Protein–RNA interactions for Protein: P52946

Pdx1, Pancreas/duodenum homeobox protein 1, mousemouse

Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pdx1P52946 Gm6659-201ENSMUST00000174752 547 ntBASIC16.37■□□□□ 0.21
Pdx1P52946 Gm20033-201ENSMUST00000180470 572 ntTSL 3 BASIC16.37■□□□□ 0.21
Pdx1P52946 Ndufs7-201ENSMUST00000020361 758 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Pdx1P52946 Rln3-201ENSMUST00000061923 634 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Pdx1P52946 Sgpp1-201ENSMUST00000021450 3323 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Pdx1P52946 Krt84-201ENSMUST00000023720 2570 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Pdx1P52946 Saysd1-201ENSMUST00000059666 2315 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Pdx1P52946 Impdh1-202ENSMUST00000159124 2600 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Pdx1P52946 Map3k10-202ENSMUST00000108341 3403 ntAPPRIS ALT2 TSL 5 BASIC16.37■□□□□ 0.21
Pdx1P52946 Psip1-201ENSMUST00000030207 3251 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Pdx1P52946 Dab2-208ENSMUST00000160134 1374 ntAPPRIS ALT2 TSL 5 BASIC16.37■□□□□ 0.21
Pdx1P52946 Adam22-201ENSMUST00000046838 2773 ntAPPRIS P3 TSL 1 (best) BASIC16.37■□□□□ 0.21
Pdx1P52946 Cdc14b-203ENSMUST00000109770 3052 ntAPPRIS P3 TSL 1 (best) BASIC16.37■□□□□ 0.21
Pdx1P52946 Hoxd4-201ENSMUST00000047904 2560 ntAPPRIS P1 TSL 5 BASIC16.36■□□□□ 0.21
Pdx1P52946 Gps1-207ENSMUST00000172809 2000 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
Pdx1P52946 Dag1-201ENSMUST00000080435 4364 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Pdx1P52946 Dnlz-201ENSMUST00000028295 2916 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Pdx1P52946 Dusp14-205ENSMUST00000164891 1454 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Pdx1P52946 Rassf1-204ENSMUST00000122225 1783 ntTSL 5 BASIC16.36■□□□□ 0.21
Pdx1P52946 Slc25a20-201ENSMUST00000035222 1783 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Pdx1P52946 Rassf1-202ENSMUST00000093786 1787 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Pdx1P52946 Csnk1e-201ENSMUST00000117786 2694 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Pdx1P52946 Uso1-201ENSMUST00000031355 3898 ntAPPRIS P2 TSL 1 (best) BASIC16.36■□□□□ 0.21
Pdx1P52946 Dach1-201ENSMUST00000069334 5063 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
Pdx1P52946 Plekhh3-206ENSMUST00000164474 3010 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
Pdx1P52946 Tead3-205ENSMUST00000154873 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
Pdx1P52946 Shisa2-201ENSMUST00000053949 3119 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Pdx1P52946 Atp6v1b1-206ENSMUST00000206911 1591 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
Pdx1P52946 Asnsd1-202ENSMUST00000123519 983 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
Pdx1P52946 BC048679-203ENSMUST00000207871 567 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
Pdx1P52946 Gm10358-201ENSMUST00000212864 1250 ntAPPRIS P1 BASIC16.36■□□□□ 0.21
Pdx1P52946 Kiss1r-202ENSMUST00000219745 979 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
Pdx1P52946 Mtnr1b-201ENSMUST00000057920 1095 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Pdx1P52946 Cdkn2c-201ENSMUST00000063531 1106 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Pdx1P52946 Rad51d-203ENSMUST00000092844 1228 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
Pdx1P52946 Nsmf-207ENSMUST00000116574 2863 ntTSL 5 BASIC16.36■□□□□ 0.21
Pdx1P52946 Apaf1-208ENSMUST00000162618 5151 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
Pdx1P52946 Thegl-202ENSMUST00000117880 1641 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Pdx1P52946 Ptprj-204ENSMUST00000168621 7634 ntAPPRIS P4 TSL 1 (best) BASIC16.36■□□□□ 0.21
Pdx1P52946 Ltbp4-202ENSMUST00000108369 5377 ntAPPRIS ALT2 TSL 5 BASIC16.36■□□□□ 0.21
Pdx1P52946 Slc29a1-222ENSMUST00000171847 2033 ntAPPRIS P3 TSL 1 (best) BASIC16.36■□□□□ 0.21
Pdx1P52946 Sart3-201ENSMUST00000019118 4447 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Pdx1P52946 Ostf1-201ENSMUST00000025631 2726 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Pdx1P52946 Cacna1b-204ENSMUST00000102939 9736 ntAPPRIS ALT2 TSL 5 BASIC16.36■□□□□ 0.21
Pdx1P52946 Krt83-201ENSMUST00000023718 1756 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Pdx1P52946 Layn-201ENSMUST00000098782 1786 ntAPPRIS P2 TSL 5 BASIC16.36■□□□□ 0.21
Pdx1P52946 Rab7-203ENSMUST00000113597 1859 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Pdx1P52946 Atp8b1-201ENSMUST00000025482 6440 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Pdx1P52946 Ndufs2-202ENSMUST00000111318 1545 ntTSL 5 BASIC16.35■□□□□ 0.21
