Protein–RNA interactions for Protein: Q8BTW8

Cdk5rap1, CDK5 regulatory subunit-associated protein 1, mousemouse

Predictions only

Length 588 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdk5rap1Q8BTW8 Fosl1-201ENSMUST00000025850 1707 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Cdk5rap1Q8BTW8 Osgin2-201ENSMUST00000037198 2658 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Cdk5rap1Q8BTW8 Adal-203ENSMUST00000110662 1231 ntTSL 5 BASIC15.69■□□□□ 0.1
Cdk5rap1Q8BTW8 Gm14464-201ENSMUST00000119658 1254 ntBASIC15.69■□□□□ 0.1
Cdk5rap1Q8BTW8 Gm14964-202ENSMUST00000149574 716 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Cdk5rap1Q8BTW8 Gm10052-201ENSMUST00000168019 960 ntBASIC15.69■□□□□ 0.1
Cdk5rap1Q8BTW8 4930515G01Rik-201ENSMUST00000173208 1247 ntBASIC15.69■□□□□ 0.1
Cdk5rap1Q8BTW8 Rpp40-202ENSMUST00000174230 1053 ntTSL 5 BASIC15.69■□□□□ 0.1
Cdk5rap1Q8BTW8 Gm28051-201ENSMUST00000179306 445 ntAPPRIS P1 TSL 2 BASIC15.69■□□□□ 0.1
Cdk5rap1Q8BTW8 Stambp-206ENSMUST00000206400 2144 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Cdk5rap1Q8BTW8 Fuz-206ENSMUST00000207485 1140 ntAPPRIS ALT1 TSL 5 BASIC15.69■□□□□ 0.1
Cdk5rap1Q8BTW8 Gm7729-201ENSMUST00000050143 801 ntBASIC15.69■□□□□ 0.1
Cdk5rap1Q8BTW8 Myb-201ENSMUST00000020158 3074 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
Cdk5rap1Q8BTW8 Ptpdc1-204ENSMUST00000222028 3164 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Cdk5rap1Q8BTW8 Evx2-201ENSMUST00000001867 4191 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Cdk5rap1Q8BTW8 Krt12-201ENSMUST00000017741 1852 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Cdk5rap1Q8BTW8 Gm5421-201ENSMUST00000181698 2354 ntBASIC15.69■□□□□ 0.1
Cdk5rap1Q8BTW8 Mturn-203ENSMUST00000190641 5303 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Cdk5rap1Q8BTW8 Col27a1-201ENSMUST00000036300 7612 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Cdk5rap1Q8BTW8 Apbb1-205ENSMUST00000187057 1630 ntTSL 5 BASIC15.68■□□□□ 0.1
Cdk5rap1Q8BTW8 Strn-203ENSMUST00000145910 8629 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Cdk5rap1Q8BTW8 Nrxn1-217ENSMUST00000174337 3021 ntTSL 5 BASIC15.68■□□□□ 0.1
Cdk5rap1Q8BTW8 Brpf1-202ENSMUST00000113119 4826 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Cdk5rap1Q8BTW8 Col11a2-203ENSMUST00000114255 5722 ntAPPRIS ALT2 TSL 5 BASIC15.68■□□□□ 0.1
Cdk5rap1Q8BTW8 Dzip3-202ENSMUST00000121869 5820 ntAPPRIS ALT2 TSL 5 BASIC15.68■□□□□ 0.1
Cdk5rap1Q8BTW8 Lin9-203ENSMUST00000192561 3160 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Cdk5rap1Q8BTW8 Gm42417-201ENSMUST00000191849 2256 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Cdk5rap1Q8BTW8 Neil3-201ENSMUST00000047768 2253 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Cdk5rap1Q8BTW8 Ccdc88a-201ENSMUST00000040182 9376 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
Cdk5rap1Q8BTW8 Mettl27-205ENSMUST00000111221 1796 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Cdk5rap1Q8BTW8 Layn-201ENSMUST00000098782 1786 ntAPPRIS P2 TSL 5 BASIC15.68■□□□□ 0.1
Cdk5rap1Q8BTW8 Yif1b-203ENSMUST00000108238 1126 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Cdk5rap1Q8BTW8 Gm7153-201ENSMUST00000117092 455 ntBASIC15.68■□□□□ 0.1
