Protein–RNA interactions for Protein: P58771

Tpm1, Tropomyosin alpha-1 chain, mousemouse

Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tpm1P58771 Zkscan2-203ENSMUST00000128217 2218 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Tpm1P58771 Ttc13-203ENSMUST00000118134 3277 ntTSL 5 BASIC18.51■□□□□ 0.55
Tpm1P58771 Cacna2d2-202ENSMUST00000085092 5183 ntAPPRIS P4 TSL 5 BASIC18.51■□□□□ 0.55
Tpm1P58771 Ankrd13a-201ENSMUST00000102578 3717 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Tpm1P58771 Anks6-201ENSMUST00000084616 3552 ntAPPRIS P1 TSL 5 BASIC18.51■□□□□ 0.55
Tpm1P58771 Taf10-203ENSMUST00000141116 4281 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Tpm1P58771 Prpf3-207ENSMUST00000161476 2732 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Tpm1P58771 Cask-204ENSMUST00000115438 8366 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Tpm1P58771 Wac-215ENSMUST00000171042 2205 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Tpm1P58771 Rab7-203ENSMUST00000113597 1859 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Tpm1P58771 Nr1h2-203ENSMUST00000107911 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
Tpm1P58771 Dab2ip-202ENSMUST00000091010 6455 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
Tpm1P58771 Plxnc1-201ENSMUST00000099337 7302 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Tpm1P58771 Pde1c-203ENSMUST00000164037 3068 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Tpm1P58771 Gm11273-201ENSMUST00000044043 390 ntAPPRIS P1 BASIC18.5■□□□□ 0.55
Tpm1P58771 Rilpl2-201ENSMUST00000031347 1391 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Tpm1P58771 Mid1ip1-202ENSMUST00000115524 2022 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Tpm1P58771 Slc35a1-201ENSMUST00000029970 2039 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Tpm1P58771 Rprm-201ENSMUST00000100089 1460 ntAPPRIS P1 BASIC18.5■□□□□ 0.55
Tpm1P58771 Tlnrd1-201ENSMUST00000094216 4433 ntAPPRIS P1 BASIC18.5■□□□□ 0.55
Tpm1P58771 Mettl27-204ENSMUST00000111219 1790 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Tpm1P58771 Ccdc88b-201ENSMUST00000113440 4959 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Tpm1P58771 G3bp2-204ENSMUST00000169094 2716 ntAPPRIS P3 TSL 1 (best) BASIC18.5■□□□□ 0.55
Tpm1P58771 Tfap2a-206ENSMUST00000224665 1958 ntAPPRIS ALT1 BASIC18.5■□□□□ 0.55
Tpm1P58771 Pank3-201ENSMUST00000018990 7376 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Tpm1P58771 Ppp2r1b-204ENSMUST00000174628 2195 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Tpm1P58771 Hnrnpll-201ENSMUST00000061331 3116 ntAPPRIS P1 TSL 5 BASIC18.49■□□□□ 0.55
Tpm1P58771 Fam181a-201ENSMUST00000179363 1406 ntAPPRIS P1 TSL 2 BASIC18.49■□□□□ 0.55
Tpm1P58771 Mdm1-204ENSMUST00000169817 2022 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
Tpm1P58771 Syn1-201ENSMUST00000081893 3209 ntAPPRIS P4 TSL 5 BASIC18.49■□□□□ 0.55
Tpm1P58771 Gm3807-201ENSMUST00000193520 1168 ntBASIC18.49■□□□□ 0.55
Tpm1P58771 AC163280.1-201ENSMUST00000228194 1100 ntBASIC18.49■□□□□ 0.55
Tpm1P58771 Akt2-214ENSMUST00000167435 2865 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Tpm1P58771 Gm19430-201ENSMUST00000193847 2137 ntBASIC18.49■□□□□ 0.55
Tpm1P58771 Nek1-202ENSMUST00000120689 5478 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
Tpm1P58771 4930432B10Rik-202ENSMUST00000181330 1612 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Tpm1P58771 Cadps2-202ENSMUST00000069074 3935 ntTSL 5 BASIC18.48■□□□□ 0.55
Tpm1P58771 Seh1l-201ENSMUST00000025421 3516 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Tpm1P58771 Fhl2-201ENSMUST00000008280 1563 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Tpm1P58771 Tal1-201ENSMUST00000030489 4213 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Tpm1P58771 Gm12933-201ENSMUST00000120203 872 ntBASIC18.48■□□□□ 0.55
Tpm1P58771 Ccdc58-202ENSMUST00000163352 970 ntTSL 3 BASIC18.48■□□□□ 0.55
Tpm1P58771 Ccdc58-203ENSMUST00000164916 1096 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Tpm1P58771 Gm28914-201ENSMUST00000188115 667 ntTSL 2 BASIC18.48■□□□□ 0.55
Tpm1P58771 Gm36210-201ENSMUST00000210663 1279 ntAPPRIS P1 TSL 5 BASIC18.48■□□□□ 0.55
Tpm1P58771 Fam160a2-203ENSMUST00000118726 2855 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
Tpm1P58771 Tmem117-201ENSMUST00000080141 2781 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Tpm1P58771 Pitpnm2-209ENSMUST00000161938 5866 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
Tpm1P58771 Impad1-201ENSMUST00000084949 6543 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Tpm1P58771 Slc8b1-202ENSMUST00000076051 2661 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
