Protein–RNA interactions for Protein: Q62442

Vamp1, Vesicle-associated membrane protein 1, mousemouse

Predictions only

Length 118 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vamp1Q62442 Ssu72-201ENSMUST00000030905 1472 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Vamp1Q62442 Trank1-201ENSMUST00000078626 10520 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
Vamp1Q62442 Dpep3-201ENSMUST00000034371 1698 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Vamp1Q62442 Ube2o-201ENSMUST00000082152 5205 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Vamp1Q62442 Hnrnpl-202ENSMUST00000172529 1898 ntTSL 5 BASIC14.22□□□□□ -0.13
Vamp1Q62442 Agbl3-204ENSMUST00000115016 3734 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Vamp1Q62442 Wwc2-201ENSMUST00000057561 8678 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Vamp1Q62442 Kcnq2-204ENSMUST00000103047 2899 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Vamp1Q62442 Ngb-201ENSMUST00000021420 1616 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
Vamp1Q62442 Foxp4-202ENSMUST00000113262 3198 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Vamp1Q62442 Aptx-203ENSMUST00000108103 2391 ntAPPRIS ALT2 TSL 5 BASIC14.22□□□□□ -0.13
Vamp1Q62442 Tjap1-214ENSMUST00000225413 2189 ntAPPRIS ALT2 BASIC14.22□□□□□ -0.13
Vamp1Q62442 6330411D24Rik-201ENSMUST00000211105 1568 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Vamp1Q62442 Gdf15-202ENSMUST00000110103 1380 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Vamp1Q62442 Slc24a4-202ENSMUST00000159329 4465 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
Vamp1Q62442 Celf3-208ENSMUST00000198316 2505 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Vamp1Q62442 Gprc5c-203ENSMUST00000122967 1709 ntTSL 5 BASIC14.21□□□□□ -0.13
Vamp1Q62442 Fosl1-201ENSMUST00000025850 1707 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Vamp1Q62442 Pcyt1a-202ENSMUST00000104893 4951 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.13
Vamp1Q62442 Fancm-201ENSMUST00000058889 7775 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Vamp1Q62442 Tubb4b-ps1-201ENSMUST00000179460 1336 ntBASIC14.21□□□□□ -0.13
Vamp1Q62442 4932422M17Rik-201ENSMUST00000195992 2639 ntBASIC14.21□□□□□ -0.13
Vamp1Q62442 Sybu-209ENSMUST00000228639 4113 ntBASIC14.21□□□□□ -0.13
Vamp1Q62442 Bcs1l-202ENSMUST00000113732 1679 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.13
Vamp1Q62442 Tm7sf2-202ENSMUST00000113543 1498 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Vamp1Q62442 Sec14l1-203ENSMUST00000103026 2589 ntAPPRIS ALT2 TSL 5 BASIC14.21□□□□□ -0.13
Vamp1Q62442 Lrrfip2-207ENSMUST00000197256 1819 ntTSL 5 BASIC14.21□□□□□ -0.13
Vamp1Q62442 Dip2b-202ENSMUST00000100203 8914 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Vamp1Q62442 Gm2399-201ENSMUST00000104944 225 ntBASIC14.21□□□□□ -0.13
Vamp1Q62442 Syce3-201ENSMUST00000109314 448 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Vamp1Q62442 1810059C17Rik-201ENSMUST00000125173 487 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Vamp1Q62442 Sox8-202ENSMUST00000173447 928 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
Vamp1Q62442 Gm39115-201ENSMUST00000211350 699 ntAPPRIS P1 BASIC14.21□□□□□ -0.13
Vamp1Q62442 Ap3s1-204ENSMUST00000225520 957 ntBASIC14.21□□□□□ -0.13
Vamp1Q62442 1700012B09Rik-201ENSMUST00000060330 688 ntAPPRIS P2 TSL 1 (best) BASIC14.21□□□□□ -0.13
Vamp1Q62442 Runx2-202ENSMUST00000113571 5898 ntAPPRIS P3 TSL 5 BASIC14.21□□□□□ -0.13
Vamp1Q62442 Sh3yl1-201ENSMUST00000020997 1750 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.13
Vamp1Q62442 Kifc3-212ENSMUST00000213004 2453 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
Vamp1Q62442 Gemin5-202ENSMUST00000102711 4919 ntAPPRIS ALT2 TSL 5 BASIC14.21□□□□□ -0.14
Vamp1Q62442 Rbm4-206ENSMUST00000180248 2610 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Vamp1Q62442 Fdxr-201ENSMUST00000021078 1948 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Vamp1Q62442 Cog8-201ENSMUST00000034391 2954 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Vamp1Q62442 Cspg5-204ENSMUST00000197850 7868 ntAPPRIS ALT2 TSL 5 BASIC14.21□□□□□ -0.14
Vamp1Q62442 Zfp648-201ENSMUST00000086195 1892 ntAPPRIS P1 TSL 3 BASIC14.21□□□□□ -0.14
Vamp1Q62442 Chst8-201ENSMUST00000078686 2372 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Vamp1Q62442 Otp-201ENSMUST00000022195 2656 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Vamp1Q62442 Nkx2-1-201ENSMUST00000001536 2809 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Vamp1Q62442 Mtif3-201ENSMUST00000016654 2131 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Vamp1Q62442 H2-Q4-201ENSMUST00000081435 1793 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Vamp1Q62442 Dmpk-202ENSMUST00000108473 2588 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Vamp1Q62442 Tomm6-202ENSMUST00000113302 749 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Vamp1Q62442 2700033N17Rik-201ENSMUST00000140185 721 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Vamp1Q62442 Mir2861-201ENSMUST00000175539 82 ntBASIC14.2□□□□□ -0.14
