Protein–RNA interactions for Protein: Q62205

Scn9a, Sodium channel protein type 9 subunit alpha, mousemouse

Predictions only

Length 1,984 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn9aQ62205 Nrbp1-201ENSMUST00000031034 2203 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Scn9aQ62205 Por-201ENSMUST00000005651 2636 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Scn9aQ62205 Sdf4-203ENSMUST00000105578 1654 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Scn9aQ62205 Gm10044-203ENSMUST00000166813 1471 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Scn9aQ62205 Cyp21a1-201ENSMUST00000025223 2058 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Scn9aQ62205 Psen2-205ENSMUST00000111108 1997 ntAPPRIS P2 TSL 1 (best) BASIC19.41■□□□□ 0.7
Scn9aQ62205 Gm14701-201ENSMUST00000117156 348 ntBASIC19.41■□□□□ 0.7
Scn9aQ62205 Gm14057-201ENSMUST00000120631 482 ntBASIC19.41■□□□□ 0.7
Scn9aQ62205 AC107711.5-202ENSMUST00000226429 702 ntBASIC19.41■□□□□ 0.7
Scn9aQ62205 Timm10b-201ENSMUST00000058333 694 ntAPPRIS P2 TSL 1 (best) BASIC19.41■□□□□ 0.7
Scn9aQ62205 Relb-201ENSMUST00000049912 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
Scn9aQ62205 Coq6-201ENSMUST00000021661 1602 ntAPPRIS P2 TSL 1 (best) BASIC19.41■□□□□ 0.7
Scn9aQ62205 Ext2-212ENSMUST00000184931 2629 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Scn9aQ62205 Sec14l1-203ENSMUST00000103026 2589 ntAPPRIS ALT2 TSL 5 BASIC19.41■□□□□ 0.7
Scn9aQ62205 Fam3a-203ENSMUST00000114139 931 ntTSL 5 BASIC19.41■□□□□ 0.7
Scn9aQ62205 Rab10os-206ENSMUST00000179908 746 ntTSL 5 BASIC19.41■□□□□ 0.7
Scn9aQ62205 Gm8655-201ENSMUST00000221159 852 ntBASIC19.41■□□□□ 0.7
Scn9aQ62205 Ccdc106-204ENSMUST00000207974 2492 ntTSL 2 BASIC19.41■□□□□ 0.7
Scn9aQ62205 Cep83-201ENSMUST00000020212 3639 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Scn9aQ62205 Taf4-201ENSMUST00000041618 4416 ntAPPRIS P2 TSL 1 (best) BASIC19.4■□□□□ 0.7
Scn9aQ62205 Eepd1-201ENSMUST00000040677 2723 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Scn9aQ62205 Osbpl1a-205ENSMUST00000119512 1947 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Scn9aQ62205 Cobll1-204ENSMUST00000112430 4917 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
Scn9aQ62205 Msl1-204ENSMUST00000107487 2836 ntAPPRIS ALT2 TSL 2 BASIC19.4■□□□□ 0.7
Scn9aQ62205 Gps1-207ENSMUST00000172809 2000 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Scn9aQ62205 1700029J07Rik-202ENSMUST00000098786 1340 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Scn9aQ62205 Polr2i-202ENSMUST00000108192 508 ntTSL 2 BASIC19.4■□□□□ 0.7
Scn9aQ62205 1700028B04Rik-202ENSMUST00000190841 971 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Scn9aQ62205 Gm38708-201ENSMUST00000203855 677 ntTSL 5 BASIC19.4■□□□□ 0.7
Scn9aQ62205 Timm9-205ENSMUST00000221178 529 ntTSL 3 BASIC19.4■□□□□ 0.7
Scn9aQ62205 Gdpd3-201ENSMUST00000032944 1148 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Scn9aQ62205 Rbbp7-203ENSMUST00000112327 1862 ntTSL 5 BASIC19.4■□□□□ 0.7
Scn9aQ62205 Gm26752-201ENSMUST00000181086 1537 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Scn9aQ62205 Ino80e-203ENSMUST00000106343 1973 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Scn9aQ62205 Kat14-208ENSMUST00000147747 3299 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Scn9aQ62205 Ager-209ENSMUST00000174496 1347 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.7
Scn9aQ62205 Meig1-204ENSMUST00000115083 567 ntAPPRIS P1 TSL 2 BASIC19.39■□□□□ 0.7
Scn9aQ62205 Adprm-201ENSMUST00000116363 1283 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
Scn9aQ62205 Nup188-205ENSMUST00000138666 534 ntTSL 1 (best) BASIC19.39■□□□□ 0.7
Scn9aQ62205 Tspan18-201ENSMUST00000028646 1203 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
Scn9aQ62205 Ggnbp1-201ENSMUST00000053683 1525 ntAPPRIS P3 TSL 1 (best) BASIC19.39■□□□□ 0.7
Scn9aQ62205 Ankrd22-201ENSMUST00000025686 1766 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
Scn9aQ62205 Snx2-201ENSMUST00000037850 2013 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
Scn9aQ62205 Mycn-202ENSMUST00000130990 2522 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Scn9aQ62205 Wwc1-201ENSMUST00000018993 4531 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Scn9aQ62205 Gm13283-201ENSMUST00000191112 1463 ntAPPRIS P1 BASIC19.39■□□□□ 0.69
Scn9aQ62205 Ppp4r2-201ENSMUST00000063854 4874 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Scn9aQ62205 Gm13127-201ENSMUST00000118978 1389 ntBASIC19.39■□□□□ 0.69
Scn9aQ62205 Mif4gd-201ENSMUST00000021087 1372 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Scn9aQ62205 Gm10300-201ENSMUST00000094662 2296 ntAPPRIS P1 BASIC19.39■□□□□ 0.69