Cdk5rap1Q8BTW8 Alkal1-201ENSMUST00000133144 971 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Cdk5rap1Q8BTW8 Tmem178b-203ENSMUST00000180886 712 ntTSL 5 BASIC15.68■□□□□ 0.1
Cdk5rap1Q8BTW8 Gm38119-201ENSMUST00000192027 755 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
Cdk5rap1Q8BTW8 Npcd-201ENSMUST00000023060 1162 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Cdk5rap1Q8BTW8 Tomm22-201ENSMUST00000023062 1031 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Cdk5rap1Q8BTW8 3110040N11Rik-201ENSMUST00000026092 887 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Cdk5rap1Q8BTW8 Abhd10-201ENSMUST00000066983 2848 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Cdk5rap1Q8BTW8 Nectin3-202ENSMUST00000023335 9116 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Cdk5rap1Q8BTW8 Gm26774-201ENSMUST00000181534 2401 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Cdk5rap1Q8BTW8 Atoh1-201ENSMUST00000101351 2121 ntAPPRIS P1 BASIC15.68■□□□□ 0.1
Cdk5rap1Q8BTW8 Whrn-206ENSMUST00000102867 4013 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Cdk5rap1Q8BTW8 Kcns2-201ENSMUST00000072868 5456 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Cdk5rap1Q8BTW8 Cdca7-201ENSMUST00000102691 2424 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Cdk5rap1Q8BTW8 Mag-201ENSMUST00000040548 2419 ntAPPRIS P2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Cdk5rap1Q8BTW8 Mtmr3-202ENSMUST00000109943 5674 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Cdk5rap1Q8BTW8 Rap2a-201ENSMUST00000062117 4191 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Cdk5rap1Q8BTW8 Relb-201ENSMUST00000049912 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Cdk5rap1Q8BTW8 Aqp5-202ENSMUST00000169082 1551 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Cdk5rap1Q8BTW8 Gm26825-201ENSMUST00000181751 2026 ntTSL 5 BASIC15.67■□□□□ 0.1
Cdk5rap1Q8BTW8 Chtf8-206ENSMUST00000177068 2931 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Cdk5rap1Q8BTW8 Rnf181-203ENSMUST00000114095 869 ntTSL 3 BASIC15.67■□□□□ 0.1
Cdk5rap1Q8BTW8 Rasl2-9-201ENSMUST00000147835 1013 ntAPPRIS P1 BASIC15.67■□□□□ 0.1
Cdk5rap1Q8BTW8 Mpst-202ENSMUST00000167140 1279 ntAPPRIS P1 TSL 5 BASIC15.67■□□□□ 0.1
Cdk5rap1Q8BTW8 Umpk-ps-201ENSMUST00000211897 827 ntBASIC15.67■□□□□ 0.1
Cdk5rap1Q8BTW8 AL731706.1-201ENSMUST00000227806 944 ntAPPRIS ALT2 BASIC15.67■□□□□ 0.1
Cdk5rap1Q8BTW8 Gm9991-201ENSMUST00000070048 1207 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Cdk5rap1Q8BTW8 Spr-ps1-201ENSMUST00000089584 605 ntBASIC15.67■□□□□ 0.1
Cdk5rap1Q8BTW8 Atxn7-201ENSMUST00000022257 6853 ntAPPRIS P2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Cdk5rap1Q8BTW8 Ipo9-201ENSMUST00000041023 6247 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Cdk5rap1Q8BTW8 Fezf1-201ENSMUST00000031709 2409 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Cdk5rap1Q8BTW8 Eps8-201ENSMUST00000058210 4567 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Cdk5rap1Q8BTW8 Arhgef7-205ENSMUST00000110909 4926 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Cdk5rap1Q8BTW8 Bcl7b-203ENSMUST00000111188 1434 ntAPPRIS ALT1 TSL 5 BASIC15.67■□□□□ 0.1
