□□□□ 0.67
Alx1Q8C8B0 Cwh43-201ENSMUST00000031040 2716 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Alx1Q8C8B0 Tmf1-201ENSMUST00000095664 5732 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Alx1Q8C8B0 Sertad4-204ENSMUST00000155579 3350 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Alx1Q8C8B0 Lrrtm1-202ENSMUST00000159616 2541 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Alx1Q8C8B0 Snx8-204ENSMUST00000196130 2547 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
Alx1Q8C8B0 Pgc-201ENSMUST00000024782 1388 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Alx1Q8C8B0 Tfap2b-202ENSMUST00000064976 1946 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Alx1Q8C8B0 Asph-210ENSMUST00000108337 2836 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Alx1Q8C8B0 Bex3-204ENSMUST00000178632 933 ntAPPRIS P3 TSL 2 BASIC19.24■□□□□ 0.67
Alx1Q8C8B0 Gmnn-201ENSMUST00000006898 1127 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Alx1Q8C8B0 Cidec-202ENSMUST00000113089 1720 ntAPPRIS P2 TSL 1 (best) BASIC19.24■□□□□ 0.67
Alx1Q8C8B0 Scarf2-201ENSMUST00000012161 3302 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Retrieved 100 of 76,532 protein–RNA pairs in 17.8 ms