Protein–RNA interactions for Protein: Q3KNJ2

Nhej1, Non-homologous end-joining factor 1, mousemouse

Predictions only

Length 295 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nhej1Q3KNJ2 Gm26568-201ENSMUST00000180496 1594 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Nhej1Q3KNJ2 Plac9a-201ENSMUST00000052286 1555 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Nhej1Q3KNJ2 Rilpl1-201ENSMUST00000062153 2249 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Nhej1Q3KNJ2 Dtx2-202ENSMUST00000111142 2650 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Nhej1Q3KNJ2 Dcaf17-203ENSMUST00000112159 2490 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Nhej1Q3KNJ2 Rfx7-202ENSMUST00000163401 7880 ntAPPRIS P1 TSL 2 BASIC17.65■□□□□ 0.42
Nhej1Q3KNJ2 Pdgfa-202ENSMUST00000076095 2060 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Nhej1Q3KNJ2 Gpd1l-201ENSMUST00000084853 1436 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Nhej1Q3KNJ2 Atoh1-201ENSMUST00000101351 2121 ntAPPRIS P1 BASIC17.65■□□□□ 0.42
Nhej1Q3KNJ2 AC175538.1-201ENSMUST00000225343 1269 ntBASIC17.65■□□□□ 0.42
Nhej1Q3KNJ2 Slc35b2-207ENSMUST00000226086 850 ntBASIC17.65■□□□□ 0.42
Nhej1Q3KNJ2 Dok5-201ENSMUST00000029075 1768 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Nhej1Q3KNJ2 Mid2-202ENSMUST00000112990 6271 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
Nhej1Q3KNJ2 Tmtc4-204ENSMUST00000126867 2952 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
Nhej1Q3KNJ2 Zpr1-206ENSMUST00000156440 2984 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Nhej1Q3KNJ2 Cnbd2-201ENSMUST00000037096 2277 ntAPPRIS P2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Nhej1Q3KNJ2 Rnf168-203ENSMUST00000171474 4460 ntAPPRIS P2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Nhej1Q3KNJ2 Cdk9-202ENSMUST00000120105 1565 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Nhej1Q3KNJ2 Hand1-203ENSMUST00000160392 1806 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Nhej1Q3KNJ2 Cdc23-201ENSMUST00000025228 2084 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Nhej1Q3KNJ2 Pitx3-201ENSMUST00000026259 1380 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Nhej1Q3KNJ2 Pdcl3-201ENSMUST00000027247 3914 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Nhej1Q3KNJ2 AC154231.1-201ENSMUST00000220564 2175 ntBASIC17.64■□□□□ 0.42
Nhej1Q3KNJ2 Chst10-206ENSMUST00000194361 2996 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.42
Nhej1Q3KNJ2 Nipa2-201ENSMUST00000032635 3197 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Nhej1Q3KNJ2 Trmt2a-203ENSMUST00000115640 2367 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
Nhej1Q3KNJ2 Tmem47-203ENSMUST00000171953 1801 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Nhej1Q3KNJ2 Bend5-201ENSMUST00000030274 1826 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Nhej1Q3KNJ2 Zmynd19-202ENSMUST00000148042 1103 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Nhej1Q3KNJ2 Ripor2-205ENSMUST00000110384 5608 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
Nhej1Q3KNJ2 Prpf40b-212ENSMUST00000145482 3308 ntAPPRIS P2 TSL 1 (best) BASIC17.64■□□□□ 0.41
