Protein–RNA interactions for Protein: Q80VA5

Sh3tc2, SH3 domain and tetratricopeptide repeat-containing protein 2, mousemouse

Predictions only

Length 1,289 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh3tc2Q80VA5 Esyt2-205ENSMUST00000220816 4287 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Sh3tc2Q80VA5 Dohh-202ENSMUST00000121047 946 ntTSL 2 BASIC17.99■□□□□ 0.47
Sh3tc2Q80VA5 Gm15677-201ENSMUST00000152302 766 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
Sh3tc2Q80VA5 Ctsg-201ENSMUST00000015583 1002 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Sh3tc2Q80VA5 Gm1818-201ENSMUST00000169406 1184 ntBASIC17.99■□□□□ 0.47
Sh3tc2Q80VA5 Gm27000-201ENSMUST00000182943 842 ntBASIC17.99■□□□□ 0.47
Sh3tc2Q80VA5 Gm9449-201ENSMUST00000207265 1011 ntBASIC17.99■□□□□ 0.47
Sh3tc2Q80VA5 Scly-201ENSMUST00000027532 2202 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Sh3tc2Q80VA5 Kcnq5-203ENSMUST00000115300 6975 ntAPPRIS ALT2 TSL 1 (best) BASIC17.99■□□□□ 0.47
Sh3tc2Q80VA5 Mmd-202ENSMUST00000107887 1654 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
Sh3tc2Q80VA5 Lrrfip2-202ENSMUST00000098340 3191 ntAPPRIS P2 TSL 1 (best) BASIC17.99■□□□□ 0.47
Sh3tc2Q80VA5 Nfe2l1-202ENSMUST00000107657 3869 ntAPPRIS P3 TSL 5 BASIC17.98■□□□□ 0.47
Sh3tc2Q80VA5 Helt-201ENSMUST00000058636 1541 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Sh3tc2Q80VA5 Ift74-202ENSMUST00000107104 1713 ntTSL 2 BASIC17.98■□□□□ 0.47
Sh3tc2Q80VA5 Axin1-203ENSMUST00000163421 2890 ntAPPRIS ALT2 TSL 5 BASIC17.98■□□□□ 0.47
Sh3tc2Q80VA5 Nfib-204ENSMUST00000107246 3075 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Sh3tc2Q80VA5 Rprd1b-207ENSMUST00000152452 1910 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Sh3tc2Q80VA5 Gbe1-206ENSMUST00000170464 2736 ntAPPRIS ALT2 TSL 5 BASIC17.98■□□□□ 0.47
Sh3tc2Q80VA5 Gm15372-201ENSMUST00000120729 834 ntBASIC17.98■□□□□ 0.47
Sh3tc2Q80VA5 Gm26549-201ENSMUST00000181112 1209 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Sh3tc2Q80VA5 AC161829.1-201ENSMUST00000220298 281 ntBASIC17.98■□□□□ 0.47
Sh3tc2Q80VA5 Ap1s1-201ENSMUST00000111080 1353 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Sh3tc2Q80VA5 Pomp-201ENSMUST00000031654 1579 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Sh3tc2Q80VA5 Phf7-203ENSMUST00000226565 1971 ntBASIC17.98■□□□□ 0.47
Sh3tc2Q80VA5 Ltbp4-202ENSMUST00000108369 5377 ntAPPRIS ALT2 TSL 5 BASIC17.98■□□□□ 0.47
Sh3tc2Q80VA5 Mamstr-201ENSMUST00000148532 1606 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Sh3tc2Q80VA5 Fam131b-201ENSMUST00000031891 4065 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Sh3tc2Q80VA5 Adnp-202ENSMUST00000088001 4932 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Sh3tc2Q80VA5 Rnf146-202ENSMUST00000160144 4323 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Sh3tc2Q80VA5 5031425F14Rik-201ENSMUST00000127920 2098 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
Sh3tc2Q80VA5 6330411D24Rik-201ENSMUST00000211105 1568 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
Sh3tc2Q80VA5 Arl11-201ENSMUST00000055159 1482 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Sh3tc2Q80VA5 Ager-201ENSMUST00000015596 1370 ntAPPRIS P3 TSL 1 (best) BASIC17.97■□□□□ 0.47
