Protein–RNA interactions for Protein: Q5SX79

Shroom1, Protein Shroom1, mousemouse

Predictions only

Length 823 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shroom1Q5SX79 Lrch3-203ENSMUST00000135193 2794 ntAPPRIS ALT2 TSL 5 BASIC17.58■□□□□ 0.4
Shroom1Q5SX79 Pard3-209ENSMUST00000160272 5815 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.4
Shroom1Q5SX79 Fam131b-201ENSMUST00000031891 4065 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
Shroom1Q5SX79 Rad23a-202ENSMUST00000109761 1842 ntAPPRIS ALT1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Shroom1Q5SX79 Sept10-203ENSMUST00000220156 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.4
Shroom1Q5SX79 Cnot9-201ENSMUST00000087215 3268 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Shroom1Q5SX79 Ascl2-201ENSMUST00000009392 1605 ntAPPRIS P2 TSL 1 (best) BASIC17.58■□□□□ 0.4
Shroom1Q5SX79 Nsun5-201ENSMUST00000000940 2243 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Shroom1Q5SX79 Zic1-202ENSMUST00000065360 2811 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Shroom1Q5SX79 Zkscan4-202ENSMUST00000225845 1506 ntBASIC17.57■□□□□ 0.4
Shroom1Q5SX79 Gnb2-203ENSMUST00000111023 1471 ntTSL 5 BASIC17.57■□□□□ 0.4
Shroom1Q5SX79 4833418N02Rik-202ENSMUST00000146560 1495 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Shroom1Q5SX79 Gm9917-202ENSMUST00000181099 1499 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Shroom1Q5SX79 Ppp2r2d-207ENSMUST00000155672 1938 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Shroom1Q5SX79 Arntl-204ENSMUST00000210238 2976 ntAPPRIS P1 TSL 5 BASIC17.57■□□□□ 0.4
Shroom1Q5SX79 Acads-201ENSMUST00000031524 1870 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Shroom1Q5SX79 Flg-202ENSMUST00000178008 768 ntAPPRIS ALT2 BASIC17.57■□□□□ 0.4
Shroom1Q5SX79 Flg-205ENSMUST00000179250 765 ntAPPRIS ALT2 BASIC17.57■□□□□ 0.4
Shroom1Q5SX79 Flg-206ENSMUST00000179477 768 ntAPPRIS ALT2 BASIC17.57■□□□□ 0.4
Shroom1Q5SX79 Gm38119-201ENSMUST00000192027 755 ntAPPRIS P1 TSL 5 BASIC17.57■□□□□ 0.4
Shroom1Q5SX79 Gm29707-201ENSMUST00000196325 491 ntBASIC17.57■□□□□ 0.4
Shroom1Q5SX79 Gm44450-201ENSMUST00000199528 114 ntBASIC17.57■□□□□ 0.4
Shroom1Q5SX79 CAAA01066804.1-201ENSMUST00000217800 611 ntTSL 3 BASIC17.57■□□□□ 0.4
Shroom1Q5SX79 Timm8a2-201ENSMUST00000045976 913 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Shroom1Q5SX79 Gm9857-201ENSMUST00000050914 393 ntAPPRIS P1 BASIC17.57■□□□□ 0.4
Shroom1Q5SX79 Cldn19-201ENSMUST00000084309 924 ntAPPRIS P4 TSL 1 (best) BASIC17.57■□□□□ 0.4
Shroom1Q5SX79 Serf2-201ENSMUST00000099475 525 ntTSL 2 BASIC17.57■□□□□ 0.4
Shroom1Q5SX79 Crhbp-201ENSMUST00000045583 1701 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Shroom1Q5SX79 9330151L19Rik-201ENSMUST00000181850 2545 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Shroom1Q5SX79 Trim14-202ENSMUST00000102924 1582 ntTSL 2 BASIC17.57■□□□□ 0.4
Shroom1Q5SX79 Rhof-201ENSMUST00000031401 2208 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Shroom1Q5SX79 Acsl3-205ENSMUST00000142704 2976 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Shroom1Q5SX79 Farsa-202ENSMUST00000109754 1795 ntAPPRIS ALT1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Shroom1Q5SX79 Lrrtm1-202ENSMUST00000159616 2541 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Shroom1Q5SX79 Gpr20-201ENSMUST00000064166 2144 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Shroom1Q5SX79 Sart3-201ENSMUST00000019118 4447 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Shroom1Q5SX79 Hdhd2-202ENSMUST00000097521 1716 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Shroom1Q5SX79 5830415G21Rik-201ENSMUST00000192543 1332 ntBASIC17.56■□□□□ 0.4
Shroom1Q5SX79 Fgf17-201ENSMUST00000022697 1689 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Shroom1Q5SX79 Ppan-201ENSMUST00000004203 1670 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Shroom1Q5SX79 Stambpl1-201ENSMUST00000054956 2024 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Shroom1Q5SX79 Pafah1b3-207ENSMUST00000155118 679 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Shroom1Q5SX79 Tulp3-205ENSMUST00000157005 1053 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Shroom1Q5SX79 Mpst-202ENSMUST00000167140 1279 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
Shroom1Q5SX79 Rpp40-202ENSMUST00000174230 1053 ntTSL 5 BASIC17.56■□□□□ 0.4
Shroom1Q5SX79 2010010A06Rik-202ENSMUST00000186356 694 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Shroom1Q5SX79 Gm43077-201ENSMUST00000200602 491 ntTSL 3 BASIC17.56■□□□□ 0.4
Shroom1Q5SX79 Gm40457-201ENSMUST00000205319 1174 ntTSL 5 BASIC17.56■□□□□ 0.4
Shroom1Q5SX79 Gm44930-202ENSMUST00000208733 689 ntTSL 5 BASIC17.56■□□□□ 0.4
Shroom1Q5SX79 AC153889.1-201ENSMUST00000219257 330 ntBASIC17.56■□□□□ 0.4