Vamp1Q62442 Foxk1-202ENSMUST00000198422 687 ntTSL 3 BASIC14.2□□□□□ -0.14
Vamp1Q62442 Crk-201ENSMUST00000017920 3642 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Vamp1Q62442 Rrp9-201ENSMUST00000047721 1586 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Vamp1Q62442 Pde4d-207ENSMUST00000120664 4207 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Vamp1Q62442 1700034J05Rik-202ENSMUST00000111622 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Vamp1Q62442 Tap1-201ENSMUST00000041633 2614 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Vamp1Q62442 Taf5l-201ENSMUST00000093039 2912 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Vamp1Q62442 Pgap3-202ENSMUST00000090827 2419 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Vamp1Q62442 Prpf3-207ENSMUST00000161476 2732 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Vamp1Q62442 Tmcc3-201ENSMUST00000065060 5530 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Vamp1Q62442 Hira-202ENSMUST00000120532 2063 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Vamp1Q62442 Dnal4-201ENSMUST00000023055 1469 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Vamp1Q62442 Cdk18-201ENSMUST00000027697 4355 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Vamp1Q62442 Mccc1-201ENSMUST00000029259 2455 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Vamp1Q62442 Zfp423-202ENSMUST00000109655 4907 ntAPPRIS P2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Vamp1Q62442 Slc35a1-201ENSMUST00000029970 2039 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Vamp1Q62442 C130074G19Rik-201ENSMUST00000048308 3035 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Vamp1Q62442 Myo9b-203ENSMUST00000170242 7297 ntAPPRIS ALT2 TSL 5 BASIC14.19□□□□□ -0.14
Vamp1Q62442 Fbxl21-202ENSMUST00000121095 798 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Vamp1Q62442 Gm20421-201ENSMUST00000153344 672 ntTSL 3 BASIC14.19□□□□□ -0.14
Vamp1Q62442 Dtd2-202ENSMUST00000085404 1012 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Vamp1Q62442 Zfp783-201ENSMUST00000095946 670 ntBASIC14.19□□□□□ -0.14
Vamp1Q62442 Ak3-201ENSMUST00000025696 2809 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Vamp1Q62442 Trappc5-201ENSMUST00000044857 2546 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Vamp1Q62442 Dnajc6-205ENSMUST00000106933 5191 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Vamp1Q62442 Mapt-202ENSMUST00000106988 2202 ntAPPRIS ALT2 TSL 5 BASIC14.19□□□□□ -0.14
Vamp1Q62442 Prkag2-203ENSMUST00000114975 2205 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Vamp1Q62442 3110062M04Rik-202ENSMUST00000115006 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Vamp1Q62442 Snapc2-201ENSMUST00000011981 1536 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Vamp1Q62442 Tmem267-205ENSMUST00000223912 1789 ntAPPRIS P1 BASIC14.19□□□□□ -0.14
Vamp1Q62442 Car2-201ENSMUST00000029078 1788 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Vamp1Q62442 Slc39a9-204ENSMUST00000217889 2155 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Vamp1Q62442 Htatsf1-201ENSMUST00000088652 2810 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Vamp1Q62442 Idnk-202ENSMUST00000109868 1462 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Vamp1Q62442 Pcdh20-201ENSMUST00000061628 5241 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Vamp1Q62442 Cab39-202ENSMUST00000113360 3805 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Vamp1Q62442 Gm45212-201ENSMUST00000205831 3403 ntBASIC14.18□□□□□ -0.14
Vamp1Q62442 Pou2f2-202ENSMUST00000108413 1599 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Vamp1Q62442 Trmt2a-202ENSMUST00000100099 2235 ntAPPRIS P5 TSL 1 (best) BASIC14.18□□□□□ -0.14
Vamp1Q62442 Cxcl14-201ENSMUST00000021970 1827 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Vamp1Q62442 Fgf2os-201ENSMUST00000153785 1441 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Vamp1Q62442 Med26-201ENSMUST00000058534 2997 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Vamp1Q62442 Rusc1-203ENSMUST00000166687 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Vamp1Q62442 Asap2-201ENSMUST00000050990 3345 ntAPPRIS ALT2 TSL 5 BASIC14.18□□□□□ -0.14
Vamp1Q62442 Nfu1-202ENSMUST00000117583 950 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Vamp1Q62442 Gm37444-201ENSMUST00000193605 439 ntBASIC14.18□□□□□ -0.14
Vamp1Q62442 Bag1-204ENSMUST00000215842 1068 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
Retrieved 100 of 76,532 protein–RNA pairs in 29.1 ms