Protein–RNA interactions for Protein: P59108

Cpne2, Copine-2, mousemouse

Predictions only

Length 548 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cpne2P59108 Igsf23-201ENSMUST00000043440 1908 ntAPPRIS P2 TSL 1 (best) BASIC14.02□□□□□ -0.16
Cpne2P59108 Tspan10-201ENSMUST00000044105 1680 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Cpne2P59108 Wipf3-204ENSMUST00000132855 4516 ntAPPRIS P4 TSL 5 BASIC14.02□□□□□ -0.16
Cpne2P59108 Rhod-202ENSMUST00000117462 1495 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
Cpne2P59108 Tex264-203ENSMUST00000169068 1364 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Cpne2P59108 Gm13216-201ENSMUST00000117145 591 ntBASIC14.02□□□□□ -0.17
Cpne2P59108 Jtb-202ENSMUST00000119304 878 ntTSL 3 BASIC14.02□□□□□ -0.17
Cpne2P59108 Nudt8-203ENSMUST00000122924 1082 ntTSL 2 BASIC14.02□□□□□ -0.17
Cpne2P59108 Mrpl52-204ENSMUST00000199195 463 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Cpne2P59108 Gm44210-201ENSMUST00000205253 713 ntTSL 3 BASIC14.02□□□□□ -0.17
Cpne2P59108 Crybb1-201ENSMUST00000031286 882 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Cpne2P59108 Gpsm1-202ENSMUST00000066936 3384 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.17
Cpne2P59108 Mmd-201ENSMUST00000004050 2677 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Cpne2P59108 Kctd15-203ENSMUST00000108070 2409 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Cpne2P59108 Paxbp1-202ENSMUST00000118522 3973 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Cpne2P59108 Rbpms-201ENSMUST00000033994 2375 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Cpne2P59108 Kdm7a-201ENSMUST00000002305 9566 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Cpne2P59108 Sox13-205ENSMUST00000153799 3693 ntAPPRIS P2 TSL 1 (best) BASIC14.02□□□□□ -0.17
Cpne2P59108 Agfg1-205ENSMUST00000187899 2078 ntTSL 5 BASIC14.02□□□□□ -0.17
Cpne2P59108 Nfkbid-202ENSMUST00000108175 2000 ntAPPRIS P2 TSL 1 (best) BASIC14.02□□□□□ -0.17
Cpne2P59108 Pi4k2b-202ENSMUST00000031082 3034 ntAPPRIS ALT2 TSL 2 BASIC14.01□□□□□ -0.17
Cpne2P59108 Ecel1-203ENSMUST00000160810 2898 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Cpne2P59108 Haspin-201ENSMUST00000052140 2810 ntAPPRIS P1 BASIC14.01□□□□□ -0.17
Cpne2P59108 Tmem229b-201ENSMUST00000056660 3860 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Cpne2P59108 Fam8a1-201ENSMUST00000099547 3664 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Cpne2P59108 Synm-204ENSMUST00000208231 4457 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Cpne2P59108 Tbx21-201ENSMUST00000001484 2488 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Cpne2P59108 Slc16a6-202ENSMUST00000070152 4219 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
Cpne2P59108 Magi1-208ENSMUST00000204347 7929 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Cpne2P59108 Paqr3-201ENSMUST00000069453 1375 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Cpne2P59108 Zbtb11-201ENSMUST00000050248 4920 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
Cpne2P59108 Selenos-201ENSMUST00000101801 1191 ntAPPRIS P2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Cpne2P59108 Gm11643-201ENSMUST00000119578 864 ntBASIC14.01□□□□□ -0.17
Cpne2P59108 Zfp428-203ENSMUST00000177205 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Cpne2P59108 Gng10-201ENSMUST00000041160 1192 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Cpne2P59108 4930505A04Rik-201ENSMUST00000041763 904 ntAPPRIS P1 TSL 2 BASIC14.01□□□□□ -0.17
Cpne2P59108 Apba3-201ENSMUST00000057798 2106 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Cpne2P59108 Gpam-201ENSMUST00000061856 3832 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Cpne2P59108 5031425F14Rik-201ENSMUST00000127920 2098 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Cpne2P59108 Reps2-202ENSMUST00000112334 7675 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Cpne2P59108 Sik2-201ENSMUST00000041375 3552 ntAPPRIS P2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Cpne2P59108 Nxnl1-201ENSMUST00000048243 2285 ntAPPRIS P1 TSL 2 BASIC14.01□□□□□ -0.17
Cpne2P59108 Nagpa-203ENSMUST00000147567 2230 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
Cpne2P59108 Arhgef18-201ENSMUST00000004684 5271 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Cpne2P59108 Pcdha1-201ENSMUST00000070797 5248 ntAPPRIS P2 TSL 1 (best) BASIC14□□□□□ -0.17
Cpne2P59108 Kif21a-203ENSMUST00000100304 6439 ntAPPRIS ALT2 TSL 5 BASIC14□□□□□ -0.17
Cpne2P59108 Kif21a-202ENSMUST00000088614 6439 ntAPPRIS ALT2 TSL 5 BASIC14□□□□□ -0.17
Cpne2P59108 Tmem28-201ENSMUST00000096363 3909 ntAPPRIS P1 TSL 5 BASIC14□□□□□ -0.17