Nhej1Q3KNJ2 Raxos1-201ENSMUST00000181100 2547 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Nhej1Q3KNJ2 Lca5l-202ENSMUST00000113804 3162 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
Nhej1Q3KNJ2 Hey2-201ENSMUST00000019924 2550 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Nhej1Q3KNJ2 A130010J15Rik-201ENSMUST00000110831 2257 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Nhej1Q3KNJ2 Stox2-208ENSMUST00000211737 4573 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Nhej1Q3KNJ2 Gramd4-204ENSMUST00000138134 4292 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Nhej1Q3KNJ2 Ric1-201ENSMUST00000043610 7190 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.41
Nhej1Q3KNJ2 H6pd-201ENSMUST00000030830 4745 ntAPPRIS P3 TSL 1 (best) BASIC17.63■□□□□ 0.41
Nhej1Q3KNJ2 Gm14317-201ENSMUST00000151754 1464 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Nhej1Q3KNJ2 Lrrfip2-207ENSMUST00000197256 1819 ntTSL 5 BASIC17.63■□□□□ 0.41
Nhej1Q3KNJ2 Xrcc1-205ENSMUST00000205573 2528 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Nhej1Q3KNJ2 Kcnq2-204ENSMUST00000103047 2899 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Nhej1Q3KNJ2 Rabl6-201ENSMUST00000058137 3230 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Nhej1Q3KNJ2 Arntl-201ENSMUST00000047321 2908 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Nhej1Q3KNJ2 Wipi2-201ENSMUST00000036872 5171 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Nhej1Q3KNJ2 Akp-ps1-202ENSMUST00000212812 1959 ntTSL 5 BASIC17.63■□□□□ 0.41
Nhej1Q3KNJ2 Epo-203ENSMUST00000111039 706 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Nhej1Q3KNJ2 Creb1-207ENSMUST00000187811 1255 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Nhej1Q3KNJ2 Adamts19-201ENSMUST00000052907 4666 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Nhej1Q3KNJ2 Nkx2-1-201ENSMUST00000001536 2809 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Nhej1Q3KNJ2 Gcat-202ENSMUST00000171999 1763 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Nhej1Q3KNJ2 3110002H16Rik-201ENSMUST00000025276 2170 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Nhej1Q3KNJ2 Trim25-202ENSMUST00000100627 1433 ntTSL 5 BASIC17.63■□□□□ 0.41
Nhej1Q3KNJ2 Tuba8-201ENSMUST00000032233 2263 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Nhej1Q3KNJ2 Rint1-205ENSMUST00000120869 1886 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Nhej1Q3KNJ2 Mid1-206ENSMUST00000112107 3194 ntTSL 5 BASIC17.63■□□□□ 0.41
Nhej1Q3KNJ2 Mta1-203ENSMUST00000109723 2790 ntAPPRIS ALT2 TSL 5 BASIC17.62■□□□□ 0.41
Nhej1Q3KNJ2 Mta1-204ENSMUST00000109726 2775 ntAPPRIS P3 TSL 1 (best) BASIC17.62■□□□□ 0.41
Nhej1Q3KNJ2 Mta1-205ENSMUST00000109727 2789 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
Nhej1Q3KNJ2 Ppp2r2a-204ENSMUST00000225380 1988 ntBASIC17.62■□□□□ 0.41
Nhej1Q3KNJ2 Vstm5-201ENSMUST00000034413 1991 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Nhej1Q3KNJ2 Bcam-201ENSMUST00000003061 2429 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Nhej1Q3KNJ2 1810041L15Rik-203ENSMUST00000189248 5296 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Nhej1Q3KNJ2 Nucb2-201ENSMUST00000032895 1685 ntAPPRIS P2 TSL 1 (best) BASIC17.62■□□□□ 0.41
