Protein–RNA interactions for Protein: Q8C7D3

Pabpc5, Poly A binding protein, cytoplasmic 5, mousemouse

Known RBP Predictions only

Length 381 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pabpc5Q8C7D3 Syngap1-204ENSMUST00000194598 6011 ntAPPRIS P2 TSL 5 BASIC16.6■□□□□ 0.25
Pabpc5Q8C7D3 Ccdc166-202ENSMUST00000183130 1563 ntAPPRIS P1 TSL 2 BASIC16.6■□□□□ 0.25
Pabpc5Q8C7D3 Nsmf-203ENSMUST00000100334 2957 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Pabpc5Q8C7D3 5031425F14Rik-201ENSMUST00000127920 2098 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Pabpc5Q8C7D3 Acbd6-201ENSMUST00000035560 5592 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Pabpc5Q8C7D3 Ppdpf-201ENSMUST00000016488 1160 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Pabpc5Q8C7D3 Calu-207ENSMUST00000173216 673 ntTSL 5 BASIC16.6■□□□□ 0.25
Pabpc5Q8C7D3 Gm28033-201ENSMUST00000184224 96 ntBASIC16.6■□□□□ 0.25
Pabpc5Q8C7D3 Slc11a1-201ENSMUST00000027368 2315 ntAPPRIS P2 TSL 1 (best) BASIC16.6■□□□□ 0.25
Pabpc5Q8C7D3 Gm10649-203ENSMUST00000148066 1812 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Pabpc5Q8C7D3 Ngrn-201ENSMUST00000117989 1317 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Pabpc5Q8C7D3 Acads-201ENSMUST00000031524 1870 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Pabpc5Q8C7D3 Cdipt-201ENSMUST00000032920 1974 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Pabpc5Q8C7D3 Itsn1-203ENSMUST00000095909 6103 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Pabpc5Q8C7D3 Il17re-208ENSMUST00000204774 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
Pabpc5Q8C7D3 Rsu1-201ENSMUST00000028059 1546 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Pabpc5Q8C7D3 Tmx1-201ENSMUST00000021471 2795 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Pabpc5Q8C7D3 Hsf4-202ENSMUST00000163734 1630 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Pabpc5Q8C7D3 Bambi-201ENSMUST00000025075 5040 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Pabpc5Q8C7D3 Rbbp7-203ENSMUST00000112327 1862 ntTSL 5 BASIC16.59■□□□□ 0.25
Pabpc5Q8C7D3 Lrrc7-201ENSMUST00000106044 5918 ntAPPRIS ALT2 TSL 5 BASIC16.59■□□□□ 0.25
Pabpc5Q8C7D3 Rab3d-202ENSMUST00000119055 694 ntTSL 3 BASIC16.59■□□□□ 0.25
Pabpc5Q8C7D3 Aicda-202ENSMUST00000160685 1292 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Pabpc5Q8C7D3 Rpl14-201ENSMUST00000165532 1009 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Pabpc5Q8C7D3 Gm3272-201ENSMUST00000181181 1229 ntBASIC16.59■□□□□ 0.25
Pabpc5Q8C7D3 Gm17807-201ENSMUST00000186869 298 ntBASIC16.59■□□□□ 0.25
Pabpc5Q8C7D3 AC133598.3-202ENSMUST00000224219 531 ntBASIC16.59■□□□□ 0.25
Pabpc5Q8C7D3 Tctex1d4-201ENSMUST00000062206 990 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Pabpc5Q8C7D3 Gm10566-201ENSMUST00000086739 996 ntBASIC16.59■□□□□ 0.25
Pabpc5Q8C7D3 Rsph3a-201ENSMUST00000097423 2189 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Pabpc5Q8C7D3 Ubfd1-201ENSMUST00000033158 4849 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Pabpc5Q8C7D3 Lman2l-202ENSMUST00000115011 2290 ntTSL 5 BASIC16.59■□□□□ 0.25
