Protein–RNA interactions for Protein: Q8BP27

Sfr1, Swi5-dependent recombination DNA repair protein 1 homolog, mousemouse

Predictions only

Length 319 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sfr1Q8BP27 Slc38a10-202ENSMUST00000053692 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
Sfr1Q8BP27 Fbxo22-201ENSMUST00000034859 2112 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Sfr1Q8BP27 Letm1-203ENSMUST00000148451 2478 ntTSL 2 BASIC16.84■□□□□ 0.29
Sfr1Q8BP27 Parg-208ENSMUST00000170840 2894 ntAPPRIS ALT2 TSL 5 BASIC16.83■□□□□ 0.29
Sfr1Q8BP27 Eif4g3-205ENSMUST00000105831 6235 ntAPPRIS ALT2 TSL 5 BASIC16.83■□□□□ 0.29
Sfr1Q8BP27 Bambi-201ENSMUST00000025075 5040 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
Sfr1Q8BP27 Hist1h2bf-201ENSMUST00000105106 461 ntAPPRIS P1 BASIC16.83■□□□□ 0.28
Sfr1Q8BP27 Brpf1-202ENSMUST00000113119 4826 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
Sfr1Q8BP27 Hmg20b-204ENSMUST00000122993 1502 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Sfr1Q8BP27 Tubb6-201ENSMUST00000001513 1757 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Sfr1Q8BP27 Dab2-208ENSMUST00000160134 1374 ntAPPRIS ALT2 TSL 5 BASIC16.83■□□□□ 0.28
Sfr1Q8BP27 Trip10-201ENSMUST00000019631 2224 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
Sfr1Q8BP27 Ube2d1-201ENSMUST00000020085 1431 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Sfr1Q8BP27 Rab28-205ENSMUST00000202913 863 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Sfr1Q8BP27 Cnn1-203ENSMUST00000214601 1225 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Sfr1Q8BP27 Wnt10b-204ENSMUST00000226655 1807 ntBASIC16.83■□□□□ 0.28
Sfr1Q8BP27 Sox6os-201ENSMUST00000032900 420 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Sfr1Q8BP27 Ubfd1-201ENSMUST00000033158 4849 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Sfr1Q8BP27 Slc32a1-201ENSMUST00000045738 2797 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Sfr1Q8BP27 Trim7-201ENSMUST00000046903 2161 ntAPPRIS P1 TSL 5 BASIC16.83■□□□□ 0.28
Sfr1Q8BP27 Rilpl1-201ENSMUST00000062153 2249 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Sfr1Q8BP27 Mrpl49-201ENSMUST00000007482 1722 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Sfr1Q8BP27 Cnksr2-201ENSMUST00000026750 5738 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Sfr1Q8BP27 Mal-202ENSMUST00000028854 2778 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Sfr1Q8BP27 Dscr3-201ENSMUST00000023615 2547 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Sfr1Q8BP27 Zfp710-201ENSMUST00000049680 4721 ntAPPRIS P4 TSL 1 (best) BASIC16.82■□□□□ 0.28
Sfr1Q8BP27 3110002H16Rik-201ENSMUST00000025276 2170 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Sfr1Q8BP27 Eral1-201ENSMUST00000021183 2014 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Sfr1Q8BP27 Ppp2r2d-207ENSMUST00000155672 1938 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Sfr1Q8BP27 Zdhhc6-209ENSMUST00000225495 1711 ntBASIC16.82■□□□□ 0.28
Sfr1Q8BP27 Irf5-205ENSMUST00000167252 1693 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Sfr1Q8BP27 Atg4c-201ENSMUST00000030279 3178 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Sfr1Q8BP27 Chtf8-206ENSMUST00000177068 2931 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Sfr1Q8BP27 Igfbp2-201ENSMUST00000047328 1307 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Sfr1Q8BP27 Zmynd15-203ENSMUST00000108563 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Sfr1Q8BP27 Npb-202ENSMUST00000106194 530 ntAPPRIS ALT2 TSL 2 BASIC16.82■□□□□ 0.28
Sfr1Q8BP27 Npb-203ENSMUST00000106195 542 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
Sfr1Q8BP27 Bpnt1-202ENSMUST00000110965 1046 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Sfr1Q8BP27 Gm23634-201ENSMUST00000175071 91 ntBASIC16.82■□□□□ 0.28
Sfr1Q8BP27 Gm20033-201ENSMUST00000180470 572 ntTSL 3 BASIC16.82■□□□□ 0.28
Sfr1Q8BP27 Lamtor5-202ENSMUST00000199317 743 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Sfr1Q8BP27 Pgpep1-208ENSMUST00000211715 676 ntTSL 3 BASIC16.82■□□□□ 0.28
Sfr1Q8BP27 Snrnp35-201ENSMUST00000031349 1115 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Sfr1Q8BP27 Ptcra-201ENSMUST00000041012 1283 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Sfr1Q8BP27 Nudt1-201ENSMUST00000050205 954 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Sfr1Q8BP27 Pdcd2-201ENSMUST00000054450 1120 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Sfr1Q8BP27 Nudt1-202ENSMUST00000071881 952 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Sfr1Q8BP27 Dach1-201ENSMUST00000069334 5063 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Sfr1Q8BP27 Stum-201ENSMUST00000136521 6506 ntAPPRIS P2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Sfr1Q8BP27 Vps37a-201ENSMUST00000098817 6379 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Sfr1Q8BP27 F830208F22Rik-202ENSMUST00000143732 2891 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Sfr1Q8BP27 Piezo2-201ENSMUST00000046860 2849 ntTSL 5 BASIC16.82■□□□□ 0.28
