Protein–RNA interactions for Protein: Q3UQS2

Lsmem1, Leucine-rich single-pass membrane protein 1, mousemouse

Predictions only

Length 128 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lsmem1Q3UQS2 Bcor-206ENSMUST00000124033 6785 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
Lsmem1Q3UQS2 Trim54-202ENSMUST00000202769 1408 ntAPPRIS ALT1 TSL 5 BASIC16.78■□□□□ 0.28
Lsmem1Q3UQS2 Rap2a-201ENSMUST00000062117 4191 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Lsmem1Q3UQS2 Rgs3-203ENSMUST00000098031 2072 ntAPPRIS ALT1 TSL 5 BASIC16.77■□□□□ 0.28
Lsmem1Q3UQS2 Dbnl-202ENSMUST00000102928 2295 ntAPPRIS P3 TSL 1 (best) BASIC16.77■□□□□ 0.28
Lsmem1Q3UQS2 Atp5a1-201ENSMUST00000026495 2471 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Lsmem1Q3UQS2 Sctr-201ENSMUST00000072886 2012 ntAPPRIS P3 TSL 2 BASIC16.77■□□□□ 0.28
Lsmem1Q3UQS2 Auh-201ENSMUST00000021913 1320 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Lsmem1Q3UQS2 Lrch4-201ENSMUST00000031734 3078 ntAPPRIS P3 TSL 1 (best) BASIC16.77■□□□□ 0.28
Lsmem1Q3UQS2 Dtx3-202ENSMUST00000116229 1994 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
Lsmem1Q3UQS2 4933427J07Rik-201ENSMUST00000156275 1533 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
Lsmem1Q3UQS2 Mon2-202ENSMUST00000073792 9301 ntAPPRIS ALT2 TSL 5 BASIC16.77■□□□□ 0.28
Lsmem1Q3UQS2 Glcci1-201ENSMUST00000064285 6200 ntAPPRIS P3 TSL 1 (best) BASIC16.77■□□□□ 0.28
Lsmem1Q3UQS2 Mzt2-202ENSMUST00000117136 758 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Lsmem1Q3UQS2 Gm11950-201ENSMUST00000121615 838 ntBASIC16.77■□□□□ 0.28
Lsmem1Q3UQS2 Atp6v1g2-203ENSMUST00000130992 524 ntTSL 2 BASIC16.77■□□□□ 0.28
Lsmem1Q3UQS2 U2af1-201ENSMUST00000014684 907 ntAPPRIS P3 TSL 1 (best) BASIC16.77■□□□□ 0.28
Lsmem1Q3UQS2 U2af1-202ENSMUST00000166526 907 ntAPPRIS ALT2 TSL 2 BASIC16.77■□□□□ 0.28
Lsmem1Q3UQS2 5430416N02Rik-202ENSMUST00000181873 626 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
Lsmem1Q3UQS2 Aga-203ENSMUST00000211424 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.28
Lsmem1Q3UQS2 Stradb-201ENSMUST00000027185 2960 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Lsmem1Q3UQS2 2310039H08Rik-201ENSMUST00000071430 773 ntAPPRIS P1 BASIC16.77■□□□□ 0.28
Lsmem1Q3UQS2 Fthl17f-201ENSMUST00000097029 847 ntAPPRIS P1 BASIC16.77■□□□□ 0.28
Lsmem1Q3UQS2 Ccdc30-201ENSMUST00000044781 1464 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
Lsmem1Q3UQS2 Fhl3-201ENSMUST00000038684 1664 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
Lsmem1Q3UQS2 Zdhhc1-203ENSMUST00000212303 2056 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Lsmem1Q3UQS2 Mis18bp1-208ENSMUST00000222244 2053 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
Lsmem1Q3UQS2 Fbxl3-201ENSMUST00000022720 4309 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Lsmem1Q3UQS2 Slc35e3-201ENSMUST00000079041 3489 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Lsmem1Q3UQS2 H2-DMb1-201ENSMUST00000114232 1404 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Lsmem1Q3UQS2 Rgp1-203ENSMUST00000117140 1635 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
Lsmem1Q3UQS2 Rad23a-202ENSMUST00000109761 1842 ntAPPRIS ALT1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Lsmem1Q3UQS2 Ulk1-201ENSMUST00000031490 5213 ntAPPRIS P3 TSL 1 (best) BASIC16.77■□□□□ 0.27
