Protein–RNA interactions for Protein: Q64338

Pde1c, Calcium/calmodulin-dependent 3',5'-cyclic nucleotide phosphodiesterase 1C, mousemouse

Predictions only

Length 706 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pde1cQ64338 Bicdl1-201ENSMUST00000055408 3026 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Pde1cQ64338 Cacna1i-202ENSMUST00000160424 9781 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Pde1cQ64338 Aspscr1-205ENSMUST00000106160 1550 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Pde1cQ64338 Atp6v1b1-206ENSMUST00000206911 1591 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Pde1cQ64338 Msl1-201ENSMUST00000037915 4593 ntAPPRIS P2 TSL 1 (best) BASIC18.18■□□□□ 0.5
Pde1cQ64338 Chrna4-201ENSMUST00000067120 4565 ntAPPRIS P2 TSL 1 (best) BASIC18.18■□□□□ 0.5
Pde1cQ64338 Tspan9-201ENSMUST00000032503 1405 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Pde1cQ64338 Six3os1-212ENSMUST00000177220 5601 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Pde1cQ64338 Mdga1-208ENSMUST00000171691 8339 ntAPPRIS ALT2 TSL 5 BASIC18.18■□□□□ 0.5
Pde1cQ64338 Inppl1-201ENSMUST00000035836 4995 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Pde1cQ64338 Crct1-202ENSMUST00000107301 460 ntAPPRIS P1 TSL 2 BASIC18.18■□□□□ 0.5
Pde1cQ64338 4732471J01Rik-202ENSMUST00000205787 991 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Pde1cQ64338 4930448E22Rik-202ENSMUST00000215242 2102 ntTSL 5 BASIC18.18■□□□□ 0.5
Pde1cQ64338 Ric3-202ENSMUST00000120876 1633 ntAPPRIS ALT1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Pde1cQ64338 Kcnn1-201ENSMUST00000110078 4047 ntAPPRIS P2 TSL 1 (best) BASIC18.18■□□□□ 0.5
Pde1cQ64338 Kcnn1-202ENSMUST00000110081 4045 ntAPPRIS ALT2 TSL 5 BASIC18.18■□□□□ 0.5
Pde1cQ64338 Mmd-201ENSMUST00000004050 2677 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Pde1cQ64338 Lrrc7-204ENSMUST00000199890 6326 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Pde1cQ64338 Gabbr1-202ENSMUST00000172789 1460 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Pde1cQ64338 Ttc13-202ENSMUST00000117624 3096 ntTSL 5 BASIC18.18■□□□□ 0.5
Pde1cQ64338 2210016F16Rik-201ENSMUST00000022032 3051 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Pde1cQ64338 Eral1-201ENSMUST00000021183 2014 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Pde1cQ64338 Mpdu1-201ENSMUST00000018905 1321 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Pde1cQ64338 Mapk8ip3-205ENSMUST00000119115 4173 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
Pde1cQ64338 Tex261-201ENSMUST00000014892 2984 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Pde1cQ64338 Trim8-201ENSMUST00000026008 3230 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Pde1cQ64338 Mettl21a-201ENSMUST00000053469 2666 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Pde1cQ64338 Ctnna2-205ENSMUST00000161846 4018 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Pde1cQ64338 Tmem183a-201ENSMUST00000049470 3149 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Pde1cQ64338 Bcam-201ENSMUST00000003061 2429 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Pde1cQ64338 Pih1d2-201ENSMUST00000000171 1256 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Pde1cQ64338 Gm4217-201ENSMUST00000182243 1002 ntBASIC18.17■□□□□ 0.5
Pde1cQ64338 Gadd45b-203ENSMUST00000220246 732 ntTSL 2 BASIC18.17■□□□□ 0.5
Pde1cQ64338 Pcsk6-201ENSMUST00000055576 4405 ntAPPRIS P3 TSL 5 BASIC18.17■□□□□ 0.5
Pde1cQ64338 Prr5l-201ENSMUST00000043845 2290 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Pde1cQ64338 Appl1-201ENSMUST00000036570 7642 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Pde1cQ64338 Bloc1s3-201ENSMUST00000077408 3188 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Pde1cQ64338 Usp43-202ENSMUST00000108677 4447 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
Pde1cQ64338 Tia1-203ENSMUST00000095754 1789 ntAPPRIS ALT1 TSL 5 BASIC18.17■□□□□ 0.5
Pde1cQ64338 Slc35f1-201ENSMUST00000105473 4941 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Pde1cQ64338 Pld2-203ENSMUST00000108557 3655 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
Pde1cQ64338 Atp1a1-201ENSMUST00000036493 3679 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Pde1cQ64338 Slain1-201ENSMUST00000069443 2863 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Pde1cQ64338 Plekha4-206ENSMUST00000211155 2044 ntAPPRIS ALT2 TSL 5 BASIC18.16■□□□□ 0.5
Pde1cQ64338 Gm26821-201ENSMUST00000181954 2652 ntTSL 5 BASIC18.16■□□□□ 0.5
Pde1cQ64338 5031425F14Rik-201ENSMUST00000127920 2098 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Pde1cQ64338 Mmp28-201ENSMUST00000021020 2311 ntAPPRIS P4 TSL 1 (best) BASIC18.16■□□□□ 0.5
