Protein–RNA interactions for Protein: Q0EEE2

Ptchd3, Patched domain-containing protein 3, mousemouse

Predictions only

Length 906 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ptchd3Q0EEE2 Cacnb1-204ENSMUST00000107561 1778 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
Ptchd3Q0EEE2 Gm26891-201ENSMUST00000181644 2599 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
Ptchd3Q0EEE2 Tef-201ENSMUST00000023024 4079 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
Ptchd3Q0EEE2 Gtf3c4-204ENSMUST00000171404 7127 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
Ptchd3Q0EEE2 Med26-201ENSMUST00000058534 2997 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
Ptchd3Q0EEE2 Ppp2r2d-207ENSMUST00000155672 1938 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
Ptchd3Q0EEE2 Taf6l-212ENSMUST00000177216 2167 ntAPPRIS P1 TSL 5 BASIC16.02■□□□□ 0.15
Ptchd3Q0EEE2 Chtf8-206ENSMUST00000177068 2931 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Ptchd3Q0EEE2 Atoh1-201ENSMUST00000101351 2121 ntAPPRIS P1 BASIC16.01■□□□□ 0.15
Ptchd3Q0EEE2 Hnrnpl-202ENSMUST00000172529 1898 ntTSL 5 BASIC16.01■□□□□ 0.15
Ptchd3Q0EEE2 Brpf1-202ENSMUST00000113119 4826 ntAPPRIS ALT2 TSL 1 (best) BASIC16.01■□□□□ 0.15
Ptchd3Q0EEE2 Htatsf1-201ENSMUST00000088652 2810 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Ptchd3Q0EEE2 Pou2f2-202ENSMUST00000108413 1599 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
Ptchd3Q0EEE2 Galnt13-203ENSMUST00000112635 7531 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Ptchd3Q0EEE2 Bicd2-201ENSMUST00000048544 6309 ntAPPRIS P4 TSL 1 (best) BASIC16.01■□□□□ 0.15
Ptchd3Q0EEE2 Cog8-201ENSMUST00000034391 2954 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Ptchd3Q0EEE2 Foxc2-201ENSMUST00000054691 2725 ntAPPRIS P1 BASIC16.01■□□□□ 0.15
Ptchd3Q0EEE2 Tmem229b-201ENSMUST00000056660 3860 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Ptchd3Q0EEE2 Lrch3-210ENSMUST00000170201 2902 ntAPPRIS ALT2 TSL 1 (best) BASIC16.01■□□□□ 0.15
Ptchd3Q0EEE2 Pacs1-201ENSMUST00000025786 4339 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Ptchd3Q0EEE2 Atp23-202ENSMUST00000168520 1043 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Ptchd3Q0EEE2 Sufu-202ENSMUST00000111867 1747 ntAPPRIS ALT1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Ptchd3Q0EEE2 2810408A11Rik-201ENSMUST00000018714 1485 ntAPPRIS ALT2 TSL 1 (best) BASIC16.01■□□□□ 0.15
Ptchd3Q0EEE2 Dmpk-202ENSMUST00000108473 2588 ntAPPRIS ALT2 TSL 1 (best) BASIC16.01■□□□□ 0.15
Ptchd3Q0EEE2 Stxbp6-201ENSMUST00000053768 4553 ntAPPRIS P1 TSL 5 BASIC16.01■□□□□ 0.15
Ptchd3Q0EEE2 Gm16201-202ENSMUST00000139218 2330 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
Ptchd3Q0EEE2 Inppl1-201ENSMUST00000035836 4995 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Ptchd3Q0EEE2 Capg-202ENSMUST00000114071 1400 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Ptchd3Q0EEE2 Tlcd1-204ENSMUST00000127587 1412 ntAPPRIS P3 TSL 1 (best) BASIC16.01■□□□□ 0.15
Ptchd3Q0EEE2 Pprc1-203ENSMUST00000111899 5246 ntAPPRIS P2 TSL 1 (best) BASIC16.01■□□□□ 0.15
Ptchd3Q0EEE2 Exoc8-201ENSMUST00000098312 4598 ntAPPRIS P1 BASIC16.01■□□□□ 0.15