Cdk5rap1Q8BTW8 Phtf1-203ENSMUST00000090685 3006 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Cdk5rap1Q8BTW8 Hoxc4-202ENSMUST00000165375 2121 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Cdk5rap1Q8BTW8 Vsig10l-204ENSMUST00000203769 2473 ntAPPRIS P2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Cdk5rap1Q8BTW8 Myo16-204ENSMUST00000208309 2462 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Cdk5rap1Q8BTW8 Pmm1-201ENSMUST00000023112 1300 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Cdk5rap1Q8BTW8 Pick1-206ENSMUST00000166155 1699 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Cdk5rap1Q8BTW8 Dnaja3-202ENSMUST00000115854 2505 ntAPPRIS ALT1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Cdk5rap1Q8BTW8 Dusp14-205ENSMUST00000164891 1454 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Cdk5rap1Q8BTW8 Zfp865-203ENSMUST00000085427 2751 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Cdk5rap1Q8BTW8 Bmp8a-201ENSMUST00000040496 2405 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
Cdk5rap1Q8BTW8 Ppp3cb-206ENSMUST00000161989 2322 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Cdk5rap1Q8BTW8 Casp9-201ENSMUST00000030747 3897 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Cdk5rap1Q8BTW8 Ap2a2-201ENSMUST00000003038 4646 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Cdk5rap1Q8BTW8 Fkrp-201ENSMUST00000061390 2827 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Cdk5rap1Q8BTW8 Gm15234-201ENSMUST00000141485 1058 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Cdk5rap1Q8BTW8 Pafah1b3-207ENSMUST00000155118 679 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Cdk5rap1Q8BTW8 Erdr1-203ENSMUST00000179077 887 ntAPPRIS ALT2 TSL 5 BASIC15.66■□□□□ 0.1
Cdk5rap1Q8BTW8 Ppib-201ENSMUST00000034947 892 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Cdk5rap1Q8BTW8 Cldn19-201ENSMUST00000084309 924 ntAPPRIS P4 TSL 1 (best) BASIC15.66■□□□□ 0.1
Cdk5rap1Q8BTW8 Serf2-201ENSMUST00000099475 525 ntTSL 2 BASIC15.66■□□□□ 0.1
Cdk5rap1Q8BTW8 Prodh-201ENSMUST00000003620 2385 ntAPPRIS P2 TSL 1 (best) BASIC15.66■□□□□ 0.1
Cdk5rap1Q8BTW8 Dok3-201ENSMUST00000047877 1546 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Cdk5rap1Q8BTW8 Coil-201ENSMUST00000036649 2607 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Cdk5rap1Q8BTW8 Lcmt2-201ENSMUST00000099486 2047 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Cdk5rap1Q8BTW8 Adgrb2-204ENSMUST00000106015 4982 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
Cdk5rap1Q8BTW8 Zbtb9-201ENSMUST00000120016 2798 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Cdk5rap1Q8BTW8 Ppme1-201ENSMUST00000032963 2772 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Cdk5rap1Q8BTW8 Stxbp5l-202ENSMUST00000114775 1691 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Cdk5rap1Q8BTW8 Krt73-201ENSMUST00000063292 2165 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Cdk5rap1Q8BTW8 Gm26568-201ENSMUST00000180496 1594 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Cdk5rap1Q8BTW8 Impdh1-210ENSMUST00000162739 2471 ntTSL 5 BASIC15.66■□□□□ 0.1
Cdk5rap1Q8BTW8 Gm43294-201ENSMUST00000202850 2490 ntBASIC15.66■□□□□ 0.1
Cdk5rap1Q8BTW8 Rps6ka1-202ENSMUST00000105894 3135 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Cdk5rap1Q8BTW8 Spdef-205ENSMUST00000167489 1708 ntAPPRIS P1 TSL 5 BASIC15.65■□□□□ 0.1
Retrieved 100 of 76,532 protein–RNA pairs in 40.4 ms