Pdx1P52946 Mfsd4b1-201ENSMUST00000163705 2677 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Pdx1P52946 Ppp3cb-206ENSMUST00000161989 2322 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Pdx1P52946 Rhot2-201ENSMUST00000043897 3189 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Pdx1P52946 Lhfpl4-201ENSMUST00000162280 4762 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Pdx1P52946 Bcor-203ENSMUST00000115512 6887 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
Pdx1P52946 Fiz1-201ENSMUST00000077385 2546 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Pdx1P52946 Gm11860-201ENSMUST00000122346 1010 ntBASIC16.35■□□□□ 0.21
Pdx1P52946 Gm13025-201ENSMUST00000141469 1163 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Pdx1P52946 AC122351.1-201ENSMUST00000220467 126 ntBASIC16.35■□□□□ 0.21
Pdx1P52946 Mettl27-205ENSMUST00000111221 1796 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Pdx1P52946 Sh3gl2-203ENSMUST00000107188 2286 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Pdx1P52946 Gm18336-201ENSMUST00000180787 2298 ntAPPRIS P1 BASIC16.35■□□□□ 0.21
Pdx1P52946 Zbtb9-201ENSMUST00000120016 2798 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Pdx1P52946 Katnbl1-201ENSMUST00000028552 2886 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Pdx1P52946 Sarm1-202ENSMUST00000108287 4868 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Pdx1P52946 Alcam-201ENSMUST00000023312 6036 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Pdx1P52946 Phtf1-201ENSMUST00000055425 3060 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Pdx1P52946 Hps6-201ENSMUST00000099393 2696 ntAPPRIS P1 BASIC16.34■□□□□ 0.21
Pdx1P52946 G3bp2-204ENSMUST00000169094 2716 ntAPPRIS P3 TSL 1 (best) BASIC16.34■□□□□ 0.21
Pdx1P52946 Adck1-204ENSMUST00000222695 2253 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Pdx1P52946 Lhx6-203ENSMUST00000112963 3481 ntTSL 2 BASIC16.34■□□□□ 0.21
Pdx1P52946 Mycs-201ENSMUST00000058404 2368 ntAPPRIS P1 BASIC16.34■□□□□ 0.21
Pdx1P52946 Fam135a-201ENSMUST00000027337 5536 ntAPPRIS P2 TSL 5 BASIC16.34■□□□□ 0.21
Pdx1P52946 Lrrtm1-202ENSMUST00000159616 2541 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Pdx1P52946 Fbxo6-208ENSMUST00000168503 1240 ntAPPRIS P1 TSL 2 BASIC16.34■□□□□ 0.21
Pdx1P52946 Gm23634-201ENSMUST00000175071 91 ntBASIC16.34■□□□□ 0.21
Pdx1P52946 Gm28402-201ENSMUST00000188574 373 ntTSL 3 BASIC16.34■□□□□ 0.21
Pdx1P52946 Gm38282-201ENSMUST00000192751 695 ntTSL 5 BASIC16.34■□□□□ 0.21
Pdx1P52946 Atp5l-201ENSMUST00000043675 544 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Pdx1P52946 Pafah1b3-201ENSMUST00000005583 901 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Pdx1P52946 Nt5c1a-201ENSMUST00000068262 1220 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Pdx1P52946 C530025M09Rik-201ENSMUST00000099264 690 ntAPPRIS P1 BASIC16.34■□□□□ 0.21
Pdx1P52946 Hand1-201ENSMUST00000036917 1904 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Pdx1P52946 Plekha4-202ENSMUST00000209517 2577 ntAPPRIS P2 TSL 5 BASIC16.34■□□□□ 0.21
Pdx1P52946 Pqlc1-202ENSMUST00000091798 1989 ntAPPRIS P3 TSL 5 BASIC16.34■□□□□ 0.21
Pdx1P52946 Lcmt2-201ENSMUST00000099486 2047 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Pdx1P52946 Gm20517-202ENSMUST00000132397 4807 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Pdx1P52946 Tm6sf2-202ENSMUST00000110160 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Pdx1P52946 Naf1-201ENSMUST00000118009 2990 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Pdx1P52946 Snx16-201ENSMUST00000029047 2288 ntAPPRIS P3 TSL 1 (best) BASIC16.34■□□□□ 0.21
Pdx1P52946 D17Wsu92e-203ENSMUST00000114863 3828 ntAPPRIS P3 TSL 1 (best) BASIC16.34■□□□□ 0.21
Pdx1P52946 Npnt-202ENSMUST00000042744 4619 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
Pdx1P52946 Sdf4-203ENSMUST00000105578 1654 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Pdx1P52946 Mfsd4b3-201ENSMUST00000095749 1787 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
Pdx1P52946 Pole4-201ENSMUST00000095786 1769 ntAPPRIS P2 TSL 1 (best) BASIC16.33■□□□□ 0.21
Pdx1P52946 Ivns1abp-203ENSMUST00000111887 2783 ntTSL 1 (best) BASIC16.33■□□□□ 0.21
Pdx1P52946 Pard3-226ENSMUST00000162907 4682 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.21
Pdx1P52946 Nfe2-208ENSMUST00000149111 1878 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
Pdx1P52946 Sppl3-201ENSMUST00000031530 3204 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
Pdx1P52946 Neil3-201ENSMUST00000047768 2253 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Pdx1P52946 Col11a2-203ENSMUST00000114255 5722 ntAPPRIS ALT2 TSL 5 BASIC16.33■□□□□ 0.2
Retrieved 100 of 76,532 protein–RNA pairs in 19.6 ms