Scn9aQ62205 Sirt1-207ENSMUST00000177694 3353 ntTSL 5 BASIC19.39■□□□□ 0.69
Scn9aQ62205 Zfyve19-201ENSMUST00000090174 2008 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Scn9aQ62205 Layn-204ENSMUST00000217212 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
Scn9aQ62205 Ppp3ca-202ENSMUST00000070198 4758 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Scn9aQ62205 Gm27321-201ENSMUST00000185021 205 ntBASIC19.39■□□□□ 0.69
Scn9aQ62205 Meaf6-201ENSMUST00000055213 872 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Scn9aQ62205 Fuz-201ENSMUST00000071207 1698 ntAPPRIS P2 TSL 1 (best) BASIC19.39■□□□□ 0.69
Scn9aQ62205 Perp-201ENSMUST00000019998 1952 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Scn9aQ62205 Gm11873-201ENSMUST00000117877 1304 ntBASIC19.38■□□□□ 0.69
Scn9aQ62205 Nrros-203ENSMUST00000115165 2389 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
Scn9aQ62205 AL669916.2-201ENSMUST00000213219 358 ntTSL 2 BASIC19.38■□□□□ 0.69
Scn9aQ62205 AC124549.3-201ENSMUST00000225541 367 ntBASIC19.38■□□□□ 0.69
Scn9aQ62205 Lrrfip1-212ENSMUST00000189617 2155 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
Scn9aQ62205 Gjb1-201ENSMUST00000052130 1565 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Scn9aQ62205 Gm16976-202ENSMUST00000127408 1515 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
Scn9aQ62205 Tulp1-201ENSMUST00000041819 2017 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Scn9aQ62205 Herpud2-201ENSMUST00000008573 2781 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Scn9aQ62205 Sfn-201ENSMUST00000057311 1613 ntAPPRIS P1 BASIC19.37■□□□□ 0.69
Scn9aQ62205 1700012D14Rik-201ENSMUST00000209597 605 ntTSL 3 BASIC19.37■□□□□ 0.69
Scn9aQ62205 Nckap1-202ENSMUST00000111760 4597 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Scn9aQ62205 Kat2b-201ENSMUST00000000724 4653 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Scn9aQ62205 Ddx41-204ENSMUST00000224765 2199 ntBASIC19.37■□□□□ 0.69
Scn9aQ62205 Rara-204ENSMUST00000107475 2469 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Scn9aQ62205 Mettl27-202ENSMUST00000068617 1685 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Scn9aQ62205 Mex3d-201ENSMUST00000105350 3266 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Scn9aQ62205 Dusp14-205ENSMUST00000164891 1454 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Scn9aQ62205 Rab9-202ENSMUST00000112091 1447 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Scn9aQ62205 Gm11467-201ENSMUST00000129407 674 ntTSL 3 BASIC19.37■□□□□ 0.69
Scn9aQ62205 Gm16156-201ENSMUST00000141168 713 ntTSL 3 BASIC19.37■□□□□ 0.69
Scn9aQ62205 Pmf1-205ENSMUST00000193338 795 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Scn9aQ62205 Dad1-201ENSMUST00000022781 878 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Scn9aQ62205 Lin37-201ENSMUST00000043975 998 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Scn9aQ62205 Crb3-201ENSMUST00000071826 1194 ntAPPRIS P3 TSL 3 BASIC19.37■□□□□ 0.69
Scn9aQ62205 Atp5b-201ENSMUST00000026459 1916 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Scn9aQ62205 Tom1l2-201ENSMUST00000064019 2151 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Scn9aQ62205 Smu1-201ENSMUST00000030117 2418 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Scn9aQ62205 Atat1-202ENSMUST00000061052 1452 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
Scn9aQ62205 Sytl3-201ENSMUST00000097430 2100 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Scn9aQ62205 Macrod2-206ENSMUST00000110064 4883 ntAPPRIS P2 TSL 1 (best) BASIC19.36■□□□□ 0.69
Scn9aQ62205 Apbb1-209ENSMUST00000188368 1970 ntTSL 5 BASIC19.36■□□□□ 0.69
Scn9aQ62205 Casp3-204ENSMUST00000211115 2601 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Scn9aQ62205 Spsb4-201ENSMUST00000055433 2720 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Scn9aQ62205 Ewsr1-203ENSMUST00000079949 2588 ntAPPRIS P3 TSL 1 (best) BASIC19.36■□□□□ 0.69
Scn9aQ62205 Psmb5-ps-201ENSMUST00000119744 798 ntBASIC19.36■□□□□ 0.69
Scn9aQ62205 Psma6-204ENSMUST00000163070 787 ntTSL 5 BASIC19.36■□□□□ 0.69
Scn9aQ62205 Znrf1-213ENSMUST00000174333 515 ntTSL 3 BASIC19.36■□□□□ 0.69
Scn9aQ62205 Nckipsd-206ENSMUST00000195323 467 ntTSL 3 BASIC19.36■□□□□ 0.69
Scn9aQ62205 Gm5186-201ENSMUST00000218781 920 ntBASIC19.36■□□□□ 0.69
Scn9aQ62205 Cox7a2l-201ENSMUST00000025095 1078 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Scn9aQ62205 Ly6k-201ENSMUST00000060301 791 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Retrieved 100 of 76,532 protein–RNA pairs in 20.6 ms