Shroom1Q5SX79 AC124569.2-201ENSMUST00000225998 818 ntBASIC17.56■□□□□ 0.4
Shroom1Q5SX79 Prm2-201ENSMUST00000037996 621 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Shroom1Q5SX79 Hist1h1a-201ENSMUST00000055770 741 ntAPPRIS P1 BASIC17.56■□□□□ 0.4
Shroom1Q5SX79 Sh2b1-203ENSMUST00000205440 3089 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Shroom1Q5SX79 Eefsec-201ENSMUST00000165242 2679 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Shroom1Q5SX79 Tnfsf14-201ENSMUST00000005976 1859 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Shroom1Q5SX79 Mirt1-201ENSMUST00000180489 5292 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Shroom1Q5SX79 Snx25-203ENSMUST00000110378 3445 ntAPPRIS ALT2 TSL 5 BASIC17.56■□□□□ 0.4
Shroom1Q5SX79 Dhx36-201ENSMUST00000029336 5620 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Shroom1Q5SX79 Trim37-201ENSMUST00000041282 5632 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Shroom1Q5SX79 Gm3468-201ENSMUST00000165193 1955 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
Shroom1Q5SX79 Gm2956-201ENSMUST00000177786 1955 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
Shroom1Q5SX79 Tm9sf1-205ENSMUST00000122358 2517 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Shroom1Q5SX79 Mbp-201ENSMUST00000047865 2492 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Shroom1Q5SX79 Vrk2-201ENSMUST00000078362 1889 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Shroom1Q5SX79 Ctsg-201ENSMUST00000015583 1002 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Shroom1Q5SX79 Bex3-204ENSMUST00000178632 933 ntAPPRIS P3 TSL 2 BASIC17.55■□□□□ 0.4
Shroom1Q5SX79 Srrd-201ENSMUST00000031289 1110 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Shroom1Q5SX79 Ifi27l2a-201ENSMUST00000055071 463 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Shroom1Q5SX79 Ttc14-203ENSMUST00000117915 4913 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Shroom1Q5SX79 Tubg1-201ENSMUST00000043680 1802 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Shroom1Q5SX79 Marveld1-201ENSMUST00000061111 3066 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Shroom1Q5SX79 Lrch3-211ENSMUST00000170899 2752 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Shroom1Q5SX79 Sh3glb1-205ENSMUST00000199854 1416 ntTSL 5 BASIC17.55■□□□□ 0.4
Shroom1Q5SX79 Gbx1-201ENSMUST00000088311 3475 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Shroom1Q5SX79 Csnk2a2-203ENSMUST00000212214 6779 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Shroom1Q5SX79 Ankib1-201ENSMUST00000043551 6426 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Shroom1Q5SX79 Mtif3-201ENSMUST00000016654 2131 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Shroom1Q5SX79 Smurf2-201ENSMUST00000092517 3125 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Shroom1Q5SX79 Phtf1-201ENSMUST00000055425 3060 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Shroom1Q5SX79 Tle3-211ENSMUST00000161689 2836 ntTSL 2 BASIC17.54■□□□□ 0.4
Shroom1Q5SX79 Haglr-201ENSMUST00000100000 2085 ntBASIC17.54■□□□□ 0.4
Shroom1Q5SX79 Rara-202ENSMUST00000107473 3238 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Shroom1Q5SX79 Ostf1-201ENSMUST00000025631 2726 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Shroom1Q5SX79 Ets1-201ENSMUST00000034534 5080 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Shroom1Q5SX79 Ptpre-207ENSMUST00000211140 5753 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
Shroom1Q5SX79 Ppp1r3f-205ENSMUST00000150787 4760 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Shroom1Q5SX79 Nat9-203ENSMUST00000103040 1204 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Shroom1Q5SX79 Nat9-204ENSMUST00000103041 953 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
Shroom1Q5SX79 Lcn12-202ENSMUST00000114245 619 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Shroom1Q5SX79 Gm12895-201ENSMUST00000122214 226 ntBASIC17.54■□□□□ 0.4
Shroom1Q5SX79 Apopt1-204ENSMUST00000163220 671 ntAPPRIS ALT2 TSL 2 BASIC17.54■□□□□ 0.4
Shroom1Q5SX79 Erdr1-203ENSMUST00000179077 887 ntAPPRIS ALT2 TSL 5 BASIC17.54■□□□□ 0.4
Shroom1Q5SX79 Gm38186-201ENSMUST00000192574 449 ntTSL 3 BASIC17.54■□□□□ 0.4
Shroom1Q5SX79 Rbl2-201ENSMUST00000034091 4925 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
Shroom1Q5SX79 Mipep-201ENSMUST00000063562 3015 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Shroom1Q5SX79 Il17re-208ENSMUST00000204774 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Shroom1Q5SX79 Polr3e-203ENSMUST00000207481 2545 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Shroom1Q5SX79 Cog6-204ENSMUST00000193432 2078 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Shroom1Q5SX79 Shroom3-211ENSMUST00000225438 5742 ntBASIC17.54■□□□□ 0.4
Retrieved 100 of 76,532 protein–RNA pairs in 42.8 ms