Sh3tc2Q80VA5 Tnnt1-203ENSMUST00000108587 1059 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
Sh3tc2Q80VA5 4933405L10Rik-201ENSMUST00000013302 1214 ntAPPRIS P2 TSL 1 (best) BASIC17.97■□□□□ 0.47
Sh3tc2Q80VA5 Timm23-201ENSMUST00000013845 1173 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Sh3tc2Q80VA5 Taco1os-201ENSMUST00000140736 644 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
Sh3tc2Q80VA5 Tsen15-201ENSMUST00000015124 1133 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Sh3tc2Q80VA5 Cox6c-205ENSMUST00000156915 606 ntAPPRIS P1 TSL 5 BASIC17.97■□□□□ 0.47
Sh3tc2Q80VA5 Gm27002-201ENSMUST00000182789 620 ntTSL 2 BASIC17.97■□□□□ 0.47
Sh3tc2Q80VA5 Dusp13-208ENSMUST00000183698 1019 ntTSL 5 BASIC17.97■□□□□ 0.47
Sh3tc2Q80VA5 1700001G17Rik-201ENSMUST00000191779 889 ntBASIC17.97■□□□□ 0.47
Sh3tc2Q80VA5 Rhoc-201ENSMUST00000002303 1202 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Sh3tc2Q80VA5 3110040N11Rik-201ENSMUST00000026092 887 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Sh3tc2Q80VA5 Ntrk1-201ENSMUST00000029712 2588 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Sh3tc2Q80VA5 Zdhhc24-201ENSMUST00000006632 2558 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Sh3tc2Q80VA5 2310022A10Rik-201ENSMUST00000067386 2701 ntAPPRIS P2 TSL 1 (best) BASIC17.97■□□□□ 0.47
Sh3tc2Q80VA5 Fiz1-203ENSMUST00000167804 2637 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Sh3tc2Q80VA5 Pik3r2-201ENSMUST00000034296 3165 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Sh3tc2Q80VA5 Acads-201ENSMUST00000031524 1870 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Sh3tc2Q80VA5 Nisch-221ENSMUST00000171735 1763 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Sh3tc2Q80VA5 Cep68-204ENSMUST00000162811 2788 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
Sh3tc2Q80VA5 Cacfd1-205ENSMUST00000114007 2689 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Sh3tc2Q80VA5 Bicc1-203ENSMUST00000143791 5431 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Sh3tc2Q80VA5 Stk35-202ENSMUST00000166282 5445 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Sh3tc2Q80VA5 Hoxc9-201ENSMUST00000001706 2374 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Sh3tc2Q80VA5 Ptpdc1-204ENSMUST00000222028 3164 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
Sh3tc2Q80VA5 Vps72-201ENSMUST00000009102 1456 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Sh3tc2Q80VA5 Wt1-205ENSMUST00000143043 3090 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
Sh3tc2Q80VA5 Ccdc105-201ENSMUST00000105383 1714 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Sh3tc2Q80VA5 Rps6ka1-202ENSMUST00000105894 3135 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Sh3tc2Q80VA5 Wdr90-205ENSMUST00000176923 5666 ntAPPRIS ALT2 TSL 5 BASIC17.96■□□□□ 0.47
Sh3tc2Q80VA5 Gm13186-201ENSMUST00000118031 316 ntBASIC17.96■□□□□ 0.47
Sh3tc2Q80VA5 Gm16272-201ENSMUST00000128218 388 ntTSL 2 BASIC17.96■□□□□ 0.47
Sh3tc2Q80VA5 Gm29629-201ENSMUST00000187926 386 ntTSL 3 BASIC17.96■□□□□ 0.47
Sh3tc2Q80VA5 Gm28402-201ENSMUST00000188574 373 ntTSL 3 BASIC17.96■□□□□ 0.47