Cpne2P59108 Stxbp1-201ENSMUST00000050000 3892 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Cpne2P59108 Tor1aip2-205ENSMUST00000111757 6118 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Cpne2P59108 Snx8-201ENSMUST00000031539 2627 ntAPPRIS P2 TSL 1 (best) BASIC14□□□□□ -0.17
Cpne2P59108 Nadk-203ENSMUST00000105613 3152 ntAPPRIS P2 TSL 1 (best) BASIC14□□□□□ -0.17
Cpne2P59108 Desi2-201ENSMUST00000027783 8802 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Cpne2P59108 Slc29a1-202ENSMUST00000064889 1988 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
Cpne2P59108 Ocrl-201ENSMUST00000001202 5253 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Cpne2P59108 Pcdha5-201ENSMUST00000192168 5206 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Cpne2P59108 Gm19531-201ENSMUST00000216737 1377 ntTSL 1 (best) BASIC14□□□□□ -0.17
Cpne2P59108 Arap3-201ENSMUST00000042944 5224 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Cpne2P59108 Rab10-201ENSMUST00000021001 3513 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Cpne2P59108 Tmem125-201ENSMUST00000060214 1864 ntAPPRIS P1 TSL 2 BASIC14□□□□□ -0.17
Cpne2P59108 Rcc1-203ENSMUST00000105951 2326 ntAPPRIS P1 TSL 5 BASIC14□□□□□ -0.17
Cpne2P59108 Mir2861-201ENSMUST00000175539 82 ntBASIC14□□□□□ -0.17
Cpne2P59108 Gm34933-201ENSMUST00000203245 1067 ntTSL 5 BASIC14□□□□□ -0.17
Cpne2P59108 Cmtm7-204ENSMUST00000216760 665 ntTSL 1 (best) BASIC14□□□□□ -0.17
Cpne2P59108 Mtag2-201ENSMUST00000058665 714 ntBASIC14□□□□□ -0.17
Cpne2P59108 1700067K01Rik-201ENSMUST00000060357 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
Cpne2P59108 Gna13-201ENSMUST00000020930 6160 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Cpne2P59108 Six1-201ENSMUST00000050029 3316 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Cpne2P59108 Txnrd2-215ENSMUST00000206151 2874 ntAPPRIS P2 TSL 5 BASIC14□□□□□ -0.17
Cpne2P59108 Arf1-202ENSMUST00000163300 1991 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Cpne2P59108 Aurkb-201ENSMUST00000021277 1950 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Cpne2P59108 Grin3b-201ENSMUST00000045085 3283 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Cpne2P59108 Axin1-202ENSMUST00000118904 2833 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
Cpne2P59108 Rprm-201ENSMUST00000100089 1460 ntAPPRIS P1 BASIC13.99□□□□□ -0.17
Cpne2P59108 Agbl5-213ENSMUST00000201917 3579 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Cpne2P59108 Cacna2d2-202ENSMUST00000085092 5183 ntAPPRIS P4 TSL 5 BASIC13.99□□□□□ -0.17
Cpne2P59108 Gpr37l1-201ENSMUST00000027682 2269 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Cpne2P59108 Cdc123-201ENSMUST00000043864 1827 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Cpne2P59108 Ccnl1-201ENSMUST00000029416 2169 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Cpne2P59108 Sh3yl1-201ENSMUST00000020997 1750 ntAPPRIS P3 TSL 1 (best) BASIC13.99□□□□□ -0.17
Cpne2P59108 Nfkb1-201ENSMUST00000029812 4117 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Cpne2P59108 Abcb4-201ENSMUST00000003717 4079 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Cpne2P59108 Fancm-201ENSMUST00000058889 7775 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Cpne2P59108 Espn-212ENSMUST00000105658 2815 ntAPPRIS ALT2 TSL 5 BASIC13.99□□□□□ -0.17
Cpne2P59108 Gtpbp3-201ENSMUST00000007754 2800 ntAPPRIS P2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Cpne2P59108 Tcp1-209ENSMUST00000151287 2446 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Cpne2P59108 Mrpl52-201ENSMUST00000010550 418 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Cpne2P59108 Arl2bp-202ENSMUST00000109527 1133 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Cpne2P59108 Gm12216-203ENSMUST00000121435 655 ntAPPRIS ALT2 TSL 5 BASIC13.99□□□□□ -0.17
Cpne2P59108 Rell2-204ENSMUST00000163591 1057 ntTSL 5 BASIC13.99□□□□□ -0.17
Cpne2P59108 Mir6349-201ENSMUST00000184059 97 ntBASIC13.99□□□□□ -0.17
Cpne2P59108 1110004E09Rik-201ENSMUST00000023694 1143 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Cpne2P59108 5033430I15Rik-201ENSMUST00000038032 729 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Cpne2P59108 Oxld1-201ENSMUST00000044007 813 ntAPPRIS P2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Cpne2P59108 Bex2-201ENSMUST00000049130 903 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Cpne2P59108 Mrps10-201ENSMUST00000060752 1109 ntTSL 5 BASIC13.99□□□□□ -0.17
Cpne2P59108 Ing1-202ENSMUST00000209565 1971 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Cpne2P59108 Col5a3-201ENSMUST00000004201 6119 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Cpne2P59108 Dmpk-202ENSMUST00000108473 2588 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Cpne2P59108 Ntrk1-201ENSMUST00000029712 2588 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Retrieved 100 of 76,532 protein–RNA pairs in 50.2 ms