Pabpc5Q8C7D3 Kcmf1-201ENSMUST00000068697 3251 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Pabpc5Q8C7D3 Tlk1-201ENSMUST00000038584 4280 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Pabpc5Q8C7D3 Dmap1-201ENSMUST00000102687 1566 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Pabpc5Q8C7D3 Cldn4-201ENSMUST00000051401 1816 ntAPPRIS P1 BASIC16.59■□□□□ 0.25
Pabpc5Q8C7D3 Bcap29-201ENSMUST00000020979 1949 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
Pabpc5Q8C7D3 Spi1-201ENSMUST00000002180 2034 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
Pabpc5Q8C7D3 Pdss2-201ENSMUST00000095725 2127 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
Pabpc5Q8C7D3 Antxr2-202ENSMUST00000199088 2739 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.25
Pabpc5Q8C7D3 Dnm1-216ENSMUST00000201494 2732 ntTSL 5 BASIC16.58■□□□□ 0.25
Pabpc5Q8C7D3 Ptprt-201ENSMUST00000109441 6623 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.25
Pabpc5Q8C7D3 Prpf40b-212ENSMUST00000145482 3308 ntAPPRIS P2 TSL 1 (best) BASIC16.58■□□□□ 0.24
Pabpc5Q8C7D3 Snx27-202ENSMUST00000107283 3531 ntAPPRIS P4 TSL 1 (best) BASIC16.58■□□□□ 0.24
Pabpc5Q8C7D3 Sirt7-202ENSMUST00000106183 427 ntTSL 3 BASIC16.58■□□□□ 0.24
Pabpc5Q8C7D3 Zkscan8-202ENSMUST00000110481 728 ntTSL 2 BASIC16.58■□□□□ 0.24
Pabpc5Q8C7D3 Rapgef3os1-201ENSMUST00000149373 483 ntTSL 3 BASIC16.58■□□□□ 0.24
Pabpc5Q8C7D3 Gm8797-201ENSMUST00000192045 490 ntAPPRIS P1 BASIC16.58■□□□□ 0.24
Pabpc5Q8C7D3 Ndufs7-201ENSMUST00000020361 758 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Pabpc5Q8C7D3 Gm5587-201ENSMUST00000206270 674 ntBASIC16.58■□□□□ 0.24
Pabpc5Q8C7D3 Med29-201ENSMUST00000003536 1281 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Pabpc5Q8C7D3 Calm2-201ENSMUST00000040440 1205 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Pabpc5Q8C7D3 Pafah1b3-201ENSMUST00000005583 901 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Pabpc5Q8C7D3 Gzme-201ENSMUST00000089549 916 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Pabpc5Q8C7D3 Fthl17f-201ENSMUST00000097029 847 ntAPPRIS P1 BASIC16.58■□□□□ 0.24
Pabpc5Q8C7D3 Ube2d1-201ENSMUST00000020085 1431 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Pabpc5Q8C7D3 Fam131c-201ENSMUST00000006380 1433 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Pabpc5Q8C7D3 Psmd8-203ENSMUST00000186182 1512 ntAPPRIS P2 TSL 1 (best) BASIC16.58■□□□□ 0.24
Pabpc5Q8C7D3 Aqp5-202ENSMUST00000169082 1551 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Pabpc5Q8C7D3 Brpf1-202ENSMUST00000113119 4826 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.24
Pabpc5Q8C7D3 Tmem131l-201ENSMUST00000052342 4815 ntAPPRIS ALT2 TSL 5 BASIC16.58■□□□□ 0.24
Pabpc5Q8C7D3 Irak2-203ENSMUST00000089023 1734 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
Pabpc5Q8C7D3 Sorcs3-201ENSMUST00000078880 5634 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Pabpc5Q8C7D3 Rpf1-203ENSMUST00000199079 1978 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
Pabpc5Q8C7D3 Ppp2r1b-204ENSMUST00000174628 2195 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
Pabpc5Q8C7D3 Dbn1-202ENSMUST00000109921 2378 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.24