Nhej1Q3KNJ2 Camk2d-226ENSMUST00000199300 5524 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Nhej1Q3KNJ2 Cachd1-202ENSMUST00000097955 4277 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
Nhej1Q3KNJ2 CT010478.1-201ENSMUST00000220747 2787 ntBASIC17.62■□□□□ 0.41
Nhej1Q3KNJ2 Zfp467-208ENSMUST00000114564 626 ntTSL 2 BASIC17.62■□□□□ 0.41
Nhej1Q3KNJ2 Gm13181-201ENSMUST00000120117 1069 ntBASIC17.62■□□□□ 0.41
Nhej1Q3KNJ2 Gm15908-201ENSMUST00000154345 1091 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Nhej1Q3KNJ2 Spata33-206ENSMUST00000212637 569 ntAPPRIS ALT2 TSL 2 BASIC17.62■□□□□ 0.41
Nhej1Q3KNJ2 Gm7791-201ENSMUST00000219066 539 ntBASIC17.62■□□□□ 0.41
Nhej1Q3KNJ2 Krt88-201ENSMUST00000023781 903 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Nhej1Q3KNJ2 Tnnt2-201ENSMUST00000027671 1064 ntAPPRIS ALT2 TSL 5 BASIC17.62■□□□□ 0.41
Nhej1Q3KNJ2 Thrsp-201ENSMUST00000043077 1277 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Nhej1Q3KNJ2 Lsm10-201ENSMUST00000055575 943 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Nhej1Q3KNJ2 Vgll2-201ENSMUST00000058347 966 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
Nhej1Q3KNJ2 BC048679-201ENSMUST00000073406 522 ntAPPRIS P3 TSL 1 (best) BASIC17.62■□□□□ 0.41
Nhej1Q3KNJ2 4933402J07Rik-201ENSMUST00000093342 1304 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Nhej1Q3KNJ2 Degs1-201ENSMUST00000035295 2048 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Nhej1Q3KNJ2 Ptprt-201ENSMUST00000109441 6623 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
Nhej1Q3KNJ2 Klc1-202ENSMUST00000118471 2272 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Nhej1Q3KNJ2 Fam83f-201ENSMUST00000023044 2988 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Nhej1Q3KNJ2 Trim28-201ENSMUST00000005705 3245 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Nhej1Q3KNJ2 Hist1h4c-201ENSMUST00000102967 820 ntAPPRIS P1 BASIC17.61■□□□□ 0.41
Nhej1Q3KNJ2 Ccdc107-202ENSMUST00000107922 865 ntAPPRIS ALT2 TSL 2 BASIC17.61■□□□□ 0.41
Nhej1Q3KNJ2 Steap1-201ENSMUST00000015796 1230 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Nhej1Q3KNJ2 Gm17182-201ENSMUST00000163795 860 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Nhej1Q3KNJ2 Gm16042-201ENSMUST00000204813 1247 ntBASIC17.61■□□□□ 0.41
Nhej1Q3KNJ2 Gm17949-201ENSMUST00000210548 1179 ntAPPRIS P1 TSL 5 BASIC17.61■□□□□ 0.41
Nhej1Q3KNJ2 Aprt-204ENSMUST00000212093 723 ntTSL 2 BASIC17.61■□□□□ 0.41
Nhej1Q3KNJ2 D130020L05Rik-202ENSMUST00000220889 769 ntTSL 3 BASIC17.61■□□□□ 0.41
Nhej1Q3KNJ2 Ccdc107-201ENSMUST00000030181 817 ntAPPRIS P2 TSL 1 (best) BASIC17.61■□□□□ 0.41
Nhej1Q3KNJ2 Tm2d1-201ENSMUST00000030292 952 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Nhej1Q3KNJ2 Mapk7-201ENSMUST00000079080 3019 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Nhej1Q3KNJ2 Cfap206-201ENSMUST00000029971 2246 ntAPPRIS P1 TSL 5 BASIC17.61■□□□□ 0.41
Nhej1Q3KNJ2 Espn-204ENSMUST00000080042 1402 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Nhej1Q3KNJ2 Dhfr-201ENSMUST00000022218 5347 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Nhej1Q3KNJ2 Psmd8-201ENSMUST00000059642 1540 ntAPPRIS P2 TSL 1 (best) BASIC17.61■□□□□ 0.41
Retrieved 100 of 76,532 protein–RNA pairs in 31 ms