Protein–RNA interactions for Protein: Q6PDJ1

Cachd1, VWFA and cache domain-containing protein 1, mousemouse

Predictions only

Length 1,288 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cachd1Q6PDJ1 H2-DMa-201ENSMUST00000042121 1555 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Cachd1Q6PDJ1 Tjp1-202ENSMUST00000102592 7049 ntAPPRIS P3 TSL 1 (best) BASIC16.68■□□□□ 0.26
Cachd1Q6PDJ1 Rgp1-203ENSMUST00000117140 1635 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Cachd1Q6PDJ1 Krt77-201ENSMUST00000087996 2930 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Cachd1Q6PDJ1 4930452B06Rik-201ENSMUST00000102996 2681 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Cachd1Q6PDJ1 U2af2-201ENSMUST00000005041 2183 ntAPPRIS ALT1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Cachd1Q6PDJ1 Pqlc1-201ENSMUST00000070135 1911 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
Cachd1Q6PDJ1 Mrps18c-203ENSMUST00000112901 820 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
Cachd1Q6PDJ1 Gm13418-201ENSMUST00000119097 944 ntBASIC16.67■□□□□ 0.26
Cachd1Q6PDJ1 Gm14493-201ENSMUST00000141174 543 ntTSL 5 BASIC16.67■□□□□ 0.26
Cachd1Q6PDJ1 Apopt1-204ENSMUST00000163220 671 ntAPPRIS ALT2 TSL 2 BASIC16.67■□□□□ 0.26
Cachd1Q6PDJ1 Gm17271-201ENSMUST00000165535 355 ntBASIC16.67■□□□□ 0.26
Cachd1Q6PDJ1 Jpx-202ENSMUST00000182447 712 ntTSL 3 BASIC16.67■□□□□ 0.26
Cachd1Q6PDJ1 Aurkaip1-201ENSMUST00000084097 1159 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Cachd1Q6PDJ1 C920006O11Rik-201ENSMUST00000180974 1444 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Cachd1Q6PDJ1 Gm15558-201ENSMUST00000126849 2018 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Cachd1Q6PDJ1 Sapcd2-202ENSMUST00000100323 1761 ntAPPRIS ALT2 TSL 2 BASIC16.66■□□□□ 0.26
Cachd1Q6PDJ1 Agap3-205ENSMUST00000199856 2685 ntTSL 5 BASIC16.66■□□□□ 0.26
Cachd1Q6PDJ1 U2af2-202ENSMUST00000165399 1810 ntTSL 5 BASIC16.66■□□□□ 0.26
Cachd1Q6PDJ1 Atp2a2-201ENSMUST00000031423 4486 ntAPPRIS P4 TSL 1 (best) BASIC16.66■□□□□ 0.26
Cachd1Q6PDJ1 Camk2d-228ENSMUST00000200171 5396 ntTSL 5 BASIC16.66■□□□□ 0.26
Cachd1Q6PDJ1 Cntln-201ENSMUST00000047023 5528 ntAPPRIS ALT2 TSL 5 BASIC16.66■□□□□ 0.26
Cachd1Q6PDJ1 Cldn7-203ENSMUST00000108596 664 ntTSL 3 BASIC16.66■□□□□ 0.26
Cachd1Q6PDJ1 Schip1-203ENSMUST00000170788 1730 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Cachd1Q6PDJ1 Gm10142-201ENSMUST00000179767 363 ntAPPRIS P1 BASIC16.66■□□□□ 0.26
Cachd1Q6PDJ1 Thap4-205ENSMUST00000189728 713 ntTSL 2 BASIC16.66■□□□□ 0.26
Cachd1Q6PDJ1 Gm26646-202ENSMUST00000205705 439 ntTSL 5 BASIC16.66■□□□□ 0.26
Cachd1Q6PDJ1 Gpr180-201ENSMUST00000022728 1875 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Cachd1Q6PDJ1 Sod1-201ENSMUST00000023707 646 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Cachd1Q6PDJ1 Med8-202ENSMUST00000073881 1052 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Cachd1Q6PDJ1 Kcns2-201ENSMUST00000072868 5456 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Cachd1Q6PDJ1 Gm26795-201ENSMUST00000180993 1952 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Cachd1Q6PDJ1 Ssx2ip-204ENSMUST00000106153 3446 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