Ptchd3Q0EEE2 Stk33-201ENSMUST00000090414 2221 ntAPPRIS P1 TSL 5 BASIC16■□□□□ 0.15
Ptchd3Q0EEE2 Thsd7a-202ENSMUST00000119581 5678 ntAPPRIS P2 TSL 5 BASIC16■□□□□ 0.15
Ptchd3Q0EEE2 Trp73-203ENSMUST00000105643 1916 ntAPPRIS ALT2 TSL 5 BASIC16■□□□□ 0.15
Ptchd3Q0EEE2 Mccc1-201ENSMUST00000029259 2455 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Ptchd3Q0EEE2 Klhl29-201ENSMUST00000020958 7041 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Ptchd3Q0EEE2 Zfp467-209ENSMUST00000114566 543 ntTSL 3 BASIC16■□□□□ 0.15
Ptchd3Q0EEE2 Gm15378-201ENSMUST00000121894 207 ntBASIC16■□□□□ 0.15
Ptchd3Q0EEE2 2900072N19Rik-201ENSMUST00000123840 806 ntTSL 1 (best) BASIC16■□□□□ 0.15
Ptchd3Q0EEE2 Ccdc58-202ENSMUST00000163352 970 ntTSL 3 BASIC16■□□□□ 0.15
Ptchd3Q0EEE2 Ccdc58-203ENSMUST00000164916 1096 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Ptchd3Q0EEE2 Anapc13-204ENSMUST00000190279 589 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Ptchd3Q0EEE2 Cebpg-201ENSMUST00000070191 914 ntAPPRIS P1 TSL 2 BASIC16■□□□□ 0.15
Ptchd3Q0EEE2 Syngr1-202ENSMUST00000009728 819 ntAPPRIS ALT2 TSL 1 (best) BASIC16■□□□□ 0.15
Ptchd3Q0EEE2 Casp3-204ENSMUST00000211115 2601 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Ptchd3Q0EEE2 Aifm1-201ENSMUST00000037349 2237 ntAPPRIS P3 TSL 1 (best) BASIC16■□□□□ 0.15
Ptchd3Q0EEE2 Gm6583-201ENSMUST00000051117 2233 ntAPPRIS P1 BASIC16■□□□□ 0.15
Ptchd3Q0EEE2 Bcor-202ENSMUST00000065143 6839 ntAPPRIS P4 TSL 1 (best) BASIC16■□□□□ 0.15
Ptchd3Q0EEE2 Slc29a4-201ENSMUST00000058418 2789 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Ptchd3Q0EEE2 Eif4h-201ENSMUST00000036125 2367 ntAPPRIS ALT1 TSL 1 (best) BASIC16■□□□□ 0.15
Ptchd3Q0EEE2 Gm9821-201ENSMUST00000178895 1953 ntAPPRIS P1 BASIC16■□□□□ 0.15
Ptchd3Q0EEE2 Tmem267-205ENSMUST00000223912 1789 ntAPPRIS P1 BASIC16■□□□□ 0.15
Ptchd3Q0EEE2 Msl1-201ENSMUST00000037915 4593 ntAPPRIS P2 TSL 1 (best) BASIC16■□□□□ 0.15
Ptchd3Q0EEE2 Alox12-202ENSMUST00000108574 2314 ntTSL 1 (best) BASIC16■□□□□ 0.15
Ptchd3Q0EEE2 0610010F05Rik-203ENSMUST00000109532 4106 ntAPPRIS P2 TSL 5 BASIC16■□□□□ 0.15
Ptchd3Q0EEE2 Bcor-203ENSMUST00000115512 6887 ntAPPRIS ALT2 TSL 1 (best) BASIC16■□□□□ 0.15
Ptchd3Q0EEE2 Wnt8b-201ENSMUST00000041163 3376 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Ptchd3Q0EEE2 Lgr6-202ENSMUST00000137968 2820 ntTSL 1 (best) BASIC16■□□□□ 0.15
Ptchd3Q0EEE2 Adamts17-202ENSMUST00000107478 6416 ntAPPRIS ALT2 TSL 5 BASIC15.99■□□□□ 0.15
Ptchd3Q0EEE2 Dtx2-202ENSMUST00000111142 2650 ntAPPRIS ALT2 TSL 1 (best) BASIC15.99■□□□□ 0.15
Ptchd3Q0EEE2 Pex12-205ENSMUST00000175741 2337 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Ptchd3Q0EEE2 Snip1-201ENSMUST00000052183 2345 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Ptchd3Q0EEE2 Arid3b-202ENSMUST00000098686 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC15.99■□□□□ 0.15
Ptchd3Q0EEE2 Zfx-204ENSMUST00000113927 6933 ntAPPRIS P1 TSL 5 BASIC15.99■□□□□ 0.15
Ptchd3Q0EEE2 Unc50-203ENSMUST00000118059 1179 ntAPPRIS P1 TSL 5 BASIC15.99■□□□□ 0.15
Ptchd3Q0EEE2 Smim1-212ENSMUST00000146543 839 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
Ptchd3Q0EEE2 Aprt-204ENSMUST00000212093 723 ntTSL 2 BASIC15.99■□□□□ 0.15