Sfr1Q8BP27 Nisch-221ENSMUST00000171735 1763 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Sfr1Q8BP27 Erich2-201ENSMUST00000100041 1749 ntAPPRIS P2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Sfr1Q8BP27 Kcnk4-201ENSMUST00000025908 1715 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Sfr1Q8BP27 Plppr5-202ENSMUST00000106473 4294 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Sfr1Q8BP27 Bean1-201ENSMUST00000093245 3199 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Sfr1Q8BP27 Arhgef9-216ENSMUST00000197206 2227 ntTSL 5 BASIC16.81■□□□□ 0.28
Sfr1Q8BP27 Stk33-201ENSMUST00000090414 2221 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
Sfr1Q8BP27 Casp6-201ENSMUST00000029626 1456 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Sfr1Q8BP27 Gm9774-202ENSMUST00000192538 1392 ntAPPRIS P1 BASIC16.81■□□□□ 0.28
Sfr1Q8BP27 Spg21-202ENSMUST00000213957 1302 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Sfr1Q8BP27 Zpbp2-202ENSMUST00000081033 1300 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Sfr1Q8BP27 Brpf1-203ENSMUST00000113121 4603 ntAPPRIS ALT2 TSL 5 BASIC16.81■□□□□ 0.28
Sfr1Q8BP27 Rnf38-203ENSMUST00000102934 5240 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
Sfr1Q8BP27 Fnbp1-205ENSMUST00000113552 1910 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Sfr1Q8BP27 Tnfrsf13c-201ENSMUST00000089161 1906 ntAPPRIS P2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Sfr1Q8BP27 Spint2-202ENSMUST00000108236 1211 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Sfr1Q8BP27 Nxt1-202ENSMUST00000109961 1116 ntAPPRIS P1 TSL 2 BASIC16.81■□□□□ 0.28
Sfr1Q8BP27 Zfp629-206ENSMUST00000132524 215 ntTSL 5 BASIC16.81■□□□□ 0.28
Sfr1Q8BP27 Gm9013-201ENSMUST00000132939 882 ntBASIC16.81■□□□□ 0.28
Sfr1Q8BP27 Gm15545-203ENSMUST00000150613 1059 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Sfr1Q8BP27 Metrn-201ENSMUST00000002344 987 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
Sfr1Q8BP27 Nxt1-201ENSMUST00000047177 956 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Sfr1Q8BP27 Cdkn2c-201ENSMUST00000063531 1106 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Sfr1Q8BP27 C530025M09Rik-201ENSMUST00000099264 690 ntAPPRIS P1 BASIC16.81■□□□□ 0.28
Sfr1Q8BP27 Sh2b3-201ENSMUST00000040308 2530 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
Sfr1Q8BP27 Rbbp7-203ENSMUST00000112327 1862 ntTSL 5 BASIC16.81■□□□□ 0.28
Sfr1Q8BP27 Paqr9-201ENSMUST00000079597 8367 ntAPPRIS P1 BASIC16.81■□□□□ 0.28
Sfr1Q8BP27 Slc27a4-201ENSMUST00000080065 4054 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Sfr1Q8BP27 Gm42918-201ENSMUST00000199249 1580 ntBASIC16.81■□□□□ 0.28
Sfr1Q8BP27 Il9r-204ENSMUST00000142396 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Sfr1Q8BP27 Il6st-208ENSMUST00000184311 2985 ntAPPRIS P2 TSL 5 BASIC16.8■□□□□ 0.28
Sfr1Q8BP27 Phf7-203ENSMUST00000226565 1971 ntBASIC16.8■□□□□ 0.28
Sfr1Q8BP27 Gm26627-201ENSMUST00000181540 1487 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Sfr1Q8BP27 Disp3-201ENSMUST00000047720 5282 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
Sfr1Q8BP27 Gm16638-201ENSMUST00000148687 1865 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Sfr1Q8BP27 Yipf2-204ENSMUST00000213809 1883 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Sfr1Q8BP27 Slc6a8-206ENSMUST00000164449 2151 ntTSL 5 BASIC16.8■□□□□ 0.28
Sfr1Q8BP27 Gna12-201ENSMUST00000000153 3416 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Sfr1Q8BP27 Fndc11-202ENSMUST00000108835 1154 ntAPPRIS P1 TSL 2 BASIC16.8■□□□□ 0.28
Sfr1Q8BP27 Cdpf1-204ENSMUST00000144067 761 ntAPPRIS P1 TSL 2 BASIC16.8■□□□□ 0.28
Sfr1Q8BP27 Gm25016-201ENSMUST00000158399 131 ntBASIC16.8■□□□□ 0.28
Sfr1Q8BP27 Gm26827-201ENSMUST00000181911 148 ntTSL 5 BASIC16.8■□□□□ 0.28
Sfr1Q8BP27 Npw-201ENSMUST00000095544 638 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Sfr1Q8BP27 Crebzf-201ENSMUST00000061767 3376 ntAPPRIS P1 BASIC16.8■□□□□ 0.28
Sfr1Q8BP27 Unc13b-203ENSMUST00000107953 5034 ntAPPRIS ALT2 TSL 5 BASIC16.8■□□□□ 0.28
Sfr1Q8BP27 Gtf2h4-201ENSMUST00000001565 1679 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Sfr1Q8BP27 Msmo1-201ENSMUST00000034015 2044 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Sfr1Q8BP27 Enah-210ENSMUST00000193074 1971 ntAPPRIS ALT2 TSL 5 BASIC16.8■□□□□ 0.28
Retrieved 100 of 76,532 protein–RNA pairs in 19.7 ms