Tpm1P58771 Hnrnpl-202ENSMUST00000172529 1898 ntTSL 5 BASIC18.48■□□□□ 0.55
Tpm1P58771 Zfp648-201ENSMUST00000086195 1892 ntAPPRIS P1 TSL 3 BASIC18.48■□□□□ 0.55
Tpm1P58771 Grm4-201ENSMUST00000118161 4537 ntAPPRIS P1 TSL 5 BASIC18.48■□□□□ 0.55
Tpm1P58771 Fam71e1-202ENSMUST00000205359 1307 ntAPPRIS ALT2 TSL 2 BASIC18.48■□□□□ 0.55
Tpm1P58771 Foxo3-201ENSMUST00000056974 2889 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Tpm1P58771 Dmpk-202ENSMUST00000108473 2588 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
Tpm1P58771 Osbpl1a-205ENSMUST00000119512 1947 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
Tpm1P58771 9530080O11Rik-201ENSMUST00000137239 1475 ntTSL 2 BASIC18.47■□□□□ 0.55
Tpm1P58771 Letm2-208ENSMUST00000210616 2974 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
Tpm1P58771 St6gal2-201ENSMUST00000025000 6066 ntAPPRIS P1 TSL 5 BASIC18.47■□□□□ 0.55
Tpm1P58771 Chpf-201ENSMUST00000079205 2892 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Tpm1P58771 Gm13158-201ENSMUST00000122007 736 ntBASIC18.47■□□□□ 0.55
Tpm1P58771 Gm27405-201ENSMUST00000184201 112 ntBASIC18.47■□□□□ 0.55
Tpm1P58771 Gng10-201ENSMUST00000041160 1192 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Tpm1P58771 Bex2-201ENSMUST00000049130 903 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Tpm1P58771 1700067K01Rik-201ENSMUST00000060357 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
Tpm1P58771 Rtl8b-201ENSMUST00000088778 1232 ntAPPRIS P1 BASIC18.47■□□□□ 0.55
Tpm1P58771 Crb3-202ENSMUST00000097299 1206 ntAPPRIS P3 TSL 1 (best) BASIC18.47■□□□□ 0.55
Tpm1P58771 Btaf1-201ENSMUST00000099494 7204 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Tpm1P58771 Shroom3-203ENSMUST00000113055 6765 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Tpm1P58771 Aifm1-201ENSMUST00000037349 2237 ntAPPRIS P3 TSL 1 (best) BASIC18.47■□□□□ 0.55
Tpm1P58771 Ccdc126-201ENSMUST00000055559 2351 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Tpm1P58771 Aifm2-201ENSMUST00000067857 1442 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Tpm1P58771 Coro1a-201ENSMUST00000032949 1660 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Tpm1P58771 Rbm12b2-202ENSMUST00000095143 3147 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Tpm1P58771 Htr5b-201ENSMUST00000055884 1935 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Tpm1P58771 Cox18-201ENSMUST00000048363 1333 ntAPPRIS P3 TSL 1 (best) BASIC18.47■□□□□ 0.55
Tpm1P58771 Slc32a1-201ENSMUST00000045738 2797 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Tpm1P58771 Tcf3-207ENSMUST00000105343 2920 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.55
Tpm1P58771 Sufu-202ENSMUST00000111867 1747 ntAPPRIS ALT1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Tpm1P58771 Anks1-203ENSMUST00000114842 5610 ntAPPRIS P3 TSL 1 (best) BASIC18.46■□□□□ 0.55
Tpm1P58771 Cerkl-205ENSMUST00000143974 1623 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Tpm1P58771 1700034J05Rik-202ENSMUST00000111622 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.55
Tpm1P58771 Gm12896-201ENSMUST00000118430 226 ntBASIC18.46■□□□□ 0.55
Tpm1P58771 Ndufa12-204ENSMUST00000179990 566 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
Tpm1P58771 4930554G22Rik-201ENSMUST00000196102 686 ntBASIC18.46■□□□□ 0.55
Tpm1P58771 Tmem192-201ENSMUST00000026595 1122 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Tpm1P58771 Rbks-201ENSMUST00000031018 1042 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Tpm1P58771 Vps37d-202ENSMUST00000076203 1286 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
Tpm1P58771 Comp-201ENSMUST00000003659 2416 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Tpm1P58771 Rnf111-201ENSMUST00000034739 4880 ntAPPRIS P2 TSL 1 (best) BASIC18.46■□□□□ 0.55
Tpm1P58771 2510009E07Rik-201ENSMUST00000053336 5164 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Tpm1P58771 Kifc3-212ENSMUST00000213004 2453 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.55
Tpm1P58771 AC133083.1-201ENSMUST00000221736 2209 ntBASIC18.46■□□□□ 0.55
Tpm1P58771 C130026I21Rik-201ENSMUST00000064341 1561 ntAPPRIS P3 TSL 1 (best) BASIC18.46■□□□□ 0.55
Tpm1P58771 Golim4-201ENSMUST00000038563 5546 ntAPPRIS P3 TSL 1 (best) BASIC18.46■□□□□ 0.55
Tpm1P58771 Epb41l1-204ENSMUST00000103137 6490 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Tpm1P58771 Lhx8-205ENSMUST00000205251 1729 ntAPPRIS P1 TSL 5 BASIC18.46■□□□□ 0.55
Tpm1P58771 Pid1-201ENSMUST00000168574 2664 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.54
Tpm1P58771 Kif17-204ENSMUST00000105821 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.54
Retrieved 100 of 76,532 protein–RNA pairs in 29.4 ms