Lsmem1Q3UQS2 Ivns1abp-203ENSMUST00000111887 2783 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
Lsmem1Q3UQS2 Lrch3-203ENSMUST00000135193 2794 ntAPPRIS ALT2 TSL 5 BASIC16.77■□□□□ 0.27
Lsmem1Q3UQS2 Lhfp-203ENSMUST00000147139 1932 ntAPPRIS P1 TSL 5 BASIC16.76■□□□□ 0.27
Lsmem1Q3UQS2 Prrt4-201ENSMUST00000159200 3411 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Lsmem1Q3UQS2 Gnaz-201ENSMUST00000037813 3519 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Lsmem1Q3UQS2 Otud5-202ENSMUST00000115665 3821 ntTSL 5 BASIC16.76■□□□□ 0.27
Lsmem1Q3UQS2 Uba52-203ENSMUST00000125184 711 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Lsmem1Q3UQS2 Gm15545-202ENSMUST00000141011 899 ntTSL 3 BASIC16.76■□□□□ 0.27
Lsmem1Q3UQS2 Rfesd-202ENSMUST00000167271 595 ntAPPRIS P1 TSL 2 BASIC16.76■□□□□ 0.27
Lsmem1Q3UQS2 Flg-207ENSMUST00000180293 768 ntAPPRIS ALT2 BASIC16.76■□□□□ 0.27
Lsmem1Q3UQS2 Shc3-203ENSMUST00000223543 1241 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Lsmem1Q3UQS2 Odf3b-201ENSMUST00000049968 1040 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Lsmem1Q3UQS2 BC049762-201ENSMUST00000054226 760 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Lsmem1Q3UQS2 Birc5-201ENSMUST00000081387 947 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Lsmem1Q3UQS2 Jam2-201ENSMUST00000098407 1998 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Lsmem1Q3UQS2 Calb2-201ENSMUST00000003754 1431 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Lsmem1Q3UQS2 Bean1-204ENSMUST00000171018 3386 ntAPPRIS P4 TSL 1 (best) BASIC16.76■□□□□ 0.27
Lsmem1Q3UQS2 Zbtb24-201ENSMUST00000080771 2844 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Lsmem1Q3UQS2 Impdh1-202ENSMUST00000159124 2600 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Lsmem1Q3UQS2 Mybl2-201ENSMUST00000018005 3651 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Lsmem1Q3UQS2 Hexb-201ENSMUST00000022169 1905 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Lsmem1Q3UQS2 Ankrd9-202ENSMUST00000128353 2577 ntAPPRIS P2 TSL 1 (best) BASIC16.76■□□□□ 0.27
Lsmem1Q3UQS2 Gpc3-201ENSMUST00000069360 2216 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Lsmem1Q3UQS2 Susd1-202ENSMUST00000107544 3220 ntAPPRIS ALT2 TSL 5 BASIC16.75■□□□□ 0.27
Lsmem1Q3UQS2 Dok3-201ENSMUST00000047877 1546 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Lsmem1Q3UQS2 Lrrtm1-202ENSMUST00000159616 2541 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Lsmem1Q3UQS2 Adnp2-201ENSMUST00000066743 5012 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Lsmem1Q3UQS2 Lsm1-201ENSMUST00000038421 2663 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Lsmem1Q3UQS2 Ptprf-201ENSMUST00000049074 7656 ntAPPRIS P1 TSL 5 BASIC16.75■□□□□ 0.27
Lsmem1Q3UQS2 Prkar2a-201ENSMUST00000035220 4965 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Lsmem1Q3UQS2 Zic3-202ENSMUST00000088629 1951 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Lsmem1Q3UQS2 Gm14317-201ENSMUST00000151754 1464 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Lsmem1Q3UQS2 Asic2-201ENSMUST00000021045 3436 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Lsmem1Q3UQS2 1700025L06Rik-203ENSMUST00000211477 1623 ntTSL 5 BASIC16.75■□□□□ 0.27