Ptchd3Q0EEE2 Ly6g6d-201ENSMUST00000007259 546 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Ptchd3Q0EEE2 Klhdc10-201ENSMUST00000068240 3951 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
Ptchd3Q0EEE2 AC093043.3-201ENSMUST00000226531 2273 ntBASIC15.99■□□□□ 0.15
Ptchd3Q0EEE2 Ifitm10-201ENSMUST00000059223 3412 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
Ptchd3Q0EEE2 Mapt-202ENSMUST00000106988 2202 ntAPPRIS ALT2 TSL 5 BASIC15.99■□□□□ 0.15
Ptchd3Q0EEE2 Kbtbd2-202ENSMUST00000114323 3816 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Ptchd3Q0EEE2 Sash1-201ENSMUST00000015449 7183 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Ptchd3Q0EEE2 Slco3a1-201ENSMUST00000026897 4589 ntAPPRIS P4 TSL 1 (best) BASIC15.99■□□□□ 0.15
Ptchd3Q0EEE2 Gata5-201ENSMUST00000015771 3277 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Ptchd3Q0EEE2 Slc25a31-201ENSMUST00000091184 2128 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Ptchd3Q0EEE2 Usp43-202ENSMUST00000108677 4447 ntAPPRIS ALT2 TSL 1 (best) BASIC15.98■□□□□ 0.15
Ptchd3Q0EEE2 Prkra-201ENSMUST00000002808 1614 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Ptchd3Q0EEE2 Farsa-202ENSMUST00000109754 1795 ntAPPRIS ALT1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Ptchd3Q0EEE2 Nr1h2-213ENSMUST00000167197 1944 ntAPPRIS P3 TSL 5 BASIC15.98■□□□□ 0.15
Ptchd3Q0EEE2 Nrip1-201ENSMUST00000054178 4529 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Ptchd3Q0EEE2 Otp-201ENSMUST00000022195 2656 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Ptchd3Q0EEE2 Ak3-201ENSMUST00000025696 2809 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Ptchd3Q0EEE2 Icam2-201ENSMUST00000001055 1282 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Ptchd3Q0EEE2 Ctnnal1-202ENSMUST00000107612 850 ntTSL 3 BASIC15.98■□□□□ 0.15
Ptchd3Q0EEE2 Bex3-202ENSMUST00000113112 826 ntAPPRIS ALT2 TSL 1 (best) BASIC15.98■□□□□ 0.15
Ptchd3Q0EEE2 Nudt22-203ENSMUST00000180765 1073 ntAPPRIS P1 TSL 5 BASIC15.98■□□□□ 0.15
Ptchd3Q0EEE2 Gm44899-201ENSMUST00000207451 391 ntTSL 3 BASIC15.98■□□□□ 0.15
Ptchd3Q0EEE2 Cdk2ap2-201ENSMUST00000025779 1080 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Ptchd3Q0EEE2 Chpf-201ENSMUST00000079205 2892 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Ptchd3Q0EEE2 Gnal-201ENSMUST00000025402 5616 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
Ptchd3Q0EEE2 Mri1-203ENSMUST00000126435 2819 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Ptchd3Q0EEE2 Rasgrp1-207ENSMUST00000178884 5104 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Ptchd3Q0EEE2 Men1-205ENSMUST00000113501 2508 ntTSL 5 BASIC15.98■□□□□ 0.15
Ptchd3Q0EEE2 Xrcc1-205ENSMUST00000205573 2528 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Ptchd3Q0EEE2 Slc39a7-201ENSMUST00000025186 2244 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Ptchd3Q0EEE2 Serf2-204ENSMUST00000139253 3056 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Ptchd3Q0EEE2 Ubr2-202ENSMUST00000113337 7633 ntAPPRIS P3 TSL 1 (best) BASIC15.98■□□□□ 0.15
Ptchd3Q0EEE2 2810408A11Rik-203ENSMUST00000102580 1640 ntAPPRIS P3 TSL 1 (best) BASIC15.97■□□□□ 0.15
Retrieved 100 of 76,532 protein–RNA pairs in 17.2 ms