Cachd1Q6PDJ1 Adam22-205ENSMUST00000115385 2318 ntTSL 2 BASIC16.65■□□□□ 0.26
Cachd1Q6PDJ1 Rdx-202ENSMUST00000061352 1502 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Cachd1Q6PDJ1 Grk6-206ENSMUST00000224995 2971 ntBASIC16.65■□□□□ 0.26
Cachd1Q6PDJ1 P2rx5-201ENSMUST00000006104 2395 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Cachd1Q6PDJ1 Ddx41-201ENSMUST00000021956 2205 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Cachd1Q6PDJ1 Tgds-204ENSMUST00000228543 1594 ntBASIC16.65■□□□□ 0.26
Cachd1Q6PDJ1 Usp48-201ENSMUST00000055131 5722 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Cachd1Q6PDJ1 Adk-201ENSMUST00000045376 1782 ntAPPRIS P2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Cachd1Q6PDJ1 Gm13830-201ENSMUST00000124378 417 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Cachd1Q6PDJ1 Vps53-204ENSMUST00000129256 650 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Cachd1Q6PDJ1 Washc3-203ENSMUST00000182183 838 ntAPPRIS ALT2 TSL 2 BASIC16.65■□□□□ 0.26
Cachd1Q6PDJ1 Ube2f-210ENSMUST00000191368 1110 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Cachd1Q6PDJ1 Sbk2-201ENSMUST00000032598 1139 ntAPPRIS P1 TSL 3 BASIC16.65■□□□□ 0.26
Cachd1Q6PDJ1 Gm5519-201ENSMUST00000042061 513 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Cachd1Q6PDJ1 Chmp2a-201ENSMUST00000005711 949 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Cachd1Q6PDJ1 Timm10b-201ENSMUST00000058333 694 ntAPPRIS P2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Cachd1Q6PDJ1 Ddx39b-203ENSMUST00000173731 2848 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Cachd1Q6PDJ1 Hpn-202ENSMUST00000108102 1830 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Cachd1Q6PDJ1 Hhat-203ENSMUST00000128619 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Cachd1Q6PDJ1 Slc47a2-201ENSMUST00000093029 2377 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Cachd1Q6PDJ1 Il4i1-201ENSMUST00000033015 2048 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
Cachd1Q6PDJ1 Gm10575-201ENSMUST00000097947 1671 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Cachd1Q6PDJ1 Picalm-206ENSMUST00000207484 8209 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
Cachd1Q6PDJ1 Wac-207ENSMUST00000167020 5208 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
Cachd1Q6PDJ1 Zkscan4-202ENSMUST00000225845 1506 ntBASIC16.65■□□□□ 0.26
Cachd1Q6PDJ1 Oxct2b-201ENSMUST00000102648 1735 ntAPPRIS P1 BASIC16.65■□□□□ 0.26
Cachd1Q6PDJ1 Chmp6-201ENSMUST00000026434 1557 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Cachd1Q6PDJ1 Slc16a10-202ENSMUST00000213488 2325 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Cachd1Q6PDJ1 Tra2a-204ENSMUST00000204189 1777 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
Cachd1Q6PDJ1 Krt80-201ENSMUST00000077196 1774 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Cachd1Q6PDJ1 St8sia5-202ENSMUST00000079618 1989 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Cachd1Q6PDJ1 Ache-202ENSMUST00000085934 2176 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Cachd1Q6PDJ1 Rnf44-204ENSMUST00000125871 4292 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Cachd1Q6PDJ1 Pex14-201ENSMUST00000103217 2006 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Cachd1Q6PDJ1 Vps25-203ENSMUST00000100414 1220 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Cachd1Q6PDJ1 Tmed5-204ENSMUST00000118036 1045 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Cachd1Q6PDJ1 Hmgb1-208ENSMUST00000139443 923 ntTSL 2 BASIC16.64■□□□□ 0.25