Pabpc5Q8C7D3 Ran-201ENSMUST00000031383 2377 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Pabpc5Q8C7D3 Fiz1-203ENSMUST00000167804 2637 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Pabpc5Q8C7D3 Mycn-201ENSMUST00000043396 2674 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Pabpc5Q8C7D3 Fhl1-203ENSMUST00000114769 2770 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
Pabpc5Q8C7D3 Trim67-202ENSMUST00000167588 8735 ntAPPRIS P1 TSL 5 BASIC16.58■□□□□ 0.24
Pabpc5Q8C7D3 Gpat3-203ENSMUST00000112887 3059 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Pabpc5Q8C7D3 Zfp710-201ENSMUST00000049680 4721 ntAPPRIS P4 TSL 1 (best) BASIC16.58■□□□□ 0.24
Pabpc5Q8C7D3 Zmym3-206ENSMUST00000120107 5882 ntAPPRIS ALT2 TSL 5 BASIC16.58■□□□□ 0.24
Pabpc5Q8C7D3 Kcnab3-201ENSMUST00000018614 2538 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Pabpc5Q8C7D3 Rara-204ENSMUST00000107475 2469 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Pabpc5Q8C7D3 Fxyd6-201ENSMUST00000085939 1788 ntAPPRIS P2 TSL 1 (best) BASIC16.57■□□□□ 0.24
Pabpc5Q8C7D3 Dpep3-201ENSMUST00000034371 1698 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Pabpc5Q8C7D3 Pou2f2-202ENSMUST00000108413 1599 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Pabpc5Q8C7D3 Tmem170-201ENSMUST00000034431 3878 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Pabpc5Q8C7D3 Gm11355-201ENSMUST00000121120 306 ntBASIC16.57■□□□□ 0.24
Pabpc5Q8C7D3 Faap20-210ENSMUST00000178473 1076 ntAPPRIS P3 TSL 1 (best) BASIC16.57■□□□□ 0.24
Pabpc5Q8C7D3 Gm38282-201ENSMUST00000192751 695 ntTSL 5 BASIC16.57■□□□□ 0.24
Pabpc5Q8C7D3 AC156832.2-201ENSMUST00000216217 1295 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Pabpc5Q8C7D3 Iscu-201ENSMUST00000026937 957 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Pabpc5Q8C7D3 Thrsp-201ENSMUST00000043077 1277 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Pabpc5Q8C7D3 Eda-203ENSMUST00000113776 5105 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Pabpc5Q8C7D3 A830073O21Rik-202ENSMUST00000205693 3096 ntBASIC16.57■□□□□ 0.24
Pabpc5Q8C7D3 Asph-204ENSMUST00000084915 2884 ntTSL 5 BASIC16.57■□□□□ 0.24
Pabpc5Q8C7D3 Fmnl2-202ENSMUST00000050719 3380 ntTSL 5 BASIC16.57■□□□□ 0.24
Pabpc5Q8C7D3 Ing1-202ENSMUST00000209565 1971 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Pabpc5Q8C7D3 Rab27b-202ENSMUST00000117692 2842 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Pabpc5Q8C7D3 Tdrd12-201ENSMUST00000032701 1620 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Pabpc5Q8C7D3 Rasd1-201ENSMUST00000062405 1611 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Pabpc5Q8C7D3 Ntrk1-201ENSMUST00000029712 2588 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Pabpc5Q8C7D3 Afg1l-201ENSMUST00000041024 2513 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Pabpc5Q8C7D3 Epm2a-201ENSMUST00000069106 3287 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Pabpc5Q8C7D3 Aipl1-201ENSMUST00000048207 2309 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Pabpc5Q8C7D3 Ankrd13b-201ENSMUST00000037593 3105 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
Pabpc5Q8C7D3 Fam159b-201ENSMUST00000043061 1310 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Retrieved 100 of 76,532 protein–RNA pairs in 43.5 ms