Sh3tc2Q80VA5 Dcdc2c-201ENSMUST00000020963 1041 ntTSL 5 BASIC17.96■□□□□ 0.47
Sh3tc2Q80VA5 Cmtm5-203ENSMUST00000227441 610 ntBASIC17.96■□□□□ 0.47
Sh3tc2Q80VA5 Ppp1r27-201ENSMUST00000026121 771 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Sh3tc2Q80VA5 Med29-201ENSMUST00000003536 1281 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Sh3tc2Q80VA5 Nudt16l1-201ENSMUST00000050881 1269 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Sh3tc2Q80VA5 Rps4l-201ENSMUST00000071745 943 ntBASIC17.96■□□□□ 0.47
Sh3tc2Q80VA5 Meis2-202ENSMUST00000074285 2844 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Sh3tc2Q80VA5 Lrrc43-202ENSMUST00000121444 2016 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
Sh3tc2Q80VA5 Zmiz1-201ENSMUST00000007961 5397 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Sh3tc2Q80VA5 Nxnl1-201ENSMUST00000048243 2285 ntAPPRIS P1 TSL 2 BASIC17.96■□□□□ 0.47
Sh3tc2Q80VA5 Pgm3-202ENSMUST00000072585 1920 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Sh3tc2Q80VA5 Trabd-201ENSMUST00000081702 2439 ntAPPRIS P2 TSL 1 (best) BASIC17.96■□□□□ 0.46
Sh3tc2Q80VA5 Cux1-206ENSMUST00000176172 4882 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
Sh3tc2Q80VA5 Zic1-202ENSMUST00000065360 2811 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Sh3tc2Q80VA5 Mfsd13a-202ENSMUST00000128041 2223 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Sh3tc2Q80VA5 Dcaf12l2-201ENSMUST00000115057 2885 ntAPPRIS P1 BASIC17.95■□□□□ 0.46
Sh3tc2Q80VA5 Plppr4-201ENSMUST00000061071 5696 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Sh3tc2Q80VA5 Cyr61-201ENSMUST00000029846 2019 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Sh3tc2Q80VA5 Zfp746-201ENSMUST00000073124 3651 ntAPPRIS P3 TSL 1 (best) BASIC17.95■□□□□ 0.46
Sh3tc2Q80VA5 Otud5-202ENSMUST00000115665 3821 ntTSL 5 BASIC17.95■□□□□ 0.46
Sh3tc2Q80VA5 Lat-206ENSMUST00000206793 1215 ntAPPRIS ALT2 TSL 5 BASIC17.95■□□□□ 0.46
Sh3tc2Q80VA5 AC108846.1-201ENSMUST00000214531 513 ntBASIC17.95■□□□□ 0.46
Sh3tc2Q80VA5 Gm5145-201ENSMUST00000095633 837 ntAPPRIS P1 BASIC17.95■□□□□ 0.46
Sh3tc2Q80VA5 Ppp2r2d-207ENSMUST00000155672 1938 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Sh3tc2Q80VA5 Mink1-202ENSMUST00000072873 4610 ntAPPRIS ALT2 TSL 5 BASIC17.95■□□□□ 0.46
Sh3tc2Q80VA5 Zfp92-202ENSMUST00000086470 2050 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Sh3tc2Q80VA5 Rmdn3-201ENSMUST00000094695 2249 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Sh3tc2Q80VA5 Synm-205ENSMUST00000208815 2697 ntAPPRIS ALT2 TSL 5 BASIC17.95■□□□□ 0.46
Sh3tc2Q80VA5 Cadm1-204ENSMUST00000114548 4482 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
Sh3tc2Q80VA5 Dbn1-202ENSMUST00000109921 2378 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
Sh3tc2Q80VA5 Pitpnm1-201ENSMUST00000049658 4206 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Sh3tc2Q80VA5 Sdhb-201ENSMUST00000010007 1142 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Sh3tc2Q80VA5 Tmem254c-202ENSMUST00000100819 1211 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Sh3tc2Q80VA5 Cldn7-203ENSMUST00000108596 664 ntTSL 3 BASIC17.94■□□□□ 0.46
Retrieved 100 of 76,532 protein–RNA pairs in 22.7 ms