Pde1cQ64338 Efr3a-201ENSMUST00000015146 5215 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Pde1cQ64338 Cdon-202ENSMUST00000119129 7503 ntAPPRIS P1 TSL 5 BASIC18.16■□□□□ 0.5
Pde1cQ64338 Dsg2-201ENSMUST00000059787 5766 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Pde1cQ64338 Hps5-202ENSMUST00000107653 4702 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
Pde1cQ64338 Prickle4-201ENSMUST00000113299 990 ntTSL 5 BASIC18.16■□□□□ 0.5
Pde1cQ64338 Prickle4-202ENSMUST00000113300 1110 ntAPPRIS P1 TSL 5 BASIC18.16■□□□□ 0.5
Pde1cQ64338 Gm17661-201ENSMUST00000170317 270 ntBASIC18.16■□□□□ 0.5
Pde1cQ64338 Mir5130-201ENSMUST00000175160 84 ntBASIC18.16■□□□□ 0.5
Pde1cQ64338 Pigf-201ENSMUST00000024957 988 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Pde1cQ64338 Banf1-201ENSMUST00000025762 735 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Pde1cQ64338 Hist3h2ba-201ENSMUST00000078267 614 ntAPPRIS P1 BASIC18.16■□□□□ 0.5
Pde1cQ64338 3110070M22Rik-201ENSMUST00000099148 1123 ntAPPRIS P1 BASIC18.16■□□□□ 0.5
Pde1cQ64338 Aurkb-201ENSMUST00000021277 1950 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Pde1cQ64338 St3gal3-203ENSMUST00000106410 2225 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Pde1cQ64338 Nagpa-203ENSMUST00000147567 2230 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
Pde1cQ64338 Chuk-202ENSMUST00000119591 3481 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Pde1cQ64338 Pdlim5-211ENSMUST00000198381 1555 ntAPPRIS ALT2 TSL 5 BASIC18.16■□□□□ 0.5
Pde1cQ64338 Plac9a-201ENSMUST00000052286 1555 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Pde1cQ64338 Txndc11-201ENSMUST00000038424 3095 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Pde1cQ64338 Simc1-201ENSMUST00000118072 2116 ntAPPRIS ALT2 TSL 5 BASIC18.16■□□□□ 0.5
Pde1cQ64338 Mrpl57-201ENSMUST00000022538 2877 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Pde1cQ64338 Slc25a3-201ENSMUST00000076694 1612 ntAPPRIS P2 TSL 1 (best) BASIC18.16■□□□□ 0.5
Pde1cQ64338 Git2-215ENSMUST00000178440 4944 ntTSL 5 BASIC18.16■□□□□ 0.5
Pde1cQ64338 Git2-201ENSMUST00000043283 4938 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Pde1cQ64338 1810041L15Rik-203ENSMUST00000189248 5296 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Pde1cQ64338 Tmem233-201ENSMUST00000111997 2477 ntAPPRIS P1 TSL 2 BASIC18.15■□□□□ 0.5
Pde1cQ64338 Rhof-201ENSMUST00000031401 2208 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Pde1cQ64338 Gpd2-202ENSMUST00000112618 5759 ntTSL 5 BASIC18.15■□□□□ 0.5
Pde1cQ64338 Gpc1-201ENSMUST00000045970 4176 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Pde1cQ64338 Rwdd2b-201ENSMUST00000039101 2009 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Pde1cQ64338 Vps53-202ENSMUST00000094015 2645 ntTSL 5 BASIC18.15■□□□□ 0.5
Pde1cQ64338 Tmem47-203ENSMUST00000171953 1801 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Pde1cQ64338 Ptf1aos-201ENSMUST00000122978 916 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Pde1cQ64338 U2af1-201ENSMUST00000014684 907 ntAPPRIS P3 TSL 1 (best) BASIC18.15■□□□□ 0.5
Pde1cQ64338 U2af1-202ENSMUST00000166526 907 ntAPPRIS ALT2 TSL 2 BASIC18.15■□□□□ 0.5
Pde1cQ64338 Gm45058-201ENSMUST00000205810 766 ntBASIC18.15■□□□□ 0.5
Pde1cQ64338 AC120002.2-201ENSMUST00000220205 773 ntBASIC18.15■□□□□ 0.5
Pde1cQ64338 Il3ra-202ENSMUST00000223589 738 ntBASIC18.15■□□□□ 0.5
Pde1cQ64338 Fgf8-201ENSMUST00000026240 1117 ntAPPRIS P4 TSL 1 (best) BASIC18.15■□□□□ 0.5
Pde1cQ64338 Gng11-201ENSMUST00000031670 919 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Pde1cQ64338 Snx12-201ENSMUST00000077876 1002 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Pde1cQ64338 P2rx4-201ENSMUST00000031429 2702 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Pde1cQ64338 Rtkn-201ENSMUST00000065512 2191 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
Pde1cQ64338 Thegl-202ENSMUST00000117880 1641 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Pde1cQ64338 Trp73-203ENSMUST00000105643 1916 ntAPPRIS ALT2 TSL 5 BASIC18.15■□□□□ 0.5
Pde1cQ64338 Sphk1-202ENSMUST00000063446 2527 ntAPPRIS ALT2 TSL 2 BASIC18.15■□□□□ 0.5
Pde1cQ64338 Eml2-201ENSMUST00000048502 2275 ntAPPRIS P3 TSL 1 (best) BASIC18.15■□□□□ 0.5
Pde1cQ64338 Negr1-203ENSMUST00000106065 1953 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Pde1cQ64338 Lrig2-207ENSMUST00000199070 5991 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Pde1cQ64338 Zkscan3-208ENSMUST00000224820 5398 ntBASIC18.15■□□□□ 0.5
Pde1cQ64338 A930029G22Rik-201ENSMUST00000181032 1710 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Pde1cQ64338 Rgl1-202ENSMUST00000111857 3037 ntTSL 5 BASIC18.15■□□□□ 0.5
Pde1cQ64338 Phf1-201ENSMUST00000073724 2429 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
Retrieved 100 of 76,532 protein–RNA pairs in 38.7 ms