Lsmem1Q3UQS2 Plekha4-202ENSMUST00000209517 2577 ntAPPRIS P2 TSL 5 BASIC16.75■□□□□ 0.27
Lsmem1Q3UQS2 D3Ertd751e-205ENSMUST00000120167 773 ntAPPRIS ALT2 TSL 5 BASIC16.75■□□□□ 0.27
Lsmem1Q3UQS2 Gm36967-201ENSMUST00000193814 266 ntBASIC16.75■□□□□ 0.27
Lsmem1Q3UQS2 Eif3h-201ENSMUST00000022925 1295 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Lsmem1Q3UQS2 Polr2f-201ENSMUST00000040077 543 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Lsmem1Q3UQS2 Rpl27-201ENSMUST00000077856 614 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Lsmem1Q3UQS2 C1qbp-201ENSMUST00000078528 1175 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Lsmem1Q3UQS2 Zfp524-201ENSMUST00000086349 1142 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Lsmem1Q3UQS2 4933428G20Rik-201ENSMUST00000056955 1425 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Lsmem1Q3UQS2 H2-K1-205ENSMUST00000172912 1570 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
Lsmem1Q3UQS2 Fam171b-201ENSMUST00000051454 5614 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Lsmem1Q3UQS2 Pcmt1-202ENSMUST00000159917 2491 ntAPPRIS P3 TSL 1 (best) BASIC16.75■□□□□ 0.27
Lsmem1Q3UQS2 Tbc1d9b-202ENSMUST00000101270 5213 ntAPPRIS ALT2 TSL 5 BASIC16.75■□□□□ 0.27
Lsmem1Q3UQS2 Zfp746-201ENSMUST00000073124 3651 ntAPPRIS P3 TSL 1 (best) BASIC16.75■□□□□ 0.27
Lsmem1Q3UQS2 Gja4-201ENSMUST00000053753 1685 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Lsmem1Q3UQS2 Cend1-201ENSMUST00000084436 1672 ntAPPRIS P1 TSL 5 BASIC16.75■□□□□ 0.27
Lsmem1Q3UQS2 Dyx1c1-201ENSMUST00000034734 1975 ntAPPRIS P3 TSL 1 (best) BASIC16.75■□□□□ 0.27
Lsmem1Q3UQS2 Snx16-201ENSMUST00000029047 2288 ntAPPRIS P3 TSL 1 (best) BASIC16.75■□□□□ 0.27
Lsmem1Q3UQS2 Gnao1-207ENSMUST00000138659 5526 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Lsmem1Q3UQS2 Dhx30-224ENSMUST00000200066 4623 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Lsmem1Q3UQS2 Klhl40-201ENSMUST00000098272 2370 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Lsmem1Q3UQS2 Il11ra1-204ENSMUST00000108042 1768 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Lsmem1Q3UQS2 Clasrp-201ENSMUST00000086041 2180 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Lsmem1Q3UQS2 Gm8189-202ENSMUST00000211035 2039 ntTSL 5 BASIC16.74■□□□□ 0.27
Lsmem1Q3UQS2 Msi2-201ENSMUST00000092794 1855 ntAPPRIS P2 TSL 1 (best) BASIC16.74■□□□□ 0.27
Lsmem1Q3UQS2 Rasgef1b-205ENSMUST00000161148 2430 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Lsmem1Q3UQS2 Lmo4-203ENSMUST00000121796 1417 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Lsmem1Q3UQS2 Fgf8-205ENSMUST00000111927 843 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
Lsmem1Q3UQS2 Gm14641-201ENSMUST00000136486 452 ntTSL 3 BASIC16.74■□□□□ 0.27
Lsmem1Q3UQS2 Rerg-204ENSMUST00000149100 635 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Lsmem1Q3UQS2 Gm38186-201ENSMUST00000192574 449 ntTSL 3 BASIC16.74■□□□□ 0.27
Lsmem1Q3UQS2 Prm2-201ENSMUST00000037996 621 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Lsmem1Q3UQS2 Shroom3-211ENSMUST00000225438 5742 ntBASIC16.74■□□□□ 0.27
Retrieved 100 of 76,532 protein–RNA pairs in 24.8 ms