Cachd1Q6PDJ1 1700023H06Rik-201ENSMUST00000161006 1044 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Cachd1Q6PDJ1 Coa3-201ENSMUST00000017332 886 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Cachd1Q6PDJ1 Gm5866-201ENSMUST00000177881 973 ntBASIC16.64■□□□□ 0.25
Cachd1Q6PDJ1 Gm21887-203ENSMUST00000180251 531 ntAPPRIS P5 TSL 5 BASIC16.64■□□□□ 0.25
Cachd1Q6PDJ1 Gm43433-201ENSMUST00000196573 481 ntBASIC16.64■□□□□ 0.25
Cachd1Q6PDJ1 Prrg2-207ENSMUST00000210500 922 ntAPPRIS ALT2 TSL 5 BASIC16.64■□□□□ 0.25
Cachd1Q6PDJ1 Rpl10-ps2-201ENSMUST00000098432 645 ntBASIC16.64■□□□□ 0.25
Cachd1Q6PDJ1 Mrm1-201ENSMUST00000018549 2477 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Cachd1Q6PDJ1 Rbm24-201ENSMUST00000037923 3086 ntAPPRIS P1 TSL 2 BASIC16.64■□□□□ 0.25
Cachd1Q6PDJ1 Ubr3-202ENSMUST00000112251 8081 ntAPPRIS ALT2 TSL 5 BASIC16.64■□□□□ 0.25
Cachd1Q6PDJ1 2410002F23Rik-217ENSMUST00000188111 2131 ntAPPRIS P2 TSL 2 BASIC16.64■□□□□ 0.25
Cachd1Q6PDJ1 Nfatc3-201ENSMUST00000109308 5984 ntAPPRIS P2 TSL 1 (best) BASIC16.64■□□□□ 0.25
Cachd1Q6PDJ1 Gm3488-202ENSMUST00000181562 1945 ntAPPRIS P5 TSL 5 BASIC16.64■□□□□ 0.25
Cachd1Q6PDJ1 AC163637.2-201ENSMUST00000213826 1945 ntAPPRIS P1 TSL 2 BASIC16.64■□□□□ 0.25
Cachd1Q6PDJ1 Itsn1-201ENSMUST00000056482 5364 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Cachd1Q6PDJ1 A930029G22Rik-201ENSMUST00000181032 1710 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Cachd1Q6PDJ1 Gm26675-201ENSMUST00000181068 1525 ntTSL 5 BASIC16.64■□□□□ 0.25
Cachd1Q6PDJ1 4921511I17Rik-201ENSMUST00000220545 1341 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Cachd1Q6PDJ1 Cacnb1-204ENSMUST00000107561 1778 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Cachd1Q6PDJ1 Haus4-201ENSMUST00000022784 1587 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Cachd1Q6PDJ1 Cd40-202ENSMUST00000073707 1596 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
Cachd1Q6PDJ1 Gabra4-205ENSMUST00000199357 2407 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
Cachd1Q6PDJ1 Ebf3-204ENSMUST00000169486 4994 ntAPPRIS ALT1 TSL 5 BASIC16.64■□□□□ 0.25
Cachd1Q6PDJ1 Mzt1-201ENSMUST00000042662 2240 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Cachd1Q6PDJ1 Kcnn1-207ENSMUST00000212509 1608 ntAPPRIS ALT2 TSL 5 BASIC16.63■□□□□ 0.25
Cachd1Q6PDJ1 2310022A10Rik-201ENSMUST00000067386 2701 ntAPPRIS P2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Cachd1Q6PDJ1 A730060N03Rik-201ENSMUST00000174277 2124 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Cachd1Q6PDJ1 Baiap2-202ENSMUST00000075180 3518 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Cachd1Q6PDJ1 Efcab8-203ENSMUST00000175856 1703 ntAPPRIS ALT2 TSL 2 BASIC16.63■□□□□ 0.25
Cachd1Q6PDJ1 Mrpl40-202ENSMUST00000119273 778 ntTSL 3 BASIC16.63■□□□□ 0.25
Retrieved 100 of 76,532 protein–RNA pairs in 42.5 ms